Paramisgurnus dabryanus (large-scale loach): 135775097
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Entry
135775097 CDS
T10799
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135775097 (pdzrn4)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135775097 (pdzrn4)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
135775097 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
135775097
NCBI-ProteinID:
XP_065141198
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All DBs
Position
1:30473229..30515804
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AA seq
789 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGRDFSKSGHEGAVEAMRKDPIVVQVLRRGHSSRNQ
SNLQEVCVVDVCTQTDITFEHIMALAKMRPSTPPVPDICPFLLSDSCHSIQTVDREYFDC
PEYVSATQAEVERADEFECEEVELCRMNSQEKLGLTLCYRTDEDEEDAAIFVGQVEPNSI
AARDGRIRQGDRILQINGHDVLDKEEAVALLSNENSRSIVLLVTRPEGQMDGSWLDEAHH
DFLEELKMEILEEQKKEGILQTACRMKRSKRLEEEVSTDTATCSSSILEKDSGIKCSFEE
TSEHETFSHAQTRTQKQLLDKWGAGSRSVPMDTISFESGQDERISESGVECDHFQQLLEL
KCQIRNGGECGLVYRRSSTIECSLTEQGGSGVARELHMLNEELRSIERECQSIMQAHQLR
RSKHDSPRTDKENRLRRGKLADINEHPERLQGEKLRDKDSSSAYNTAESSRSTPLGTEGS
PDHSLHQRVHLTNQKNLQSPHHIQSPYNSPILTFPSQSRAHTYTTSTTPLQIPITSPGSQ
GPSQAFSSSLEQSPSNPSESDPALPADDEHCERNRNRVAAALYHPSPYHSNTATTQLPST
RRYQSYLQLLQQHSSSSLEYSQSQLSLLSLRGRPGPSQSGRLEWKVKVRADGTRYVARRP
ARDRILRERALRIREERSGGMTTDDDAVSELKMGRYWSKEERKQQLARAREQRRRREFMQ
KSRLECLKESVGTASGEVSILELSHKKMLKKRNKKILDNWMTIQELMSHGARAPEGTKVH
NAFLSVTTV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaacctgtgtactttgcagaagagagaggaacattacaagctgctgtatgag
atcgcgcaggtgaatggccgtgacttctcaaagtccggacatgaaggggcagtggaagcc
atgcggaaagacccaatagtggtgcaggtgctgaggcggggtcactcgtcccgaaaccag
agcaacctacaggaagtctgtgtggtggacgtatgcactcaaacggacatcaccttcgag
cacatcatggctctggccaaaatgagacccagtaccccacctgtgccggacatctgtccc
ttcctgctgtctgacagctgtcattccattcagacagtggatcgtgaatatttcgattgt
ccggagtacgtatccgccactcaggcagaagtggaaagggccgacgaatttgaatgtgag
gaggttgagctctgtcgaatgaacagccaggaaaaactgggtctgaccctctgttaccgc
accgatgaggatgaagaagatgcggctatttttgttggccaggttgagccaaacagcatt
gccgcaagggatggacggatcagacagggcgacagaattttacagataaacggtcatgac
gtgctggacaaggaagaggctgttgctcttctctcaaatgaaaattccagatccatagtg
ttgcttgtcaccagacctgaaggacagatggatgggagctggcttgatgaagcccaccat
gacttcctagaggaactgaagatggagattttagaggaacagaaaaaagaaggaatcctt
caaacagcatgtcgcatgaagcggtccaaaagacttgaggaggaagtatctacagatacg
gcaacctgctcttctagcattctagagaaggacagtggtataaaatgcagttttgaggag
acctctgaacatgaaaccttctctcacgcccaaacccggactcaaaaacaacttctggac
aaatggggggcaggctcacgttcggttcctatggacaccataagctttgagtcgggtcag
gatgaaaggataagtgagagtggagtagaatgcgaccacttccaacagctcttggaactc
aagtgccagatacggaatggtggggaatgcggattggtgtacaggcgaagcagcactatt
gaatgcagcttgacggagcaaggcggaagcggcgtggcgcgggagctgcatatgttaaac
gaggagctacgcagcattgaacgcgagtgccagagcatcatgcaggcacaccagctccgc
cggagcaaacacgactcaccccgaacagataaagaaaatcgcttgcggcgtggcaagctt
gcagatattaatgagcatcctgaaagacttcaaggggagaagctgagagataaagacagc
tctagtgcctacaacacagcagaaagctcccgctcaacgccactgggaacggaaggatca
cctgaccactcgctacaccagcgcgtccacttgaccaatcagaagaacctccagagtccc
catcacatacagagtccatacaatagccccatcttgacgtttcccagccaaagtcgtgcc
catacttacaccacctcaacaacccctttacagattcccatcaccagtcctggttcacaa
ggtcccagccaggccttctccagcagcctggagcaaagccccagcaacccctcagaatct
gacccagccctcccggcagatgacgaacattgcgaaaggaaccgcaacagagtcgcagcc
gctctgtaccacccttcaccctaccacagcaacactgcaacaacccagctccccagcaca
cgacgttaccagagctacctacaactcctacaacaacattcctcttcttctctggaatac
tcccagagccagcttagtcttctcagcctccgtggacggcccggtccctcacaatccggc
cggctagaatggaaggtcaaagtccgggcagatggaacgaggtatgtggcacgcagaccc
gcacgagaccgcatcctacgggagcgagccttgcggatccgtgaggaacgtagcgggggg
atgactacagatgacgacgcagtcagcgaactgaagatgggtcgatattggagcaaagag
gaacgcaagcagcagctagcacgcgcgagagagcaacgacgcaggagggagttcatgcag
aagagcaggctggagtgtctaaaagagtctgtggggacagcgagcggggaagtgagcatc
ctggagctcagccataaaaagatgctgaagaaacgaaacaagaagatcctagacaactgg
atgaccattcaagagctaatgagccacggggcacgagcgcctgagggcaccaaagttcac
aacgccttcctctcagtcaccaccgtttaa
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