Paramisgurnus dabryanus (large-scale loach): 135774778
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Entry
135774778 CDS
T10799
Symbol
cfap54
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pdab03037
]
135774778 (cfap54)
Cilium and associated proteins [BR:
pdab03037
]
Motile cilia and associated proteins
Sperm associated proteins
135774778 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
TPR_2
fn3
Motif
Other DBs
NCBI-GeneID:
135774778
NCBI-ProteinID:
XP_073669887
LinkDB
All DBs
Position
1:35330258..35356908
Genome browser
AA seq
3013 aa
AA seq
DB search
MEPAPASFYGPLDKNNPVLSSFQSEIKEFKAYIKKLLGSPNVDNRSYSRGSIRLFETWNK
YKSRLPPSYFEEHLLKIADFLFDSKLYRLALWQGYRLYLHQFSTLSLESIKDVEDFKQTF
FSDGFDTKRAPLTFQAVQGECQCIFYLERERCELPDRSGIQKMLSILGILRILMQAVLPH
ESLSWILYNGSLRMYDICRFLMSVGLASEVLEYLLWACTCLETSVPLLTADFLPWRATLY
CAVCECYFHDQAGVQAEVFAQRALGKLSELAKLEEETGCTVSSETQQAYRNATIKLAVMV
FKHVVYEHRRKPKGLFRPKQKINLKEQQQAPWPRTPTGRILMEMFKSPAAQFLAVLEALQ
DTSVRPLQTGMPEEFEVQEVVMELISAGISLLSGFGSEQNLDASLPPSVNAVASVSTLCE
MAVAGSCKISVDGAVKFLKQLFRFEQWSAFCTLSSALMSTLQNLEGRLFRKYELELMLLK
AVESLISTQKVKFIMKDTAACDKDKNIRSANMTEEFFSLIQTLYACCCRADKDIRPDADL
VLDLILFFWAKCKTVFQRAQMRHGYSVRYLGKMENHEQWVETLHLLCEVVYEHQLAEIDC
ISVAEMTLRLAMVLESSADALPQSGRKTVSTIGSSEKSTPVEKTACTLYMRSRAEQLQTA
LDLVERGMECVSRCRARSLSGHNAVFDEVFMQKFGGTKSSMGENSTPDLAILTDLHLELL
AFQHRLSLKLHDSCPEEISLMQMKTSEANRTTQKVTVGLTIPAAKPMQIFFFTEFVMLEK
VKRNKISKSILLAQKALLNFRKDQTNKDTKKILEEAITLIEQAEMEEKRLVSSSSSPAEI
SLGGAEKKQPPPAPILLSRSNHSMTFTPAPYALEEEVCWYCIYGKEVEGVNLKVRLKDCH
LRGTGDVIPARGECLLDVSGLEPNQKYIFAVAAFNAQGRMVGGAIGETTRPLLASLTLPL
LTAWAHLAQVSYQTGFFTLAKRACKELWSHFIHPSCSDPESPKPEQEDCFEGLAQTRLGP
ATLQLSSPLLHQLFLSTIFIQTDIHIQEGALYCDNLCDGGPLIWGQEARLAECERMLVAV
DLALHINDRSSTLQAVVSCYGLLAPIIYHQIPSEPVIEVLLKCFTVLLEIPGLLKQKRPA
AVTESLQHMVACMTYYLAKSLNFTQETRMASSVIELGRKLLQEISEPSQQLPKKGVQQDI
KMEALTNDEKPSEHLKALDAIFMKSMHSGDYDVTFCNKTLSQEHDLTGQEDPVVLYTVIK
NKPLQNAFQEVMKFKQTSCFLEFLICLLQKALQEDQLDLVLQWEPNILDCLCRRDVALLA
IKKRPSQPVEESVGFTTSVIEYNTKKQVNTSYGGKNSRRKKLLSAFKSNNSKREIKALDI
LVNKLTALIRRHGNGWKLRKIRSEESLSRCHVNLSLARAHLGLLRRNLGPPPHHCFSHMP
LSFFSLAHCGTLVMWKNVPQRIRAPELPDPEAVSHPGWHISQRHVKDIETNHGESNSNEE
DSETDDEVDSKVQYTHISERNGQFSVDGPPADQTASQLLDTLNKASIHMRRAMVLAHRWG
HWTTLHWACRTLWDQSSTLILMLDPDALSGHLTLEQMYTVITPLLMLASDLLMDMMEKLK
LWDVYDTEEEELETSLHFSAQMDDGTVVDLRWLRTLVLHTLELLYYQAKWENLAHLALLF
NTYTRERYSHVVTPILVHAQRRLLDRIRCFGGPPAPQPHFTHTQMITGEKVTCRTYAGKQ
LLFPCGKGPLTKNDSHSELSDVKRAMCLVCVPLDVDDTLRCFRETMERRRYALLTFQHSR
NLLYLLLADTQHSYVKVPFSKKPSGVLQGKVEFSLAATTPPGISPLDLSDEDYRTLGSIY
STTLPPSQIQTVLSAYNNAIKYLHANKYNSLHVQALHDLGNLHFYKGNRKSAHSFWSKAL
DCALQSSGVLESWDGDSWSSSTSQETLRHAGIWACLQGAWLSAKIAQHILTSNINQRTKC
