Paramisgurnus dabryanus (large-scale loach): 135774889
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Entry
135774889 CDS
T10799
Symbol
lum
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pdab00535
]
135774889 (lum)
Proteoglycans [BR:
pdab00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
135774889 (lum)
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Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_14
LRR_9
LRR_LRWD1
LRR_5
DUF952
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
135774889
NCBI-ProteinID:
XP_065140938
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All DBs
Position
1:complement(33558612..33561374)
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AA seq
343 aa
AA seq
DB search
MFALSCYLFVGLVCQSLGQYYDYEEYYPPSGPEVLSTASCAQECDCPINFPTAMYCNDRN
LKFIPIVPSGISYLYLQNNNIEEIKAGVFDNATDLRWLVLDHNHITSDKIQAGTIDKLTK
LEKLLFSHNNLTKPPSPLSKSLDELRMTDNQLTSFPSGTLSGMENLTTIHLSKNKLTTES
ITGAFKGLKSLVLLDVSENKLKKLPAGVPPSLLMLYADNNEIDSIPNGYLAKLPALQYLR
VSHNKLVDSGIPAGVFNVSSLLELDLSFNKLKTIPEINEALEHLYLQVNEIEKFELLNIC
KFSSPVNYSRLKTLRLDGNNVTHHMMPDDTSNCLRMASEIIFE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcttagctgttacctatttgttggactggtatgtcaaagtttgggccagtac
tacgactacgaggagtactatcccccttcgggacctgaggtactatccactgcaagttgt
gcccaagaatgtgactgcccaattaactttcccacagccatgtactgcaacgaccgcaac
ctgaagttcatccccatcgtgccaagtggaatcagttacctctacctgcagaacaacaat
atcgaggagatcaaagccggcgtgtttgataatgccaccgaccttcgctggcttgttctc
gatcacaaccacatcaccagcgacaaaatccaggcgggtaccatcgacaaactgaccaaa
ctcgagaagctcttgttcagtcacaacaatctgaccaaaccccccagccctctgtccaag
tctttggatgagttgaggatgacagacaaccagctcacctcatttccgtccggcactttg
tctggtatggagaacctgaccaccattcacctatccaagaacaaactgaccacagagagc
atcacgggtgccttcaaaggtctgaaatctctggtcctgttggacgtcagtgagaacaag
ctgaagaaacttccggcaggagtcccaccttcgctgttgatgctctacgctgataataat
gaaatcgacagcatccctaatggctacctggctaagctaccagccctgcagtatctgagg
gtttcccacaacaaattggtggactctggaatccccgccggcgtgtttaacgtgtcctct
ctcctcgagctggatttgtcgttcaacaagcttaagaccatcccggaaatcaacgaagcc
ctcgagcacctgtacctgcaggtcaacgagatagaaaaattcgagctactgaacatctgc
aagttcagctcccccgtcaactactccagactgaaaaccctgcgtttggatggaaacaac
gtcacgcaccacatgatgccagacgacacctccaactgcctacgcatggcctcggagatc
atttttgaatag
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