Paramisgurnus dabryanus (large-scale loach): 135775266
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Entry
135775266 CDS
T10799
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135775266 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pdab03310
]
135775266 (rarga)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135775266 (rarga)
Nuclear receptors [BR:
pdab03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
135775266 (rarga)
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
135775266
NCBI-ProteinID:
XP_065141406
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All DBs
Position
21:2862605..2923141
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AA seq
506 aa
AA seq
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MATNRERQVGHMTGFPPAVYPFSFNSMRSHPPFDLLTNSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDIKDEIVPPESYELSG
ELEELVNKVSKAHQETFPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPERVDRLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
QTESKEKKPEPEQPAPPPALANMKKEQEDEDDSWATENGSEPSPEEEDDDDDDGEEERGT
DSDGEAWASQEPNVEVSRKSHGGRAQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaccgggaacggcaggttggtcacatgactggttttccccctgctgtctac
cccttctccttcaattccatgaggagccacccccccttcgacctgctgaccaatagtagc
ctgtttggccgcttcggggcggatcttcccaaagaaatggcagcgctgtcggtggagacc
cagagcaccagttcagaggagatggtgcccagctccccctctccgccacctccacctcgt
gtctacaaaccctgcttcgtctgccaggacaagtcttccgggtaccactatggtgtcagt
tcttgcgaggggtgcaagggcttcttccgtcgcagtattcagaagaacatggtgtacacc
tgccaccgcgacaagaactgccagatcaacaaggtcacacgcaaccgttgccagtactgc
agactgcagaagtgcttcgaggttggcatgtccaaggaagctgtgcgcaatgatcgaaat
aagaaaaagaaggacattaaggacgagatcgttcctccagagagctacgagctgagcggg
gaactggaggagctggttaacaaagtgagcaaagcgcatcaagagacctttccttccctt
tgccagctgggaaaatatactacaaactccagctcagatcaccgagtccagctggatctg
ggtctatgggacaagttcagtgagctttccaccaagtgcatcattaaaattgtggagttt
gccaaacgcctaccaggcttcaccaccctcaccatcgcagatcagatcaccctccttaaa
tcggcctgcttggatattctgatgctgcgaatctgcacacgatatacaccagagcaagac
acaatgactttttcggatgggttgacccttaaccggactcagatgcataatgctggcttt
ggcccactcacagatcttgtgttcgcttttgccggtcagcttctgcccctcgagatggat
gacacggagaccggcctactcagcgccatctgtctcatctgtggagaccgaatggacctt
gaggagcctgagcgtgtagatcgtctgcaggaacccctgctcgaggctctgaagatatac
gcacggcgccgccgacccaacaaaccccacatgttcccacgcatgttgatgaagatcact
gacctgcgtggcatcagcaccaagggcgcagaaagggctataactctaaagatggagatt
ccaggcccaatgcctcctctcatccgagaaatgctggaaaacccagaggcctttgaagac
cagaccgagagcaaagagaagaagcccgagcccgaacagccggcccctccgccagctttg
gccaatatgaagaaagaacaggaggatgaagatgatagctgggccacggagaacggcagc
gagccttcaccagaggaggaagacgacgacgacgatgacggagaggaggagagaggtacg
gacagcgacggagaagcctgggccagccaggaacctaacgtggaggtgtccagaaaaagt
cacggaggaagagctcagtga
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