Paramisgurnus dabryanus (large-scale loach): 135773599
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Entry
135773599 CDS
T10799
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135773599 (dennd4a)
Membrane trafficking [BR:
pdab04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
135773599 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
Motif
Other DBs
NCBI-GeneID:
135773599
NCBI-ProteinID:
XP_065139338
LinkDB
All DBs
Position
9:25061219..25096180
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AA seq
1702 aa
AA seq
DB search
MEEKGPRVADYFVVAGLTDSSKPLDEDVHPEDGSHRNGAQLKAPITDVAVVIRSLGEEVP
RGYTCLEFTPSGLSAELNAGSLMGPQIFLCYRRGRDKPPLTDLGVLYEWKEKLKPDCNII
QTTPSGRPANISSSSSQRIYITYRRASEIHSHATLAVTDICVIVPGKGETAPHAFCKVEK
NLNSSMWGSSVYLCYKKSLAKTNTLAFKAGLLSRYPEEDYDSFPLPESVPLFCLPMGASI
ECWPSQTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEEHLTDKQRSQLGLLGNGIRS
DGSVTVHTNKSICLLSHWPFFEAFRSFLTFLYRYSISGPHTLPIEKHISHFMHKVPFPSS
QRPRILVQLSPHDSLMLSQPISSPLPLSGGRLSTLLLNLGPKNAVTLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYEPP
TDISCVDLDTNTITYKEERRALTWKMLPRKACKHLINTLSNLYHQLDEGYQMRREEGQME
TFMTEREPGSGGKTLETLEMEIQEAFLRFMAAILKGYRSYLLPITQAPSEKATDASSLFD
LQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTEKGGK
VDSEKPEDTRLIELDKSHRSEHTVYITPPELPALPEGEEPSMVYSYSGFPVLNVRLFELQ
DGPRIPTAPSVLRHISPISPAAIFRRSQQEIKSAQRMAKTYSSIPQMWSKCLLRHCHGLW
FICLPSYVSACHSKARALHTAYDVLRNMQDKKLQPPDEVCYRVLMQLCGQYGQPVLAVRV
LFEMKKAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVVRGVVLFKQVWRRRI
AHPRDTHSSDASDLDNVSHGSLDSSNDSAERVSIDADFTKMDSSDDRSSTGGQSDQGYDS
LSKEEVRLGGGEEQNSSPDMKGQDMDSLLSQSVLLKKENSSPVLEFHPSKTNGKSGTLFS
EALPKTKRPNSLDIFGGRPVRPSTLDLSPQKTVGEKEAVGGVLSPPKLAVERTVSCTVAM
ERENVAMERSMSCSSALGRPVKRMGIEAGFDPLSLMAAETKSHSDNADTPTTRRHLAEEI
HHYMNNLSSPISQRSLSVDLKGHQTPSPHSSPRMTATAGSPGASQLQPQPRTRLFSSPSL
PQGRARRVRGQRPNSLASPSSPTHSTSSFSMDSLLTPTLDVFKSSFMSAGKGVAEKASRL
YSRLSSQSSIAQDLNSDRVSVSSIGSGDPDFSSLIENDCCVDPDRLSSPQRDGAQPITRP
KKSPHRSKNCQESPSTPPRLFRQPSLTGSSLTFIKALQSPDVCADVNLAQCAQNYAIEVR
MSSCSRCNTCECLVYDEEIMAGWTADDSNLNSTCPFCGSPFLPLLNVDIRNMGDQDRTST
QDSHSGQKDAVEEPSVQVDDGASKLYNNDPDPVTVPYLSPLVLWKELESLLQNEGDQAIS
SAAIVDHHPIVFWNLVWFFRRLDLPSSLPGLYLSSKHYNRDAQPQNCASEDSKNVLVQIL
WDNPRLHQDPIKPCYLLWKSYCANPSVSAALWEEEQAVSLELLQSIVKSIQRNNVYQPMS
QILQLLGTRLGFVRQRSLYRDILFLSLVALGKSSINIDAFDREYKMAYDRLTPSQVKMTH
NCDRPPSAGVMECRRTFGLPNL
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaaggtccacgcgtagcagactactttgtggtggcaggactcaccgactct
tctaagcccctggatgaagatgtccaccccgaggatggcagtcacaggaacggagctcag
cttaaagctcccatcacggatgtggcggtggtgattcgttctcttggagaggaggtacct