CLLSTKLFKCLLMASMPHPMMDLAYSTYSVETELIPGIDLFSEPDRGNLGTTVASLSFLC
HWLYNSGHFLKALPVVALYLYIAKTVCRDPHLTVSCRILKVKVLTELRIFSQAVEELNSL
TFGKEIPLPHGCNHRTEESSWATNRFIDRKSLLDPSNLQVLEDVINRSPSEDIKALYGSK
LTRRLLMARVHLILTICSTIHNLPEPLTTAYNXITHMLKPSEVSESSDTFSGDDSNCSKP
KGLQLNSRRVTLTLGELKAILLKEANVLVSPEIFALQPLNTDPEELELAVEIRLLRSNIN
LQQGRMVTSADLAVSAISLLQSSPVFQSDFRPIPPPRPPSSTLRRSRSKAHQISSPEPKS
IVSFQTGDVPSWVDARERMDCLFWLRCRLAVVCSLAGHIPGTSIYSDVDSSAEAFKVLKE
GLAEAEAWGDPDTTALLLLQGVQLNTHLGKAREDSTLMLQEIVSLLSGRIALSQRSQMAL
AEAALLLSELRGTGSQTLHLITQKLLQQQLCALGESVDLNKGGEVELQSEGLKNIYLLQL
PMLAKTTMRMGHSLALQALLGSSEEAGEPWRPLVSAHEVLQSALNISQASANRDLQLEGD
ILYCTGLLGRHLISMQQSDPQKVLEALLQCVHSHNHNLLLIHRCYLEIALVYLQQWEQPA
HLTPPTFPTPDEASKETDGESHLLVFWMCLRMALKTSDAIDTCYRFHGFTEDTESHLSPS
SIEALPDFAMNDLLHTWAGSLENRGTLMSNTEEFMDTGHELNSRKCSQLTWVHLSRYYTH
LLNLLQVSSRPVKGADGLLSVAGDCNLSLRLSQLHTFFSLYLPSYKKQWAVPDPPAAVIL
EPQLIQASLGQEGEPVPNLYPWAIAVTQELCIQWYRPTLQDSMILLVFAVNNAPLSAMNP
TAEAAAGLQAGQKLVCLDRLKAVHALLRSICTEADVSPITSSISSVSSQEEEQTTAATSK
PPRQQEILWEKTTLVCTEIRDLLKPDLNLTPITEVPFDPSMQILRDLERCFNPSTGSTLC
DKGFITWLLSLMS
NT seq
9042 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgcgccagcgtccttttacggacccctggataaaaacaatcccgtcttatca
tcttttcaaagtgaaataaaagagtttaaagcttatataaagaaacttttagggtcgcca
aacgtcgacaaccgatcctactctagagggtctataaggctgtttgaaacatggaacaaa
tataaatcccgccttcctccatcttattttgaggagcatctgttgaaaatagcagatttc
ctctttgacagtaagctttacagacttgctctctggcaaggttacagactctacctccat
cagttttctaccctaagtttggagagcattaaagatgtggaagatttcaagcagaccttc
ttttcggatggttttgatacaaaaagggcaccacttacttttcaagctgtgcagggagaa
tgtcaatgcatcttctatttggagagagagagatgtgaacttccagaccggagtggcatt
cagaagatgctgagcattttgggaattctgcgcattttgatgcaggctgtactgccccat
gaaagcttaagctggatattatacaatggatcattgcgcatgtacgacatatgccgattc
ctgatgtctgtgggtcttgcatcagaggttttagagtacttactatgggcttgtacatgt
ctggagacgtctgttcctttgctgactgctgactttcttccatggagggccacactttat
tgtgcagtgtgtgaatgttattttcatgatcaggctggagttcaagcggaggtgtttgcg
caaagagctcttggtaagttaagcgaattggccaagctggaggaggagactggctgcacg
gtgtcgtctgagacccaacaagcttatagaaatgccactataaaacttgcagtgatggtg
tttaagcatgtggtgtacgagcaccgcagaaaaccgaaaggactcttcagacccaaacag
aagatcaatttgaaagagcagcagcaagctccatggcctcgtacacccactgggcgtatt
ctgatggagatgtttaagagtcctgccgctcagtttctggctgtgctggaggccctacag
gacacctctgtcaggcctcttcagactggcatgcctgaagaatttgaggttcaggaggtg
gtgatggagctgatatcagctggcattagtttactgtctggctttggttccgaacagaat
ttggatgcgagtttacctccctctgtgaatgcagttgcctctgtttccactctctgtgag
atggctgtagctggaagttgtaagatctcagtagacggtgcagtaaagtttctgaagcag
cttttcagattcgaacagtggagtgcgttctgcacactctcctctgcccttatgtcaaca
ctacagaacttggagggtcgcctgttcaggaaatacgagctggaattaatgcttttgaaa
