Paramisgurnus dabryanus (large-scale loach): 135775604
Help
Entry
135775604 CDS
T10799
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K24357
collagen type XX alpha
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
135775604
NCBI-ProteinID:
XP_065142045
LinkDB
All DBs
Position
Unknown
AA seq
1557 aa
AA seq
DB search
MPGHSSLLSFILVTVLMMLVSEVHTQGRLKLTVLSEDRLQIKWKEAEGPVQGYKVRVRPI
TEVPQPELMLTTTHGRATVAGLDSRQEYLLQVLVLNGTQEKLIAKRRFTIDGLREEELIR
NGNREQKKKTHAIGSGSGEDDDITEALAALPTVLYRKPTTTASPELEPEAKDKKKKKDKN
RSKTEDKSDPEENRLKPVREEITNTDKTRKTTPTQPVTAVSTRKPFECGAGAKADVVLLV
DGSWSIGRTNFRKVRDFLEGMAVPFHISPEGVQIALSQYSGDPRTEWNLNNFTSKEPLLE
AIRNFRYKGGNTFTGQALIHALENNLKEEAGARPDTPQFLLLLTDGKSQDDAIAAANRLK
NAGVEIIAIGVKNADEAELRQVASEPLELNVYNVNDFPLLSKLVGRLARILCGKIEDRIK
AKRMERPTEDPVLSYPRPTDLQYESVGSREARLRWIPPSKSPKQYRLVYHTSEGQGLMEM
VVNGSDSTALLTGLTSQTQYHLSIFPVYENNVGSALRGTLTTLPLAMPKALEVTASSPSS
LRVRWQPAAGATQYMALYSALTDGEPDDAKEVKFGPAQTDVELVDLMPSTDYSVTLYALY
DEDPSDPVTALGTTFPLPTPLSLQFPMVSHSTLKVTWVPGAVDVPSHRIIYSTNHGSDVK
QVEVRGVNTALLQNLASLSRYLVSVQSLYEKGLSTPVTANVTTLKVPAPSDLRVTNFSGS
DITVRWEPAADDVVSYLIKWISLSGGDLRQLTVDGDSEGAILEGVEEDNEYQISLSALYA
DGAQSEAVAIRYSTLSGGGPSSLSISEETAVSMVVTWVPPNAHVLQYRVSYTPLTGDAKE
NTVSLPGSEKRILLQNLQPDTRYSILVTAEYRNREGGSATAQGRTTSLRVSSVSVMRSDH
SSICVSWRPVPAVSHYRIVIQALRDKQTKEETVDASSSSHCFSELQAETVYRISVHSRLG
TVEGAGVTILHPTATAPVRIQVPPRLHPVQREVCPEMVVRNHVVKGFNMMESFGLTQRAH
STVEGVAAEPFIFNTLPSYTLYRDVQLTQSTGFIHPAGFSPEHTISMAFRLLQDSPKEPF
ALWQLTDNDFQPKMGVVLDPVKKSLLYFSLDYRGEIQELTFDQPQVHSVFYGSFHKIHLS
VNQVSVSLSVDCQRVGERPARPLGTVPTDGFEMLGKLVRTRGPHSGSAAFQLQAFEIVCN
TTWPSEDDCCDLPSQRDEESCPEPAYACTCTSNVSGAPGDTGPPGKPGPRGEKGEKGDLG
QKGEMGPPGKPGPEGNFGSVGAAGPRGIAVMGKVGPPGARGEKGEVGRPGSQGLPGPPGP
KGEEGSPGPKGTRGLEGNIGPPGITGPRGFQGMPGHPGPAGERGPFGLVGPTGLPGSKGE
RGEKGEPQSLAMIYQLVTQACEKLVHSEVLKLDAFLNEINRQPVPIQEPVAPPGEPGLPG
GRGPPGSRGSQGRQGARGGPGKPGYPGEQGRRGMPGEKGSPGSNVLGPQGIKGLAGPPGE
SKTGEPGPKGEDGKAGPPGIPGAPGQQGEMGPPGACDNSGCYQGAPAAEDPYFGYQP
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgccgggccacagttctcttctctccttcatcctggtgacggttctcatgatgctggtt
tctgaagttcatacccaaggtcgactgaaactgaccgttctgtctgaagatcggctgcag
attaagtggaaggaagcagaaggtccagttcagggctacaaggtccgagtacggcccatt
acagaagttcctcagccagagctgatgctgacgaccacacatggtcgagccacggtggca
ggattggactccagacaggaatatctgctgcaagtcctggtgctcaatggaacacaagag