cgaggatatacctgccttgaattcacaccctctggcctttcagcggagctgaacgcaggg
agtctcatggggccacagatctttctctgttacagaagaggcagagacaaaccgccactt
acagatctaggtgtcctctacgagtggaaggagaaattgaagccagattgtaacattata
cagactacgccttctggtcgccctgctaatatcagtagctcctcctcccaaaggatctac
atcacatatcggcgtgcttcagagatccactctcatgccacgctggctgtcacagacatc
tgtgtcatcgtccccggcaagggagagacggcaccacatgctttctgcaaagtggaaaag
aatctcaacagtagcatgtgggggtcttctgtatacttgtgctacaaaaaatctttggcc
aaaaccaacacgctggcattcaaagcaggactgctgtccagatacccagaggaggactac
gattcttttcctttgcccgaatctgtgcccctgttttgtctgccaatgggggcgtccatc
gagtgctggccctctcaaaccaaatattccctccctgtcttttcaacattcgttctgacc
ggcgcctctggagaaaaggtttatggtgctgccattcagttctatgagccctatccggag
gaacatttgactgacaagcagcggtctcagctgggccttctgggtaacgggatcaggtca
gatggatctgtaaccgtccacaccaacaaaagcatctgccttctatctcactggccattt
ttcgaggcgtttcgtagctttcttaccttcctatacagatactccatatcgggtccacat
actctgcctattgagaagcatatttcccatttcatgcataaggtccctttcccatcatct
caaaggccacgtatcctggtgcagctgtccccacatgatagcctgatgttgagccagccc
atttcgtctcctctccctctgagtggtggaaggctctctacactgctgttgaacctcgga
cctaagaatgcagtaacacttttggtgttggctgtcactgaacacaagattttggtgcac
tctctacgtccagctgttctgaccagtgttacagaggccctggtgtcgatgatctttcca
tttcactggccgtgcccatacattcctctctgcccgctggccctggcagatgtgctcagt
gctccatgtccattcattgtaggggtggactcacgctactttgatctctacgagccacca
actgacataagctgtgtggacctggacacaaacactataacctacaaagaagagcgtaga
gccctgacctggaagatgctgccaagaaaagcctgtaaacatctgatcaacaccctcagt
aatctttaccaccaactggatgaaggttatcagatgaggcgcgaggaaggccagatggag
acctttatgactgagcgggaacctggcagcggtgggaagactttggaaaccttggaaatg
gaaattcaggaggctttcttgcgctttatggcggccatcttaaagggttaccgctcgtac
ctgctgcccatcacgcaggctccgtctgaaaaagcaactgatgctagttcactgtttgat
ctgcaaggctttttgaagagtcgtgaccgatcccatcaaaagttttactccctcatgaca
aagactcagatgttcatccgtttcatcgaagagtgctcttttgtcagcgataaggacgcg
agtcttgctttctttgacgactgtgtcgacaagctattcggcacagagaagggaggaaag
gttgacagcgagaagcctgaggatacaaggcttattgaacttgacaaatctcatcgaagt
gagcacacggtgtacatcaccccgccggagctgccagcactgcctgaaggagaggagcca
tctatggtctatagctacagtgggtttccagtattgaacgtccgactctttgagcttcag
gatggtcccagaatccccacagcaccttcagttttgagacacattagtcccatcagccca
gctgccatttttagacgctcccaacaggagatcaaatcagcacagaggatggcaaagacc
tactcctccatccctcagatgtggtccaagtgtcttctccggcactgccacggcctgtgg
ttcatctgccttccctcatacgtcagcgcctgccactccaaagcgcgggcactgcatact
gcctacgacgttctgagaaacatgcaggacaaaaagttgcagccccctgatgaggtctgt
taccgggttctgatgcagctatgtggacagtacggacagcctgtgcttgccgttcgggtt
ctgtttgagatgaagaaagctggcgtccagcccaatgccattacatatggatattataac
agggccgtactggagagcacatggccttcctctaccagagggggttacttcctgtgggga
aagttgagaaatgtggttcggggtgtggtgctgtttaaacaagtgtggaggagacggatc
