Paramisgurnus dabryanus (large-scale loach): 135774432
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Entry
135774432 CDS
T10799
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1 isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135774432 (kcmf1)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135774432 (kcmf1)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135774432 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
DUF6244
zf-C2H2
TFIIA
Di19_C
Zn_SUZ12
zf-C2H2_jaz
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
135774432
NCBI-ProteinID:
XP_065140601
LinkDB
All DBs
Position
5:47821492..47845902
Genome browser
AA seq
458 aa
AA seq
DB search
MTDGEGEADRSVSPGSIFSRENRKERPRPHFYFVFSGTFPTHRRQGARGGGCGIVCRMSR
HEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVDFDL
YYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNH
VTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRTNMHFTSSSTGGLSS
SQSSSYSASNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSTSQLQQLQMQLQLERQQAQ
AARQQLETARNATRQRSNPSNISASIPPPSSATNTAMTESNPLASHSSQFLLTRLTEPKM
SEAERQALESERADRTLFVQELLLSTLMREESSSSDEDERRDFADFGAMGCVDIMPLDVA
LESLNLKESSTGERRYLWQTSASCLAKGSPYKYSTFKN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggggagggggaagcggatagaagtgtaagccccggatccatcttcagcaga
gaaaataggaaagaaagaccgcgtccccacttttatttcgtttttagcggcacctttccg
actcacaggcgtcagggagcccgaggagggggctgtggcattgtctgtaggatgtcccga
catgaaggtgtgagctgtgatgcgtgtttaaaagggaacttcagagggcgccgatacaag
tgtttaatttgctacgactacgacctttgcgcatcttgctacgaaagtggagccacaaca
actagacacaccacggagcacccaatgcagtgcatactaaccagggtagactttgatttg
tattatgggggggaggctttctcagtagagcagcctcagtcgtttacttgtccttactgt
ggtaaaatgggctacacggaaacatctctacaggagcacgtcacctcagaacatgcagag
acctctacagaagtgatttgcccaatctgtgccgcattgcctggtggtgaccccaatcat
gtgacagatgactttgctgctcatctcacacttgaacacagagcacctagagatttagat
gagagcagcggcgtgcggcatgtgcgtcgaatgttccaccctgggcggggattgggtggt
ccgcgggcacgcaggactaacatgcactttaccagtagctctaccggtgggctctcctct
tcacaaagctcctcctactctgcaagcaatagggaagcaatggaccccatagcagaactg
ctctctcagctgtcgggtgtgcggcgctcggcaggagggcagctgaactcctctggcccc
tcgacttcacagctgcagcagttgcagatgcaacttcagctggagcggcagcaggcgcag
gcagcgcgtcaacagcttgagacggctcgcaacgccacgcgtcagcgcagcaacccaagc
aacatcagcgccagcatcccgccgcccagctccgccacaaacacagccatgactgaaagc
aacccgctggcctcccacagctcccagttcctgctcacacggttgaccgagccgaaaatg
tcagaggcagaacggcaggcgctggagagcgagcgcgcagaccgcaccctgttcgtgcag
gagctcctgctgtccacgctaatgcgagaggagagctcctcttccgacgaggacgaaagg
cgagactttgctgacttcggcgccatgggctgcgtggacatcatgcctttagacgtggct
ctggagagcctcaacttgaaggagagctccacaggtgagcgtaggtatctgtggcagacc
tcagcttcctgtcttgcaaaaggctctccttataaatactccacattcaaaaactga
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