Paramisgurnus dabryanus (large-scale loach): 135774487
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Entry
135774487 CDS
T10799
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135774487 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdab03021
]
135774487 (taf6)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135774487 (taf6)
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135774487 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
135774487 (taf6)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
135774487 (taf6)
STAGA complex
135774487 (taf6)
TFTC complex
135774487 (taf6)
SAGA complex
135774487 (taf6)
SLIK complex
135774487 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
Bromo_TP
CENP-S
Motif
Other DBs
NCBI-GeneID:
135774487
NCBI-ProteinID:
XP_065140697
LinkDB
All DBs
Position
5:complement(49808211..49915444)
Genome browser
AA seq
636 aa
AA seq
DB search
MAEERRQKLCSVILPTESMKTMAESVGVGSLQEDSCLALSEEVSYRIKEITQDALKFMHH
GKRCKLTTSDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIDGVQPAIPENPPPAPKEQQKAESTEPLKAVKPGQEKEGAIQA
KGQGAASAEVKGKEKLRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDP
GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVT
CIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSLLDEKTQW
TTRYGCIAGLAELGHDVIKTLIIPRLSVEGVRIKAVIDGPVVSNIDRIGADHVQSLLLKH
CASVVAKTRPVPDIVEQYKADYGYLGPMLCSHVVKARAQAAYQAQTVNRTTLTITQPRPT
LSMTQSGLAASSGSRTPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSAGASSTQQ
VISLSSSQSGSPITSTVPSTPTSLQPLVKLESGNTGAVGGSRALQKYIVVSLPSSSSSLE
NKGSGVLPTSTSPISVESTVKLECSESTAANIQLKH
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagcgcaggcagaaactgtgttcggtgatcttacccactgaatccatgaag
accatggcagagtcagtgggtgtgggctccctgcaagaggacagctgtctggctctcagt
gaggaggtcagctacaggattaaagagattacacaggatgcactgaagtttatgcaccac
gggaaaaggtgcaagcttactactagtgacattgaccatgcgcttaaactaaaaaacgta
gagccgctgtatggcttccaatctcaagagtttatcccgtttcgctttgcaagtggaggg
ggcagagaattacacttctatgaagagaaggaggtagatctcagtgacatcatcaacaca
cccctcccacgagtcccacttgatgtgtcactcaaagctcactggttaagtattgatggt
gtccagccagcaataccagaaaacccacccccagctcctaaggagcagcagaaggcagag
tccacagagcctcttaaagctgtcaaacctggacaggaaaaggaaggtgccatccaggcc
aagggtcaaggtgcagcctcagcagaagtaaaaggaaaggagaagctccggatgaaacca
cgcagcacgcatgagctctctgtggagcagcagttgtactataaagagatcactgaagcc
tgtgtgggctcctgtgaagccaaaagagcggaggcgctgcagagcatagccacagaccca
ggactgtatcagatgcttccaaggttcagtaccttcatttctgaaggcgtgcgtgtaaat
gtcgttcagaataatctggctctgctgatatatttgatgaggatggtaaaagcattaatg
gataatccaactctatatttggagaaatatctccatgagttgatccctgcagtggtgaca
tgtatagtcagtaaacagctgtgtttgaggcctgatgtagacaatcactgggctctcaga
gactttgctgcaaggctgatggctcagagctgcaaaacgttcagcacaaccaccaacaac
atccagtcacggatcacaaagactttcaccaagtcgttgttagatgaaaagactcagtgg
acaacacgttacggttgcattgccggacttgctgaacttggtcatgacgtgataaaaaca
ttgatcattccacggctgtcagtggagggtgttcgcattaaagctgtgattgatgggcca
gtggtgtcaaacattgataggatcggggcggatcatgtccagagtctgttactgaaacac
tgtgcaagtgtggttgctaaaactaggccggtcccagatattgtggaacaatacaaggca
gattacggatatctgggccccatgctttgttcacacgtcgtgaaggctcgtgcacaggct
gcctaccaggcccaaacagtcaacagaacaacacttaccatcacacagccacggccgact
ctgtcaatgactcaaagtgggctggcggcatcaagtggctcccgtacacccagcatcatt
aaagtgcctagttctctcacactcatgtccactcgtcctggaacgcccacccagccgtca
cccccagcaaccaaatatattgtaatggcaaccagtgccggggcttcctcaacacaacag
gtgatcagtctcagttcctcccagtctggatctcccatcacaagtacagttcccagcact
cccacatctttacagccactcgtcaaactggagtctggaaacacaggagcagtgggtggc
tcacgggctctacagaaatacattgtggtgtctttgccttcatcgtcctcctcactggag
aacaaaggttcaggtgttctccctacttctacctcacccatcagcgttgagtcaaccgtg
aagctagagtgctcagaatcaactgcagcaaacatacagttgaaacactaa
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