Paramisgurnus dabryanus (large-scale loach): 135775406
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Entry
135775406 CDS
T10799
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04120
Ubiquitin mediated proteolysis
pdab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135775406 (ube4b)
04120 Ubiquitin mediated proteolysis
135775406 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135775406 (ube4b)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135775406 (ube4b)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
U-box type E3
135775406 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
135775406
NCBI-ProteinID:
XP_065141631
LinkDB
All DBs
Position
21:11325192..11351433
Genome browser
AA seq
1350 aa
AA seq
DB search
MEQLSPEEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGAPSQSVPPAS
SHTLGLNAQNVTPATSPMGASGVAYRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRNLSDKDSLSNPDVSEEQALQLICKILRVS
WKEQDHDVIFLPSLAAEFQKNPRDVYSDFKDLIGQILMEALMMSTRTRDCNPFASLTATS
QPITAARSPNRHLTLVPPSSQSDSPMMPCAGSFGASSLSSLYGSSPNPLAPSSARMSAQT
APPAPPTPSTAASLVPPSPPVSRTPTTLPSIPPTAPVPISQRYRPYTLSPSVPTSPNPRS
VPSGMLTPPPTTGMPSSPSSRHGANQSSSVPLPLPPSSPNTVARRTVLAAQMSSSPFSLL
FFNLSDLSHDSSDEEPEEEDFSAVQFGSSVGATGGGMVGDRFTMESCKETEMLNYLIERF
DSVGMEERKAPKVCSQPVVSQLLSNIRSQCISHAALVLQGALTQPRAPLQPSLLVPYMLC
RNLPYGFIQELVRMTHQEEDVFKQIFVPILQGLAQASRECSFDCDNFKYPLMALAELCEI
KFGKTHPICSLMTSLPLWCPDPLSPGTGREIQRLSFLGSFFSLSVFAEDDTKVGDKYFSG
PAITMENTRVVSQTLQHYLESARGDLFKILHNILLNGETREAALSYMAALVNRNVKKAQM
QTDDKLVSTDGFMMNFLWVLQQLSMKIKLDTVDPLYIFHPKCRLNVSPEETRLKATMEEL
KSWLTEMHSDSSKFPEPKFPTECFFLTLHAHHLSILPCCRRYIRRLRAIRDLNRSVEELK
NSENQWKDSPLASRHREMLKRCKAQLKKLVRSKACADAGLLDENLLRRCLQFFSMVIQLI
LRMVEPAYPHVSLPLNPEIPKSFAALPEFYIEDVAEFLLFIVQYFPQVLYEPCTEDVVTF
LVVFICSQNYIKNPYLIAKLVEVLFVTNPAVQPRTQRFFEMMENHQLSINQLVPALMKFY
TDVEHTGATSEFYDKFTIRYHISTIFKSLWQNISHQGTFLEEFNSGKQFVRYINMLINDT
TFLLDESLESLRRIHEIQEEMKNKEQWDLLPRDQQQRRQSQLTQDERVSRSYLALATETV
DMFHILTKKVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQ
LTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLSEKVEEI
VARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSPTDPFNRQP
LNESMLEPVPELKERIQAWMRGKQSGRFSQ
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcagtcccgaggagattcgaagaaggcgattggcccggttagccggaggg
cagacgtctcagcccagcacccctctcagtacccctttgacctccccacagagagagacc
cctccaggacccttacccgggccctctggagccccatcacagtctgtcccaccagcttca
tctcacactctgggccttaatgcccaaaatgtcactcctgccacctctccgatgggggca
tcaggggttgcttaccgcagtcagagcagcgagggggtaagctctctctccagctcacca
tctaacagcctggagacacagtcccaatctttgtcccgctctcaaagcatggacattgac
acagcttcctgcgagaagagcatgtcccaggttgatgtggactcaggaatagagaacatg
gaggtggaagacagtgaccgcagagagaaaagaaacttgtctgacaaggactctttatct
aatcctgacgtctctgaagagcaggctttgcagctcatatgtaagatcttgcgtgtttcc
tggaaggagcaagaccatgatgtcatcttccttccttcacttgctgctgaatttcagaag
aatcctagagatgtttactctgacttcaaagacctgattggccagattttaatggaggct
cttatgatgtccacccgtacgcgtgactgtaacccctttgccagcttgaccgccacatct
cagccaattactgctgccagatccccgaatcgtcacctgactctcgtcccgccctccagc
cagagtgacagtcccatgatgccctgcgcaggttcattcggtgccagctctctgtccagt
ctttacggtagtagcccaaaccctctagctccaagctctgccagaatgagtgcccaaact
gccccaccggctcctccgaccccttctacagcagcctctctggttccccccagtcctcca
gtctctcgcactcccaccacactcccatctatacctccaactgcccctgtgcccatctcc
