Paramisgurnus dabryanus (large-scale loach): 135774179
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Entry
135774179 CDS
T10799
Symbol
tia1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135774179 (tia1)
03041 Spliceosome [BR:
pdab03041
]
135774179 (tia1)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135774179 (tia1)
Spliceosome [BR:
pdab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135774179 (tia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_Nup35
Calcipressin
Motif
Other DBs
NCBI-GeneID:
135774179
NCBI-ProteinID:
XP_065140172
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Position
5:complement(39747821..39760782)
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AA seq
387 aa
AA seq
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MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHA
AASLAAMNGRKIMGKEVKVNWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGNQWLGGRQIRTNWATRKPPAPK
ATYETPNTKHLSFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDK
GYSFVRFGTHENAAHAIVSVNGTSVEGHMVKCYWGKETTEMVTPMQQVQVPQQNKVGFAA
QPYGQWGQWYGNAQQISQYVPNGWQVPTYGVYGQAWNQQGFNHLQAGAGWTGVSAVSNGG
VVEQAQGVNGAVLANQSSMGTAGYHTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgagcagcccaagaccctgtatgttggaaacttgtcacgtgatgtgaca
gaagcccttattatgcagctctttggtcagattggcccctgcaagagctgtaaaatgatt
gtggatacggcaggtaacgatccatactgcttcgtggagttctttgagcataggcacgca
gcggcctccctcgcagccatgaatgggcgtaaaataatgggtaaggaggtaaaggtcaac
tgggctacctcaccaagcagccagaagaaagacacaagcaatcacttccatgtctttgtc
ggagacctcagcccagaaatcaccactgatgacatcagagctgcctttgcaccctttggg
aggatatcggacgctcgtgttgtgaaagacatggcaacaggaaagtctaaaggctatgga
tttgtttcattcttcaacaaatgggatgcagaaaatgctattcaacagatgggaaaccag
tggttgggcggcagacagatcaggacaaactgggccacaagaaaacctccagcaccaaaa
gccacctatgaaacaccaaacacaaagcacttgtcgtttgatgaggtcgtgaaccaatcc
agtcccagcaactgcactgtctactgtggtggggtcagtacaggcctcacagaacaactc
atgagacagaccttctctccctttggccaaatcatggaagttcgagttttcccagacaaa
ggctactcatttgtaaggttcggcactcatgaaaatgcggctcatgcgatcgtatccgtt
aacggcacatccgtagagggtcacatggtgaaatgttactggggtaaagagaccacggaa
atggtgacccccatgcaacaggttcaggtaccccagcagaacaaagttggcttcgctgca
cagccgtatggtcagtggggacagtggtacggcaatgctcaacaaattagccagtatgtc
cctaacggctggcaggtacctacttacggcgtgtacggacaagcctggaaccaacagggc
ttcaatcatttacaggctggtgcggggtggaccggtgttagcgcagtgagtaacggaggt
gttgtggagcaggcacagggagtcaatggagctgtgctagccaatcagtccagcatgggc
accgcaggataccacacacactga
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