Paramisgurnus dabryanus (large-scale loach): 135775814
Help
Entry
135775814 CDS
T10799
Symbol
prpf6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135775814 (prpf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135775814 (prpf6)
Spliceosome [BR:
pdab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
135775814 (prpf6)
Complex C
U5 SnRNP specific factors
135775814 (prpf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_2
TPR_17
TPR_8
TPR_1
FAT
ARM_TT21_2nd
TPR_CcmH_CycH
ARM_TT21_N
T7SS_EccA1_N
ARM_TT21_C
TPR_21
ARM_TT21_5th
Dehydratase_MU
Motif
Other DBs
NCBI-GeneID:
135775814
NCBI-ProteinID:
XP_065142397
LinkDB
All DBs
Position
21:23721382..23746200
Genome browser
AA seq
974 aa
AA seq
DB search
MASANAKQPAKNASKASAGGTGGAAGGAQPPPLASPLMGGLNKKKKPFLGMSAPLGYVPG
LGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKNQEEDEEDLNDTNYDEFN
GYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERRELREKEEIEKYRMERPKIQQQF
SDLKRKLAEVTEDEWLSIPEVGDARNKRQRNPRHEKLTPVPDSFFAKHLQTGENHTSVDP
LQGQFSGLNTPFPGGLNTPYPGGMTPGAGDLDMRKIGQARNTLMDMRLSQVSDSVSGQTV
VDPKGYLTDLNSMIPTHGGDISDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQV
ARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIR
AKKRVLRKALENVSKSVRLWKTAVELEEPEDARIMLSRAVECCPTSVELWLALARLETYE
NARRVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLGANGVEINREQWI
QDAEECDKAGSVATCQAVIRAVIGIGIEEEDCKHTWMEDADSCVAHGAVECARAIYAHAL
QVFPSKKSVWLRAAYFEKSNGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAA
RSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVRLEWV
LGNIEAAQDLCTEALKHYEDFPKLWMMKGQIEEQTENMDKAREAYNQGLKKCPHSMPLWL
LLSRLEEKVGQLTRARAILEKARLKNPQTPEIWLESVRLEYRAGLKNIANTLMAKALQEC
PSSGILWAEAVFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFLRT
VKIEPDLGDAWGFFYKFELQHGTEEQQAEVKKRCENAEPRHGELWCADSKHIHNWQKNIG
EILVLVASKIKNTF
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgctaatgcgaaacaaccggcaaaaaatgcgagtaaagcctcggccggaggc
accggtggggctgcaggcggtgcccagcctccgccgctcgcgtctccgctcatgggcggg
ttaaataaaaagaagaaaccgtttctgggcatgtccgcgccgctcggatatgtgcctggt
cttggcagaggtgctacgggtttcaccacgcgatctgatatcggtcctgcccgtgatgca
aatgacccagtggacgaccgtcacgcgcctccgggcaagaggacagttggtgatcagatg
aagaagaatcaggaggaggatgaggaggatctgaacgacactaactatgatgagttcaac
ggctatgcgggcagtcttttctctagtgggccatatgagaaagatgacgaagaggcggat
gccatctacgctgccctggataagcgaatggatgagaggcgcaaggaaagaagggagctg
cgggaaaaggaagagatcgagaaatatcgtatggagcgtcccaaaattcaacagcagttc
tcagatctcaaaaggaagctggctgaggtgacggaggatgaatggttgagtatccccgaa
gtgggtgatgccaggaacaaacgtcaaaggaacccacgtcacgagaagctcacacctgtt
ccagacagtttctttgccaagcatcttcagactggagaaaaccacacatctgttgaccct
ctgcaagggcaatttagtggtctgaacacaccattcccaggcggcctgaacacaccctac
ccaggaggcatgacaccaggcgcaggagatctggatatgaggaagattggtcaagccagg
aacactctgatggacatgaggctcagtcaggtttctgactccgtgagtggacaaacagtt
gttgatcctaaaggctatctcaccgatctcaactctatgattcccacccatggaggagat
atcagtgacattaaaaaagcacgtctactattgaagtcggtgagagaaacaaatccccac
caccctcccgcctggatcgcctccgcacgtttggaagaagtgacaggaaaactgcaggtg
gccagaaacctcatcatgaaaggcactgaaatgtgtcctaagagtgaggatgtgtggcta
gaagcggcccgactacagccaggagacacagcaaaggccgtggttgcccaagcagtgcgt
cacctgcctcagtctgtgcgcatctatatcagagctgctgaactagagacggacatcaga
gccaagaaacgagtgcttaggaaagctttggagaacgtgtctaaatcagtgcgcttgtgg
aagactgctgttgaactggaggagccagaagatgctagaatcatgttgagcagagcagtc
gagtgctgccctaccagtgtagagctctggttggcacttgcccgcttagaaacgtatgag
aacgctcgtcgggttctgaacaaagctcgtgaaaacattcccacagaccggcatatctgg
atcacagctgccaagctggaggaagccaacggaaacactcagatggtggaaaagatcatc
gacagagccattacctcactgggggccaacggtgtggagataaaccgcgagcagtggatt
caggatgcggaggagtgtgataaagccggcagtgtggccacatgtcaggctgtgatcaga
gctgtaattgggattggcattgaagaggaggactgtaaacacacatggatggaggacgct
gacagttgcgtggctcatggcgctgtggagtgtgcccgtgccatctatgcccacgcactt
caggtctttcccagcaagaagagcgtatggctgagggccgcttacttcgagaagagcaat
ggcacacgagagtctctggaggctctgttacagagggctgttgctcattgtcctaaggct
gaggtgctgtggttaatgggggctaaatctaaatggctagcgggcgatgttccagcagcc
agaagtatcttggctttggccttccaggctaaccccaacagtgaggagatctggctggct
gctgtgaagctggaatcggagaacaatgaatacgagagggcgcgcaggctgttagccaag
gcccgcagcagcgcccccactgccagggtgtttatgaagtcagtgaggctggagtgggtg
ctgggaaatattgaagcagcacaagatctgtgtacagaagccctaaagcattatgaagat
ttcccaaaactctggatgatgaaaggtcagatcgaagaacagaccgagaacatggacaaa
gcgcgagaggcatataaccagggtctaaagaaatgcccacattccatgccattatggctt
cttctgtcccggctggaggagaaagttgggcagcttacacgagctcgagccatcctggag
aaagcacgactcaagaacccacaaacccctgagatatggttagagtctgtcagacttgaa
tacagagcaggattgaaaaatatagccaacacgcttatggccaaagccctgcaggagtgt
cccagctctggcattctttgggccgaagcagtttttctggaggccaggcctcagcgcagg
accaagagcgttgacgctctaaagaagtgtgaacatgatcctcatgtactgttggcagtg
gccaaattgttctggagtgagagaaagataacgaaggcgagagaatggttcctgcgcact
gtaaagatcgagccggacctgggcgatgcatggggattcttttacaagtttgagcttcag
catggaacagaagagcagcaagcggaggtgaagaagcggtgcgagaacgccgaaccgcgg
cacggcgaactctggtgtgccgattccaaacacattcacaactggcagaagaacatcgga
gaaatcctggtcctcgtggcttcaaagatcaaaaacacattttga
DBGET
integrated database retrieval system