gctgtggaatctttgatctctacacaaaaagtgaaattcataatgaaagacacagctgcc
tgtgataaagacaagaatatcaggtctgcaaacatgacagaagaattcttcagtcttatt
cagactctttacgcttgctgctgcagagcagacaaggatatccgaccagatgctgatttg
gtgctggaccttatcctgttcttttgggctaaatgcaagacagtgtttcagagagcacag
atgaggcatggttactctgtgcgctacctgggaaagatggaaaaccatgaacagtgggtg
gagacccttcatctactgtgtgaagtggtatacgagcaccagctggctgaaatcgactgc
atatcagtggctgaaatgactctgagattggccatggtgctggaaagcagtgcagatgcc
ctgccgcagtcaggcaggaaaacagtttccaccataggcagcagtgaaaaatccacccct
gttgaaaaaacggcatgcacactttatatgaggtccagagcagagcagctccagacagca
ctggatttggtggagcgaggcatggagtgcgtgtccaggtgcagagccaggtcactcagt
gggcacaatgctgtctttgatgaagtgtttatgcagaaatttggtggcaccaagagttcc
atgggtgaaaacagtacacctgaccttgctatccttacggatttacatctagagctgctg
gctttccaacacaggctctccctcaagctacatgactcatgtccagaggagatcagtttg
atgcaaatgaagacctcagaagcaaacagaaccacccaaaaagttacagtaggactcacc
atacctgcagcaaaaccaatgcagatttttttcttcacagagtttgtgatgcttgaaaaa
gtcaagaggaacaagatctctaaaagcattttgttggcgcagaaggccttactgaatttt
aggaaggaccagactaacaaagacaccaagaaaatactcgaggaggcaataacactgatt
gaacaagcagagatggaggagaagaggctggttagttcttcatcatctcctgcggagatc
agtttaggaggggcagagaagaaacaacctccaccagctccaatactcctctcacgctcc
aaccactcaatgaccttcacaccagcaccatacgcacttgaggaggaggtttgctggtat
tgtatttatggtaaagaggttgagggggtcaacttgaaggtgcgacttaaagactgccac
ctgcgtgggactggagatgtgattcctgccagaggtgaatgtctgcttgacgtaagtggg
ttggagccaaatcagaagtatatatttgcagtggctgcttttaatgctcagggcaggatg
gtgggtggtgctattggagaaaccaccaggcctctgctggcctctttaactctaccattg
ctaacagcctgggcacacctagctcaggtgtcttatcaaacaggatttttcacccttgcc
aagcgagcttgtaaagaactttggagtcactttatccatccttcatgctcagatcctgaa
agccctaaacccgaacaagaagattgctttgagggactcgctcagacaaggctcggccca
gctaccctacagctttcatctccactcctgcatcagctttttctttcaaccattttcatc
cagacagacattcacatccaagagggggcactatactgtgacaacctctgtgatggaggg
cctttgatttggggccaggaggccagacttgcagagtgtgagcggatgctggtggccgta
gatcttgctctgcacatcaatgacagaagtagcacgctgcaagctgtagtgagctgttac
ggccttctcgccccaataatctaccatcagatcccttcagaacctgtcatagaggtgttg
ctcaagtgcttcactgttctcctggagatccctggtttgcttaagcaaaaacgtccagct
gctgtcacagagtccctccagcacatggttgcttgtatgacgtactatttagccaagagc
ctgaactttactcaggaaactcgcatggcttcatccgtgatagagcttggaaggaagctg
cttcaggagatctctgagccttcacagcaactccccaaaaaaggagtgcagcaggatata
aagatggaagctctcaccaatgatgagaagccaagtgaacatctaaaggctttggatgcc
atttttatgaaaagcatgcattctggcgactatgatgtcactttttgtaacaaaacatta
tctcaagagcatgatctcactggacaggaagacccagttgtgctatacacagtgatcaaa
aacaagcccctccagaatgccttccaagaggtgatgaaattcaaacagacgtcttgtttt
ctggagtttttgatatgcttgctccagaaggccctgcaagaagatcagctagatttggtt
ctgcagtgggagccaaacatcttggattgcctctgcagacgtgatgtggctctgttagct
ataaagaagcgtccaagtcaaccagtggaagaatctgtagggttcacaacgtctgtgatt