aaactcatagccaagagacgcttcaccattgatgggttgcgtgaggaggagttgattcgc
aatgggaacagagaacagaagaagaaaacacatgccatcggttctggctctggtgaggat
gatgacatcacagaggctcttgctgccctgcccacggtgctctacagaaaaccaacaact
acagcttcacctgagcttgagccagaagctaaagacaagaaaaagaagaaggacaagaat
cgatccaagactgaagataaaagtgatccagaagaaaaccgactgaagcctgtaagagag
gagatcaccaacactgacaaaacaaggaaaaccaccccaacccaacctgtcacagctgta
tccacgagaaagccgtttgagtgcggtgccggggcaaaggcagatgtcgttctgttagtg
gacggatcctggagcattggccgcaccaacttcagaaaggttcgtgacttcctggagggc
atggccgttccttttcacatcagtccagagggcgtgcagatagcattgtcgcagtacagt
ggagatccacgcacagagtggaaccttaataacttcacctccaaagagccgctactggag
gccatcaggaacttcagatacaagggaggaaacactttcacaggtcaggctctcattcat
gctcttgaaaacaacctaaaagaggaggccggagctcgacccgacacaccacagttcctg
ctgctgctgactgatgggaaatctcaggacgatgcgatcgctgcagccaatcggctgaag
aatgctggtgtggagatcattgctataggtgtgaagaatgcagatgaggcagagttgagg
caggtggcgtcagagcctctcgagctcaatgtgtataatgtgaatgattttcctctactc
agtaaactagttggaagactggcacgcatcctttgtggcaagattgaagaccgtattaaa
gccaagagaatggagcggcccactgaggacccagttctgtcttaccccaggccaactgat
ctacagtacgagtcagtaggttcgagggaggcgcgtttgcgctggataccacctagcaaa
agtccaaagcaatacagactggtttatcacacatctgaaggacaaggtctgatggagatg
gtggtgaatggatcagattcaacagcactgctgacaggactgacttcacagacacagtac
catctgtctatctttcctgtctatgaaaacaacgtaggttctgctctaagaggaacttta
actacactgccattggccatgcctaaagctctggaggtcacagcatcctcccccagcagt
ctgcgtgtacgttggcagccggctgcaggagccacacagtacatggcgctgtactcggca
ctcactgatggagaacccgatgatgccaaagaagtgaagtttggacctgctcagacggat
gtggagctggtggatctgatgccatccacagattattcagtcactctttatgctttatat
gatgaagaccccagcgatccagtcactgccctcggcaccacctttccgttgccgactcct
ctcagtttgcagtttcccatggtcagtcacagcactctaaaggtcacatgggtccctgga
gctgtcgatgttccctcccaccgtatcatctatagcaccaatcacggcagtgatgtgaaa
caggtggaagtcagaggagtgaacacagcgttgctgcagaatctcgcttcattatcaagg
tatctggtgtcagtgcagtcgctctatgagaaaggcttatccactcctgtcacagccaat
gtcactacattgaaggtaccggcaccctcagatctgagggtcactaacttctctggcagt
gacatcaccgtgcgatgggaacctgcggcggacgacgtggtctcgtacctcatcaaatgg
atctcccttagtggaggagacctcagacagcttacagtagatggggatagtgagggtgct
attttggaaggggtcgaggaggacaatgaatatcagatctcactgtctgcattatatgct
gatggggctcagagtgaggcagtggcaatacgatatagcaccttatcaggaggcggtccc
agcagtttatccatctcagaagagactgcagtcagtatggtggtcacttgggttcccccc
aatgctcacgttctgcagtatcgtgtgtcgtacacccccctcaccggggacgcaaaggag