cagaggtacaggccctacacccttagcccctctgttcccacgagcccaaaccccagatcc
gtcccatccggtatgcttacgcccccgccaaccacaggtatgccctctagcccctcctcc
agacacggtgccaatcaaagctcctccgtgccgttaccccttccacccagctcccccaac
actgtggccagaagaactgtgctagctgctcagatgtcatctagtcctttctccctcctc
ttcttcaacttgtccgacctgtctcatgatagcagtgatgaagaaccagaggaggaggat
ttttctgcggttcagtttgggtccagcgtgggtgcaactggagggggcatggttggtgac
cgatttaccatggagtcctgtaaagagactgagatgttgaactacctcatcgagcgtttt
gacagtgttggtatggaggagaggaaagccccaaaggtgtgcagtcaaccagttgtcagt
cagctgctgagcaacatacgttcccagtgtatttcccacgctgcacttgtgcttcaaggt
gccctcacacaacccagggccccactacagccctccctgctggttccctacatgctgtgc
cggaaccttccatacggctttatccaggagctggtacgcatgactcaccaggaggaggat
gtgtttaaacagatcttcgttcctattctgcaagggcttgctcaagcttcaagagagtgt
tcatttgactgtgacaacttcaagtatcctctgatggctttagctgagctttgtgaaatc
aagtttgggaagactcaccccatatgcagtttgatgacctctctgccattatggtgtcct
gaccctctcagtcctggtacaggaagagaaattcaaagactctccttcctcggatctttc
tttagtctctctgtgttcgcagaggatgacactaaagtgggagacaagtacttttcaggc
cctgccataactatggagaacactcgtgtggtcagccagacgcttcagcactatctggag
tctgccaggggtgatctatttaaaatcctgcacaacatcttgcttaatggagaaacaaga
gaagcagctctgagctacatggcagctttggtgaaccgtaatgtaaagaaggctcagatg
cagactgatgataagctggtgtccacagacggattcatgatgaacttcctgtgggtgctt
cagcagctgagtatgaagatcaagctggacacggtggatcctctctacatctttcacccc
aagtgtcgattgaacgtcagcccagaagaaaccagactcaaagccacaatggaggagctg
aagagttggctcacggagatgcattcggactcatctaagtttccagagccgaagtttccc
actgagtgtttcttcctgacgctacacgcacatcacctgtccatcctgccctgctgtcgt
cgctacatacgcagactgagggccatacgggatctaaacagatcggttgaggagctgaag
aacagtgagaaccagtggaaagattccccattggccagtcgtcatcgggaaatgctgaag
agatgtaaagcacagctgaagaaactggtacgctctaaagcctgcgcagatgcagggctg
ctggacgagaacctgctgcgcagatgtctgcagttctttagtatggtcatacagcttatc
ctgcgcatggtggagcctgcctatccacacgttagcctgcctctgaatccagaaattccc
aaaagctttgcagcactgcctgagttttacattgaagatgtggccgagttcctgctgttt
attgtgcagtactttccccaggtcctttacgagccatgcaccgaagacgttgtgaccttc
ctggtggtctttatttgcagtcagaactacataaagaatccatacttgatcgccaagctg
gtggaggtgctctttgtcaccaacccagcagtgcagccacgcacccagaggttcttcgag
atgatggagaaccaccagctgtcaatcaatcagctcgtgcccgccctcatgaagttctac
acagatgtggagcacactggagccactagtgagttttatgacaagtttaccattcgctac
cacatcagcaccatattcaaaagcctgtggcaaaacattagccatcaagggacctttctg
gaggagttcaactctggaaagcagtttgtgcgctacatcaacatgctgattaacgacaca
actttcctgctggatgagagtctggagtctctaagacgcatccatgagatccaggaggag
atgaagaacaaagagcagtgggaccttctgcctagggatcagcagcaaaggcgtcaatcc
cagctgactcaggatgagcgggtgtcacgttcctacctggctttagccacagagacggta
gacatgttccatatcctcaccaaaaaggtccagaagcccttcctgaggcctgaactaggc
cctcgtctagctgccatgttgaactataaccttcagcagctgtgtgggcctaaatgtcga
gacttgaaggttgaaaacccagaaaagtacggttttgagccaaagaagctcctggatcag
cttactgatatctacctgcagctggactgtgcccgatttgctaaagccattgcagatgac
cagcgctcatacagcagggagctctttgaagaggtcatttccaaaatgagaaaggcgggc
ataaaatccaccattgctattgagaaattcaaactcctgtctgagaaggtagaggagatc
gtagcccgtaattctcagtctgagatggattacagtgacgccccagatgagtttaaagat
ccactgatggacactctcatgacggaccccgttcagctgccctctggcaacatcatggac
cgatccatcatcctgcgacacctcctgaactctcccacagatccttttaacagacagcct
ctaaatgagagcatgctggagccagtcccagagctgaaagagcgaatccaagcctggatg
agagggaagcagagtggacgtttttctcagtga
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integrated database retrieval system
