Paramisgurnus dabryanus (large-scale loach): 135773407
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Entry
135773407 CDS
T10799
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135773407 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135773407 (dhx36)
03012 Translation factors [BR:
pdab03012
]
135773407 (dhx36)
Enzymes [BR:
pdab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135773407 (dhx36)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135773407 (dhx36)
Translation factors [BR:
pdab03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135773407 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
AAA_14
ATPase
NB-ARC
DUF7428
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
135773407
NCBI-ProteinID:
XP_065139038
LinkDB
All DBs
Position
9:complement(11260516..11298846)
Genome browser
AA seq
1057 aa
AA seq
DB search
MSYGHGYGNRRGRRGGGRRFGDGSRWNRESGGGCQRSSEWESVEEQGHGGGRRVGKHPPH
LTGREIGLWYSKNGGFNRAEAERKSRAVVKMDASREQRITQLLNSVQRDAGRESLPSTSQ
SWRVKEEPNSRRSRDTESLPSTSQSWRVKEEPNSHRDADREPHPSLSHNWRVKEEPVSHS
YFDGDDPPDDPEIILKVPKIEPKEERQEDESGSSVRGELTDTDLDYLFQYVVQKPSLDEE
LKKDLQKKRDNHRYNDMLKFREKLPSYGMREELVRLIGANQVLVISGETGCGKTTQVTQF
ILDDYIQKGMGSLCRVVCTQPRRISAISVAERVAAERAETVGDGKSCGYQIRLQSRLPRK
QGSVLYCTTGIILQWLRSDPYLSSISHLVLDEIHERSLQSDVLLTIIKDLLRTRDDLKVV
LMSATLNAEKFSRYFNNCPMVHIPGYTFPVKEYLLEDVVEMLRFKPQHQPKQQRSRCRRN
FMRGKNMCPEKEQKEAEYSESWPTYARTLRDRYSDSTIDALELMDDDDKINLELIVALIR
HIVIYENDGAILVFLPGWDNISTLNDLLMADKMFRSDRFIIIPLHSLMPTVSQTQVFKKP
PAGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMTPEWVSLANAKQRK
GRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQIKILKLGSIASFLHKSLD
PPSDTAIGLAITHLIELNALDHNEELTPLGYHLARVPVEPHIGKMIIFGALLSCLDPVLT
IATSLSFKDPFIIPLGKEKIADNRRKILSRNTRSDHLTVVNAFWGWEDAKREGGRFEREY
CWENFLSANTLQMLQNMKGQFAEHLLATGFVNSKDPKDPTSNINSANEKLIKAVIVAGLY
PKVAKVRPSRIPKVYTKTEGRVYIHPKSVNAEEANFNYSWLIYHLKMRTTSIFLYDCTEV
SPFSLLFFGGDITIQKDEYQETIAVDEWIVFQSPARIAHLVKELRKELDVLLEEKIRRPR
PVDWNDRHSKDCAVISAIIDLITTQETPAGDARRDSQ
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggccatgggtatggtaacagacgcgggcgaagaggaggaggccggcgcttc
ggagatggatccaggtggaatagagagtctggaggaggatgccagagaagctctgaatgg
gagtcagtagaggagcaggggcatggaggaggacgaagagtcggcaaacacccaccccat
ctgacgggtcgcgaaattggattgtggtattccaaaaacggaggcttcaacagagccgag
gcagaaaggaaatcgagggctgttgttaagatggatgcatcgcgagagcagcgcatcact
cagttgctgaactcagtacaaagagatgcaggcagagagtctctaccctccacgtctcaa
agctggagggtgaaagaggagcccaacagccgaagaagtagagacacagaatctcttccc
tccacgtctcaaagctggcgagtaaaggaagaacccaacagccatagagatgcagacaga
gagcctcatccctccctgtctcacaactggagagtcaaagaggagccagtcagccacagt
tactttgatggagacgatcctccagatgatcctgaaatcattctgaaagttccaaaaatt
