Paramisgurnus dabryanus (large-scale loach): 135774167
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Entry
135774167 CDS
T10799
Symbol
vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04140
Autophagy - animal
pdab04148
Efferocytosis
pdab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135774167 (vps33a)
04148 Efferocytosis
135774167 (vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135774167 (vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135774167 (vps33a)
Membrane trafficking [BR:
pdab04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135774167 (vps33a)
Hops complex
135774167 (vps33a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
DUF7816
Motif
Other DBs
NCBI-GeneID:
135774167
NCBI-ProteinID:
XP_065140149
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All DBs
Position
5:39272609..39278960
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AA seq
600 aa
AA seq
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MASHLSYGRVNLNILREAARKELREFLDKCSGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGHIPSAAVKNIVFFVRPRLELMDIIAENVASEDKLHPPRDFHILFVPRRSLL
CEQRLKEKGVLNSFTNIDEYILDLIPYDGDLLSMESENSFRECYIENDQTSLYHTAKGLM
TLQALYGTIPQIFGKGECARHVANMMLRMKRECAGSPTQILPVFDTLLLLDRNVDLLTPL
ATQLTYEGLIDEIYGITNGYVKLPPEKFAQKKQGESSKDLPTEPKKLQLNSAEELYAEIR
DKNFNAVGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAEL
IKDITTSEVFFDSLTVEQEFMTGVDTDKVSTYIEDCIAQKDPIIKILRLVCMQSVCNSGL
KQKLLDYYKKEILQTYGYEHILTLNNLEKVGLLKLQSTMRNNYPTIRKTLKLWMEDTNEQ
NPNDISYVYSGYAPLSVRLTQLLARPGWRSIEEVLKMLPGPHFEERQQLPTGLHKKRQPG
ENRTTLVFFLGGVTYAEIAALRFLSQMEDSGNEYIIATTKLINGTSWIKSLMDHPDEELF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacatttatcttatggcagagtaaacttaaatattttgagggaggctgcacga
aaggagctgcgtgagtttttagataaatgctccggaagtaaggcaattgtttgggacgag
tatcttactggacccttcggcttgattgctcagtattctcttttaaaggaacatgaagtg
gagaaaatgtttacgctcaaaggcggtcatataccatcagctgcggtcaagaatattgtg
ttttttgttcgaccaaggttggaactgatggacatcattgcagaaaatgttgcaagtgag
gataaattacatccaccaagagatttccacatcttgtttgtgcctcgccggagtcttctg
tgtgaacagagactgaaagagaagggggtacttaactcatttacaaacatcgatgagtac
atccttgacctcatcccgtatgacggagatcttctttccatggagtccgagaattccttt
agagagtgttatatagagaatgatcagacgagcctgtatcacactgcaaagggtctcatg
actttgcaagcgctttatggaacgataccccagatttttggcaaaggagaatgtgcaagg
cacgtggccaacatgatgttgcggatgaagagagagtgtgctggaagtcccacacagatc
ctacccgtgtttgatacacttctgctattggatcgtaacgtggacctgctgacgcctctg
gccacacagctgacttacgaaggtctcatcgatgagatctatggcatcaccaatggttat
gtgaagctgccacctgagaagtttgcgcagaagaaacaaggagaaagtagcaaagatttg
cccaccgaacccaaaaaactgcagctcaattcggccgaggagctctacgctgaaatacgg
gacaagaacttcaatgctgtcggtgcagctctcagcaagaaagccaagattatatcagcg
gcgtttgaggagcgacacaatgcaaaaactgtcggagagatcaaacagtttgtttcccag
ttacctcacatgcaggccgcccgcagctcactggccaatcacacgtctatcgctgaactc
attaaagatattacaacctcagaagttttctttgacagtcttacagttgaacaggagttc
atgactggtgtggacacagacaaggtcagcacatatatagaagactgcattgcacaaaaa
gacccaattataaaaatccttcgactggtttgcatgcagtctgtctgcaacagtggactc
aaacagaaactcctggactactataagaaagaaatcctacagacatacggatacgagcac
attctgactctcaacaacctggaaaaggtcgggttactcaaacttcagagcaccatgaga
aataactatcctaccatcagaaagacactgaaactttggatggaggataccaatgaacag
aacccgaatgacatctcgtatgtgtacagcggttacgctcctcttagtgttcgtctcact
cagctgcttgctcgaccgggctggaggagcatagaggaggtgctgaagatgttacctggt
cctcattttgaggaaagacagcaacttcccacaggccttcacaagaaacgtcaaccgggt
gaaaacagaacgactctcgtcttcttcctgggcggtgtgacgtacgccgaaatcgcagct
ctgaggttcttgtctcagatggaggacagtgggaatgaatacattatagccaccactaaa
ctcattaatggtaccagttggatcaaatctctgatggatcatcccgatgaagagctattt
taa
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