Paramisgurnus dabryanus (large-scale loach): 135775250
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Entry
135775250 CDS
T10799
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135775250 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135775250 (hnrnpa1b)
03041 Spliceosome [BR:
pdab03041
]
135775250 (hnrnpa1b)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135775250 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
135775250 (hnrnpa1b)
Spliceosome [BR:
pdab03041
]
Common components
Common spliceosomal components
hnRNP proteins
135775250 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
135775250
NCBI-ProteinID:
XP_065141389
LinkDB
All DBs
Position
21:3222565..3226329
Genome browser
AA seq
391 aa
AA seq
DB search
MSKEGPPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFV
TYSNVTEVDDAMEARPHKVDGRLVEPKRAVSREDSNKPFAHATVKKIFVGGIKDDTEEDH
LRDYFTDFGKIDAIEIMVDHKTGNKRGFAFVTFDDHDAVDRIVIQKYHTVNGHNCEVRKA
LSKQEMQNTGMNMRGRGGGSGGGGGGGNFGRYGNNGGGGGGYNNDFGGSGGGRDGYFGGR
GGRGGGGGGGGYGGGDCYNNNGFGGGYGGGGGGGPGGYGGNRGYGGGGGGGGYGNQGGGY
GGGSNYNDYNNGNGNFGGGGGGNFGGGSGGGGGNYNDFGSYNNQQSNYGPMKGNFGGGGG
GGRSSGPYGGGYGGGGGSGGGYGGGSGGRRF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggagggcccaccacgcgaaccggagcagcttcggaagctcttcattggaggg
ctcagttttgaaaccacagacgatagtttgcgggcgcattttgaacaatggggcacctta
acagattgtgtggtaatgaaggatccaaacaccaaacgttccagaggtttcgggttcgtt
acctattccaatgtaaccgaggtagatgatgctatggaggcacgccctcacaaagtcgat
ggtaggcttgtggagcccaagcgagcggtgtcccgggaggactcaaacaagccgtttgct
cacgcaacagtaaaaaagatctttgttggtggtatcaaagatgatacagaagaggaccat
cttcgcgactacttcactgactttggcaaaatcgatgccattgagatcatggttgaccac
aagactggcaacaaaagaggctttgcctttgtgacattcgacgatcatgacgcggttgat
cgcatcgtcattcaaaaatatcacactgtgaatgggcataactgtgaagtcaggaaagct
ctgtctaaacaagaaatgcaaaacaccggaatgaacatgagaggtcgtgggggtggcagc
ggcggaggtggtggtggcggcaactttggtagatatggcaataatggtggtggcggcggt
ggctacaacaatgactttggaggttctggaggtggtagagatggatactttggtggacga
ggaggtagaggaggaggaggaggcggcggtggttatggaggtggcgactgctataacaac
aatggatttggtggtggttatggtggaggtggcggcggtggtcctggtggttatggtggt
aaccgtggatatggtggtggtggcggcggaggaggttatggcaaccagggtggaggatac
ggcggcggcagcaactacaatgattacaacaacggcaatggaaactttggcggaggtggt
ggtggcaactttggcggcggctctggtggtggtggcggcaactacaatgactttggcagc
tacaacaaccagcagtccaactacggccccatgaaagggaactttggaggcggaggtggt
ggtggaaggagcagtggcccatatggtggtggctatggtggtggtggcggctcaggaggt
ggatatggaggtggatcaggaggcagacggttttaa
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