gagcccaaagaggagaggcaagaggatgagtctgggtcgagtgtaagaggagaactcact
gacactgatctggactacttatttcagtatgttgttcaaaaaccctctctggatgaggag
cttaagaaagatctgcagaagaaaagagataaccatagatacaatgatatgctgaaattc
agagaaaagcttccatcatatggaatgagagaggagctggttaggctgattggtgctaac
caggtactagtgatcagtggagagacaggatgtgggaagactacacaggttactcagttc
atccttgatgattatattcagaagggcatgggctctctctgcagggtggtatgcacccag
ccacggcgcatcagtgccatatcagtagcagagagagtagctgcagagcgggcagagacg
gtgggagatgggaagtcttgtgggtatcagattcgtttgcagagccggttaccacggaaa
caaggctcagtgttgtattgtacgacgggcattattcttcaatggctccgctcggatccg
tatctctccagcataagtcatctggtcctggatgagatccacgagaggagtcttcagtcg
gatgttctcctcaccatcataaaggacttgttgcgcactcgagatgacctcaaagtagtg
ctcatgagtgccacgcttaatgctgaaaaatttagcagatatttcaataactgccccatg
gtccatattcccggatacacatttcctgtgaaagagtatttactggaggatgtagtggaa
atgctgagattcaaaccacaacaccagccgaagcaacagcgatctcgctgcaggagaaac
tttatgcgcggcaagaacatgtgcccagagaaggagcagaaagaggctgagtacagtgag
agttggccaacctacgcccgcacgctcagagatcggtactcagacagcaccattgacgca
ctggagttgatggatgatgatgacaagattaatctggagcttatcgtggcattgatccgt
cacatcgtgatatatgagaatgatggagctattctagtgtttctgcctggttgggacaac
atcagcaccctgaatgatctgcttatggcagataagatgtttagatcagacaggtttata
atcatccccctccactctttgatgcccacggtctctcagactcaggtgttcaaaaagcca
ccggcgggagtgcgcaagattgtgattgctaccaacatcgcagaaaccagtatcacaata
gatgatgtggtttacgtgattgatggagggaagattaaagaaactcattttgacacccaa
aacaacatcagcaccatgactccggagtgggtgagcttagccaacgccaaacagaggaag
ggccgtgctggcagggtgtctccggggaaatgctaccacctgtataacggattgagggcc
agcctcctcgataactaccagctacccgagatccaacgcaccccactggaagagctttgc
ttgcaaattaagatcctgaaattaggctccattgcgtcattccttcacaaatctctggac
cctccatcagacacggcgataggtctggccatcacacacttgatagagctgaatgctctg
gatcacaatgaagagttgaccccattaggataccatctcgcccgtgtgccggtagagcct
cacattggaaaaatgattatatttggggctcttctgagctgtctggaccctgtgctaacc
atcgcaaccagccttagcttcaaagaccccttcatcataccgctggggaaagagaagatt
gcagacaacaggagaaaaatcctctccagaaacaccaggagtgatcatctcactgttgtc
aatgctttttggggctgggaggatgctaagagagagggcggtaggtttgagcgagagtac
tgctgggaaaacttcctatctgctaacacactacagatgcttcagaacatgaaagggcag
tttgcagagcatcttttggcaactgggtttgtaaatagcaaggacccgaaagatcccacc
tctaacataaactcagctaatgagaagctaataaaggcggtgatcgtagctggcctgtat
cctaaagttgccaaggtccgccccagtagaataccaaaggtgtacactaagactgaggga
agagtgtatatccaccctaaatctgttaatgcggaggaggctaacttcaactactcatgg
ctcatctatcacctgaagatgagaaccacaagtatcttcctgtatgactgcacagaggtc
tccccattttctctgctattttttggaggtgatattaccatacagaaggacgagtaccaa
gagaccattgctgttgatgaatggatcgtcttccagtccccggctcgcattgctcacctt
gttaaggaactgaggaaggagctggatgtgttgctggaggaaaagataaggagaccacga
cctgtggactggaatgaccgccactctaaagactgtgctgtcatctcggccatcattgac
ctcatcaccacacaggaaacccctgctggagatgccaggagagacagtcaatga
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