aacacagtgtcattgccaggcagcgagaagcgcatcctgctgcagaatctgcagcccgac
acacgctacagtatcctggtgactgccgagtaccgtaacagggagggcgggagtgccaca
gctcaggggaggaccactagtctgcgggtgagcagcgtgagtgtcatgcggtccgatcac
tcaagtatctgcgtttcctggaggcctgtacctgctgtcagccattatcgcatagtcatc
caggccctcagagataaacagactaaggaggagacagtggacgcctcaagcagcagtcac
tgtttctctgagctacaggctgaaacagtgtatcgcatcagtgttcattctcgtctggga
acagtagagggcgctggtgtcactattcttcaccccacagcaaccgctccagtgaggatt
caggttccccctagactgcatcctgtacaaagggaagtgtgtcctgagatggtagtcaga
aatcatgtagttaaaggtttcaacatgatggagtcatttggtctgactcagcgagctcac
tccaccgttgagggggttgcagctgaaccattcatctttaacaccttaccaagttacacc
ctctatagagacgtacaacttacccaaagcactggcttcattcacccggctggcttttct
ccagaacacaccatcagcatggccttcagactgctgcaggattcaccgaaggagcccttc
gccctctggcagctcaccgacaacgactttcaacctaagatgggagtggtgctggaccct
gtgaagaagtcgttgctgtatttcagtctggactatagaggggagatacaagaactgacc
ttcgaccagccacaagttcattctgtcttttacggcagctttcataagattcatttgtcc
gtcaatcaggtgagcgtatcactgtctgtagattgtcagcgggtgggtgagagacctgcc
cgtccactgggaactgtgcccactgatggttttgaaatgctgggcaagctagtgaggaca
cgcggacctcacagtggatctgcagcttttcagctgcaggcttttgaaatagtctgcaac
actacctggccatcagaagatgactgctgtgatctgccctcacagagggacgaggagagc
tgtccagaacctgcttatgcgtgcacctgcaccagcaatgtttccggagcacctggagat
acaggtccacctgggaaacctggtcctcggggagagaagggagagaaaggagacctggga
cagaagggtgaaatgggcccaccgggaaaaccaggacctgagggcaactttggctctgtt
ggagccgctggtccacggggaatagcagtaatgggaaaagtgggtccgccaggagcgaga
ggtgaaaaaggagaagttggaagacctggtagtcagggtttaccagggcctcctggtcca
aaaggtgaagagggcagccctggtcctaagggtaccagaggattggagggtaacatcggt
cctccaggaattacagggccaagaggttttcaaggtatgcctggccatccaggaccagca
ggagaaagagggccatttgggcttgtagggcccacggggcttcctggaagcaaaggtgaa
agaggagagaagggagagccacagtctcttgccatgatctatcaacttgttacacaagcc
tgtgaaaagcttgtacacagtgaggtgctgaagttggatgcatttctgaatgagatcaat
cgacagccagtgcccatccaggaaccagtagcaccaccaggagagccaggcttaccgggg
ggaagggggccgcctggatcacgcggatctcagggaagacaaggagccagagggggacct
gggaaacctgggtaccctggtgaacaggggcgcagaggtatgcctggtgaaaagggctct
ccggggtccaatgtcctgggaccacaaggaataaaaggacttgcaggacctccaggtgaa
agcaaaacgggtgaaccaggccccaaaggagaagatggtaaagcaggacctccaggtatt
ccaggagcaccgggacagcaaggtgaaatgggtcctcctggtgcatgtgacaacagtgga
tgttatcaaggagctcctgctgcagaggatccatactttggataccagccttga
DBGET
integrated database retrieval system