gagtacaacaccaagaagcaggttaacaccagttacggtggcaaaaattcacgacggaag
aaactactgagtgcattcaagagcaacaactctaaaagagaaatcaaagctttggacatc
ctggtaaataaactgactgctttaataagaagacacgggaatggctggaagctcaggaag
atccgctccgaagagtcactttcgcgatgtcacgtcaacctaagcctggctcgtgcccac
ctaggtctgctaaggaggaacctgggaccacctccccatcactgtttcagtcatatgccc
ctgtcctttttctctttggctcactgtggaacgctagtcatgtggaagaacgttccacag
cgtatccgtgcacctgaacttccagatcctgaagctgtgtcccatcctggatggcatatc
agtcaaaggcatgtaaaggacatcgaaactaaccatggagaatcaaacagcaatgaagag
gacagtgaaacggatgacgaagtggactcaaaggtccagtacacacacatctctgaaagg
aatgggcagttttcggtcgatggtccccctgcagatcaaacagcctctcagttactggac
acactcaacaaagcctcaatacatatgcgcagagccatggtgttggcacatcgctggggc
cattggacaactttacattgggcatgtcggactctttgggaccagtccagcacgctaatc
ctaatgttggatcctgatgcccttagtggacatctgacgttggagcagatgtacactgtg
atcactcctcttctgatgttggcctcagatcttctcatggacatgatggagaaactaaag
ctgtgggatgtttatgatacagaggaggaggagcttgaaacaagcctgcacttttctgcc
caaatggatgatgggacagtggtggatctgcgctggttgagaaccctggtgctccataca
ctagagcttctgtactaccaggccaagtgggagaatcttgctcaccttgctctgcttttt
aacacatacacaagggagcgctattcacacgtggtaacgcctattctggtgcacgcacag
agaaggctgttggacaggatcaggtgttttgggggcccaccagccccccagcctcacttc
acccatactcagatgatcactggagagaaggtgacctgcaggacctatgcaggaaaacag
ttgctgtttccctgtggcaaaggtccgctgaccaaaaatgattcccactcagagctttca
gatgtgaagagagccatgtgtctggtgtgtgtaccgctggatgtagacgacacgcttcgt
tgtttcagagagactatggagagacgacgctatgcacttttgacatttcagcacagccga
aatctactttacctactgcttgccgacacccagcactcgtatgttaaggtgccattctcc
aagaaacccagtggggttcttcaaggaaaggtggagttcagcttagcagcaaccacccca
ccgggcatcagccctttagatctgtctgacgaggactaccgcactctaggctccatctac
agcaccaccttgcctccatcacagatccagactgtcctatctgcttacaacaatgccatc
aaataccttcacgcaaataagtacaactccctgcacgttcaagcacttcatgatcttgga
aaccttcatttctacaaaggaaatcgaaagtctgcacattctttttggagtaaggccttg
gactgtgctctccagagctctggagttctggaatcttgggatggtgactcatggagcagc
agcacctctcaggaaaccctgcggcatgctgggatatgggcctgtctccagggtgcatgg
ctttctgccaagattgcacagcacatcctaacctccaacatcaaccagcgtacaaaatgc
tgcctcctgtccaccaaactcttcaagtgcctactgatggcctctatgccccatccaatg
atggacctggcatactctacatactcagtggagacagaattgatcccaggtatcgatctc
ttctctgagccagatcgggggaatctcggcactaccgttgccagtttgtcttttctctgc
cattggctgtataactcagggcactttctcaaggctcttcctgtggtggctctctacctg
tatattgccaaaactgtgtgccgggatccacacctcactgtctcatgccgaatactaaag
gtaaaggtccttacagagttgaggattttcagtcaggcggtagaagagctgaacagtctc
acatttggtaaagaaatacccttgcctcatggctgcaaccacagaacagaggaatcatct
tgggcaacaaatcgatttatcgataggaagtctctgttggatccttcaaatcttcaggtt
ctggaggatgtgattaacaggagcccaagtgaagacattaaggctctttacggctcaaaa
ctgaccagacggctcctgatggccagagttcatctgatattgactatatgtagcactata
cacaacctgcctgaaccattaacaacagcatacaattgaataacgcatatgttaaaaccc
