Paramisgurnus dabryanus (large-scale loach): 135774145
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Entry
135774145 CDS
T10799
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135774145 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135774145 (exosc2)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135774145 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
135774145 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
Motif
Other DBs
NCBI-GeneID:
135774145
NCBI-ProteinID:
XP_065140118
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All DBs
Position
5:complement(37641305..37643852)
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AA seq
294 aa
AA seq
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MAAEMRLPAVHKHISLTASQLHDDKRLVVPGEVITSDTGFMRGHGTYMDEDRLTASVAGE
VERVNKLICVKPLKTRYNGEVGDVIVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGE
LRRRSAEDELAMRDYLQEGDLISAEVQSIFSDGALSLHTRSLKYGKLGQGVLVLVSPSLV
KRQKTHFHNLPCGASIILGNNGYVWLYPTPGQLDEEAGGYFTNMEPVSLSDREVISRLRN
CLLALGAHKVLLYDTSVLYCYESSLSHQIKDILKPEVMEEIILETRQRLVEHEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagatgagattaccagcagttcataaacacatttcattaacagcatcacag
ttacatgacgataaacgcctggtggtacctggtgaagtcatcacatctgacactgggttc
atgagaggtcatggcacatacatggatgaagatagactcacagcatcagttgctggagaa
gtagagcgggttaataaactcatctgtgtgaagccactcaagaccagatacaacggtgaa
gttggtgatgtgattgttggcagaattacagaggtgcagcaaaaacgatggaaagtggaa
acaaactctcgactggattctgtattactgctgtcttcagtcaatctacctggaggagaa
ctgagacgtcgatcagctgaggatgaattggccatgagagattatcttcaggagggagat
ctcatcagtgcagaggttcagtccatattttctgatggtgctctttctttgcacactcgc
agtttgaagtatgggaagctgggtcaaggtgtgcttgtgctggtatcaccatctctagtg
aagagacagaaaactcatttccacaatctaccgtgcggcgcctccatcatactgggaaac
aatggctatgtgtggctgtatcctacaccaggtcagctggacgaggaggctggaggatat
ttcaccaacatggagcccgtgtccctgtcggatcgggaggtgatttctaggttaaggaat
tgtttgttggctctgggagctcataaggttttgctttacgacacaagtgtgctttactgc
tatgagtcttctctttcacatcagattaaagatatcctgaaaccagaagtgatggaggag
atcattctggagacacgacagcgtctagttgagcatgaaggctga
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