Paramisgurnus dabryanus (large-scale loach): 135775687
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Entry
135775687 CDS
T10799
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135775687 (tfip11)
Spliceosome [BR:
pdab03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
135775687 (tfip11)
Other components
Complex C specific factors
135775687 (tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
135775687
NCBI-ProteinID:
XP_065142173
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Position
21:18516985..18522328
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AA seq
834 aa
AA seq
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MSMSHLYGRRGDDDDEGEDGVEIEKFEVTEWDLANEFNPERRRFRQTKEQATYGIWAEHD
SDEERPSFGGKRAKDYSAPVNFISAGLRKTAAEEKAEHEGSDESSQEDTPPPTRTAASKK
LQTGGSFKTSQRFAGGIKTGKDLGSWEKHTRGIGQKLLQKMGYVPGKGLGKNAQGIVNPI
EAKLRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFQQALGQWRKEAGVAKKKPKYS
YKTVDELKAHGKLTSRNMSRPAGELSQVKVIDMTGREQKVYHSYSQMSQKHSIPEETPLN
VSVREQKSSGFALPELEHNLKLLIELTEQDILQSARRLQHEKDTVVTLTHEGDALQSRLA
EEDEALGRLENVLELVERFEAGDMDGSPTLSLQECAMVFQQLQTEFYQEYKTLGLGDLAV
SVVHPLLKEKLRSWEPLKDCSDGLEEVGQWRAILENPQSLHSGPDSSQMDPYHRLIWEVW
IPVMRTCVSQWQPRNVGPMVDCVECWAPVLPMWILDHVAEQLIFPRLQREVDNWNPLTDT
VPIHSWIHPWLPLMQTRLEPLYAPIRSKLAHALQRWHPSDSSARLILQPWKDVFTPGAWE
AFMVKNIVPKLALCLGELVVNPHQQLLEPFNWVMDWEGMLSVSTMVGLLDKNFFPKWLQV
LCSWLSNNPNYEEITKWYLGWKSLLSENLLSHPVIKDKLNEALDIMNRAVASGLGGYMQP
GARENIAYLIQTERRKDFQCEPQPERREIENSVPRPPGTSQIPTSVPTNFKDLVQAKAEE
NGIVFMPLVAKRHMGKQLFTFGRIVIYIERGVVFVQGEKTWVPTSLQSLVDMAK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatttgtatgggcgtagaggggatgatgatgatgagggtgaggatgga
gtggaaattgaaaaatttgaggtgactgagtgggacctggccaacgagttcaacccagag
agacgcaggttcagacagactaaagaacaagcaacatatgggatttgggcagaacatgac
tctgatgaggagagacccagctttggaggcaagagagcaaaggactactcggcacctgtt
aactttataagtgctggcttacgaaagacagcagctgaagagaaggcagaacatgaaggt
tcagatgagtccagtcaagaagatacaccacctccaacccgcactgcagcttccaaaaaa
ctccagacgggtggaagctttaagacatcccagagatttgcaggtggcattaaaacaggg
aaagatctgggatcgtgggagaaacacacacgaggcattgggcaaaaactcctgcagaag
atgggctacgttccaggaaaaggacttggcaaaaatgctcagggtattgtgaatccgatt
gaggctaagctgaggaaggggaaaggagcagttggtgcatatgggaatgaaagaacccag
cagtctctgcaggatttccctgttgtagactccgaagaggaggaggagaaagaatttcag
caggcattgggccagtggcgtaaggaggcgggagtggccaagaaaaagcccaaatattct
tataagacagtggacgaactaaaagctcatggcaaactgaccagcaggaacatgagcaga
ccagctggggagctgtcacaggtcaaggtgatagatatgacaggcagagagcagaaggtg
tatcacagctacagtcaaatgagtcagaagcacagcatccccgaagagacccctttgaac
gtgagcgtacgggaacagaagagttctggcttcgctctgccagaactggaacacaatctt
aaactgctcattgagcttacagagcaagatatcctgcagagtgcacgtcgtcttcagcac
gagaaagacacagtggtcactctgacccatgagggcgatgccctacagagcagattggcc
gaggaggatgaagctcttgggaggctggagaatgtcctggaactggtggagcgttttgag
gcgggtgatatggatggcagtcctacgctcagccttcaggaatgtgccatggttttccag
cagctgcagacagaattttatcaggagtataagaccttgggattgggcgatctagctgtg
tctgtcgtgcatcctctacttaaagagaaacttcgcagttgggagccactcaaggactgt
tcagatggtttggaggaagtcggtcagtggagggccattcttgaaaacccacagtctctt
cacagcggaccagacagttctcagatggacccttatcacaggttaatatgggaggtgtgg
attcctgtcatgaggacctgtgtgtctcagtggcaacccagaaatgtggggccaatggtg
gactgtgtggaatgctgggcccctgtgttaccaatgtggattctggaccatgttgctgag
cagctcattttcccacgactgcagagagaggtggacaactggaacccactgacagatacg
gtccccattcattcatggattcatccttggctgcccttgatgcaaacccgcctcgagccc
ctgtacgcaccaattcgaagtaaacttgcccatgctttgcagcgttggcaccctagcgat
tcttccgccagacttattctacaaccctggaaagatgtctttacacctggtgcatgggag
gccttcatggtgaaaaatattgtcccaaagcttgctctgtgtttaggagagctggtggta
aatcctcatcagcagctgttggagccgtttaactgggtgatggactgggagggcatgttg
tcggtctctaccatggtgggactgctggataagaatttctttcccaaatggctgcaggtg
ttgtgttcctggctcagtaacaacccgaattatgaagaaatcactaagtggtatctgggc
tggaagagcttgctgtcagagaaccttctcagtcacccagtgatcaaagacaaactgaac
gaggctcttgacatcatgaaccgtgccgttgcttctggactgggtgggtacatgcaacct
ggagcaagggagaacatcgcatacttgattcagacggagagaaggaaagatttccagtgc
gagcctcagccagaacgccgtgaaattgagaattctgtcccacgtcccccaggcaccagc
caaataccaacatcggtacccaccaactttaaagacctagtccaagctaaggctgaggag
aatggcattgtcttcatgccacttgtggccaaacgacacatgggcaaacagttatttaca
tttggcagaatagtcatctacatcgagcgtggagtggtcttcgtccaaggagagaaaacc
tgggttccaacgtcattacaaagcttggttgacatggctaaatga
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