tcagaggtatcagagagctcggacacctttagcggtgatgattcgaactgtagcaagccc
aagggtctccagcttaattccagaagggtcacactaacattaggagaacttaaggccata
ctcctaaaagaagcaaatgttctggttagtcccgagatctttgccttgcagccgctaaat
actgatccagaagaactggagctagcggtggagatcagactgttgcggtccaatatcaac
ctgcagcagggccgaatggttaccagtgcagatctggcagtgtctgctatcagtcttctt
cagagctctcctgtgtttcaaagtgatttccgcccgataccacctcccagacctccgtcc
tctaccctcagacgatccagatccaaagcacatcagatcagctctccagagccgaagtct
attgtcagtttccaaactggagacgttccatcatgggtggatgctagagaacgcatggat
tgcctcttctggctgcgctgcaggctggcggtggtctgctctcttgcaggccatatccct
gggacgtccatctactctgatgtagacagcagtgcagaggcattcaaggtgctgaaagaa
ggtctagcggaggcagaagcctggggagatccagacactacagccctgctgctcttacag
ggcgtccaattgaacacacatcttggaaaagccagagaggacagtaccttgatgttacaa
gagattgtcagtttgttgtcaggacgcatcgctttatctcagcgctcccaaatggctctg
gctgaagctgcattgctacttagtgagctgagaggaacaggaagtcagactcttcatctg
attacacaaaaactactacagcaacagctctgtgcccttggagagtctgtagatctcaat
aaaggaggcgaggtggaactgcagtctgaaggcctaaagaatatttatcttctgcagctc
cccatgctggcaaagaccaccatgcggatgggtcattcattggcactacaagctctgctg
ggttcctcagaggaagctggggagccctggagacccttggtatctgctcatgaagttctg
cagtctgcactaaacatctcacaggcttctgccaacagagaccttcagctggagggtgat
atcctctactgcacaggactgctgggtagacatctaatttctatgcaacaatcggatccc
cagaaggtcttggaggccttattacagtgcgtccacagtcataatcacaacctattgcta
atacataggtgctatctagaaatcgcattggtatacttgcaacagtgggagcaacctgca
catctgactcctcccacctttccaacaccagatgaagccagcaaggaaacagatggagaa
tcgcatctactggtcttctggatgtgtttgagaatggctttaaagacatcagacgctatt
gacacttgttaccgatttcatggattcacagaagatactgaaagccacttgtcgccttcc
tcaattgaagccctgcctgattttgcaatgaatgatctcctgcacacctgggcagggagt
ctggagaaccgtgggactcttatgagcaatactgaagagttcatggataccgggcatgag
ctgaacagcaggaaatgctctcagctgacctgggttcatttgtctcggtactacacacac
ctacttaaccttctgcaggtgtcctcaaggccagtgaagggtgctgatgggttgctgtcc
gtggctggtgattgtaatctttctctgagactctcacagttacacacctttttcagcctt
tacctgccatcttacaaaaagcagtgggctgttcccgacccacctgctgctgtaatactt
gaacctcagcttatacaggcatctcttggccaggaaggtgaacctgtgccaaatctatac
ccctgggccatcgctgttactcaagaactttgcatccagtggtacagacctaccttacag
gacagcatgattttgcttgtctttgccgtgaataatgctcctctgtcagctatgaaccct
actgcagaggctgcggctggactgcaggcaggacagaaattggtctgtttggacaggcta
aaggctgttcatgccttactgagatcaatatgcacagaggcggatgtttcacccatcaca
agctccatctcctccgtcagttcacaagaagaggagcagaccacagcagccacctccaaa
cctcccagacagcaggagatcctctgggaaaagactacacttgtctgtactgagatcagg
gacttactgaagcctgatttaaacttaacacccattacagaggtgccctttgatccaagc
atgcagattcttcgtgacctggaacgctgctttaatccctcaacagggagcacactgtgc
gacaagggcttcattacctggctgctctctcttatgagttaa
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integrated database retrieval system
