Paramisgurnus dabryanus (large-scale loach): 135773534
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Entry
135773534 CDS
T10799
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
135773534 (ctcf)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135773534 (ctcf)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135773534
NCBI-ProteinID:
XP_065139258
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Position
9:complement(23348490..23356368)
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AA seq
809 aa
AA seq
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MKYTFSVQVIPMEGGPTEAVVEEAGDAFKAKECKTYQRRREDEEVGAELLQAAGLEQVHT
EGEAVVTQQQLVEGVVNVNSSVEMMVMDSLDPALLQMKTEVMEAAVGGAVGVAGAAHEAT
VTTVDDTQIITLQVVNMEEQQLGLGELQLVQVPVSAVPVTAATVEELQGTLVDATAMPKD
GEPVICHTLPLPEGFQVVKVGANGEVETVEQDELQAQEEQPQQQVEDEMGEAQNEDPNWA
KDPDYAPPVKKTKKTKKSKLRYNTEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKP
PKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRN
HLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIR
SHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHT
ENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGRKCRYCDAVFHERYALIQHQKSHKN
EKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSQCDKTFRQKQLLDMHFRRYHDPTFV
PTSFVCNKCGKTFTRKNTMARHAENCSGVDSAEGENGTPPKKGRGGRKRKMRSRKDDDDD
DDDSDEHGEPDLEDIDEEEEEEIIEDDQMDMEQAPPSIPIPAPVEPPVKRKRGRPPKNAA
KVSPVKSGPNTTPATAAIIQVEDESTGAIENIIVKKEPEASDTAVVAVQPVVEEVDAIEA
EVETVQIAIPEAAPNGDLTPEMILSMMDR
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgaagtataccttttcggttcaggtaatacccatggaggggggaccgaccgaggcagtg
gttgaagaggcaggggatgcttttaaggccaaggaatgtaagacataccaaaggcggcgt
gaggatgaagaggtgggagctgaactgctgcaggctgctggtttagaacaagtccatact
gaaggagaagctgtagtgacccagcagcaactggttgaaggagtagttaatgtcaacagc
agtgtggaaatgatggtgatggactccctggaccctgccttgcttcagatgaagacagaa
gttatggaggctgctgtcggaggagctgttggtgttgccggcgctgcgcatgaagctact
gtcaccactgttgatgacactcagatcatcaccctacaggtggtaaacatggaagagcaa
cagttggggttgggagagctgcagctggtgcaggtgcctgtttcggctgtgcccgtcact
gcagccactgtagaagagctgcagggaacactggtggatgccactgccatgcctaaagat
ggagagccggtcatttgtcacactctgccgctgcctgagggttttcaggtggttaaggta
ggtgcaaatggagaagtggagaccgtggagcaggatgagctccaggcccaagaggagcag
cctcaacagcaagtagaggatgagatgggtgaagcccaaaatgaagaccccaactgggcc
aaagatccagactacgcaccacctgttaaaaagactaagaagacaaagaaaagcaagctg
cgctacaacacagagggagataaagacatggatgtgtctgtgtatgactttgaagaagaa
cagcaggaaggattgctctctgaggtcaatgctgagaaagttgtgggcaacatgaaacca
cccaaaccaaccaaaatcaaaaagaagggtgttaagaagacattccagtgtgagctgtgt
agttacacctgcccacggcgctcaaacttggaccgccacatgaagagccacacagatgag
aggcctcacaagtgccatctttgtggtcgagccttcaggaccgtcaccttgttaagaaac
caccttaacacccacacaggcaccagaccacataagtgcactgactgtgacatggccttt
gtcaccagtggagagctggtgcggcacagacgctacaagcacactcatgagaaaccattc
aagtgctccatgtgtgactatgccagtgtggaggttagtaagctgaagcgtcacattcgc
tctcacactggagagcgtccgttccagtgcagcttgtgcagctatgccagcagagatacc
tacaagctgaagagacatatgaggacacactcaggagagaagccctatgagtgctacatc
tgtcatgcacgtttcacccagagtggcaccatgaagatgcacatcctgcagaagcacaca
gaaaatgtggcaaagtttcactgcccccactgtgacacagttattgcccgcaagagtgat
ctcggtgtacatctccgtaagcagcattcctacattgagcagggcaggaagtgccgttat
tgtgatgctgtgtttcatgagcgttatgctctcattcagcatcagaagtcccacaaaaat
gagaagcgattcaaatgtgaccagtgtgactatgcatgccgtcaggagcgccacatggtc
atgcataagcgcacccatactggggagaagccatatgcgtgtagccaatgtgataagacc
ttcaggcagaaacagctcctggacatgcactttaggcgttaccatgaccctacatttgta
cccacatcgtttgtatgcaacaagtgtggcaagaccttcactcggaagaacaccatggcc
aggcatgctgaaaactgctctggcgtggattctgctgaaggagaaaatggtactccacca
aagaaaggccgtggaggcagaaagaggaagatgcgctctagaaaggatgatgatgatgac
gacgatgactctgatgagcatggagagcctgacttggaagacattgatgaagaggaagag
gaggagattattgaggatgatcagatggatatggaacaggctccacccagtattcctatc
cctgctccagttgaaccacccgttaagaggaaacggggcagaccccccaagaatgcagcc
aaggtttctcctgtcaagtctggtccaaataccaccccagctactgctgccatcatccaa
gtggaggatgaaagcacgggggccattgagaacatcatcgtgaagaaggagcctgaagcc
tctgatacagctgttgttgctgtccagccggtggtagaagaggtggatgcgatcgaggct
gaagtagaaacagtgcagatagccatccctgaagctgcacctaatggcgaccttactccc
gaaatgatccttagcatgatggaccggtga
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