gcccacccaagagacacccattcttctgatgccagtgatctcgataacgtcagccatggc
agcctggacagctccaacgattctgcagaacgagtctcaatcgatgccgacttcactaag
atggattccagcgatgacagatccagcacaggcggacagtctgatcagggttatgactct
ttgtctaaagaggaggtgaggttaggaggcggtgaggagcagaactcttctccagacatg
aaggggcaggacatggacagcctattgtctcagtcggtgctcctaaaaaaagaaaactca
tcccccgtgcttgaattccacccatccaaaaccaacgggaaatccggcactctcttttct
gaagcccttccaaaaactaaaaggccaaactccctggatatttttggagggaggcctgtt
aggcccagcacactagacttaagcccacaaaagacagtaggtgaaaaagaagcagtgggg
ggcgtcctgagcccacctaaactcgctgtggagaggactgttagctgcacggttgccatg
gagagggagaatgttgccatggagaggagcatgagctgcagcagtgctcttgggcgacca
gttaagcgaatgggtattgaagcagggtttgatcctctctccctcatggccgctgagaca
aaatcccacagtgataatgcagatacccccaccacccgtcggcacctggccgaagagatt
catcactacatgaacaacctaagtagtccgataagccagcgttctctcagcgtggacctg
aagggccaccagaccccgtctcctcatagctctccacgcatgaccgcaactgccggctcc
cccggcgcttctcagctccaacctcagccacgaaccagactcttctcctcaccttccctc
cctcagggccgggcccgtagggtcagagggcagcgacccaattccctggcttctccctct
tcaccgactcattctacttcgtccttctctatggactctctgctcaccccaacactggac
gtgttcaagagcagcttcatgtctgcagggaagggcgtcgctgagaaagccagtcgcctg
tattcgcgactttcctcccaaagctccatcgcacaggatttgaactctgatcgggtcagc
gtgtcttcaatcgggtcaggtgaccctgatttttcctcactaattgagaacgattgctgc
gtggaccccgacaggctctcctctcctcagcgggatggagctcaacccatcacacgtccc
aaaaagagccctcacaggagcaaaaactgccaggaaagcccatccacaccgcctcgactg
tttcgccagccatcccttactggatcgtctttgacatttattaaagcactgcagagccca
gacgtgtgtgctgatgtgaacctcgctcagtgtgcgcagaactacgctattgaagtacgt
atgtccagttgttcacgatgtaacacctgtgagtgtttggtgtacgatgaagagattatg
gccggttggacagctgacgactccaatctcaatagcacgtgtccgttttgcggctccccg
ttcttgccgctgcttaacgttgacatcagaaacatgggtgaccaagacagaacctccacc
caagactcacatagtggccagaaagatgcagtagaggaaccatcagttcaagttgatgat
ggcgctagtaaactatacaacaatgaccctgatccggtaactgtgccctatttgagtcct
ctggtgctttggaaagaactggagagcttgttgcagaacgagggcgatcaggccatctca
tcggcagccatcgtggatcaccaccccatcgtattctggaaccttgtgtggtttttccgt
aggctggacctacccagcagcctgccaggattgtatctgagctccaaacactacaacaga
gatgctcagcctcaaaactgtgcatcagaagacagtaagaacgtcttagtccaaatcctg
tgggacaaccctagactgcatcaggaccctatcaagccctgctacttgctctggaaatca
tattgtgcaaatccttcagtatctgctgctctgtgggaagaggagcaggcggtgagctta
gagctgctgcagagcatcgtgaagagcattcagaggaacaatgtctaccagcccatgagt
caaatactacagcttctgggcaccagactgggcttcgtcagacaacggagcttatataga
gacatcctgttcctgtctttagtggctttgggcaaaagtagcataaatattgatgcattt
gaccgcgaatataaaatggcatacgaccgtctgactccaagccaggtcaagatgacccac
aattgtgaccgaccaccgagcgctggagtcatggagtgcaggagaacctttggactgcct
aacctgtga
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integrated database retrieval system
