Paramisgurnus dabryanus (large-scale loach): 135775888
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Entry
135775888 CDS
T10799
Symbol
cica
Name
(RefSeq) protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135775888 (cica)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135775888 (cica)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
135775888
NCBI-ProteinID:
XP_065142530
LinkDB
All DBs
Position
19:complement(6240597..6266606)
Genome browser
AA seq
2450 aa
AA seq
DB search
MKPIKKQGRRSPPSTRAKGVKRRTADCSPQEDKRETEEKPQTSPTSPKRHISSNSDSSQE
GPVRSGSPEKEGIQSDIAGVCGKADERPGSSKSAGTQSDSNSSTASASSSPNPSSRKTAT
FKARVPKKKYTSEHFAGNHGNASTPNTPPQSSHSSSHNGADASQGPADYATHTDTHSQSQ
LAEDSIAGYSHNSLTVPTVRAASEGGERDGISASSPQRCSSTDTASEHSADLEGTASGLD
SHHKSQKPQTHSTSAPSQESLSSCLDGVLAKGLKNQRVLARQGSRLGDGWPPDRGRDMSG
VFRAGVVRRVGEEHGIVEVQLNGEKTMCKYPFRVATDFVDLILDAPPPGIAPVAIGTRVC
IPFGGGNEGSEGVQQWYREGIITQVDQHPAVSFPYRVQLREDLSDERKERRGGEEDGRGI
NAQAVWVSRQNLRLLVPPWDLEPPQPADPGIGGRRGREREWEEREEMEVEQEVVRLTRPS
YGVENLLHPVSVPFTSPLSSSSTVSTAITPVLSVAPNRDWEHSREKDHERDRDLQRHFER
EREREMERHKHHPLHPSTPEEDMEVSRLSQHIDGGLTAAIGNKALGVPSQHRPILSKPNY
LSSHPHPHLSMVRGLSTPIAPHLQLAPHPNHPPVVLGLDSATGAAVISSTPQMPPLPPIS
SRASLDKTPGSNSHSASGGGGSSSSSSSSRSRTPLTAAQQRYKKGDVVCTPTGIRKKFNG
KQWRRLCSREGCSKESQRRGYCSRHLSMRTKEMEAGGGVGRDRSGASSTGTLTPDMRLGG
RTSSEYDWDDNSRDSSEASSRGGDSRPRLVMTSLIPQELSRDLSRFDFDECEAANMLVSL
GSSRSCTPSFSPVSNQSPFSPAPSPSPSPLFGFRPANFSPITAPSPLTPRRPRHLSGPKI
PGTPNTERERHLSGIVPTFQTNLTFTVPMSPSKRKLDAPPPPIPSASDYVKSDPQMNDPT
LGLNAAGFRVMSPQSQPTTPSSLSFSRQRSTTSRPSSSAASTPPPMLVSPTPPSPLPQDP
SSRRIVPLRDSPVIVRNPDVPLAKFSDGPLGRRGNSRSREHSHHPHLAVGLQAPVPINGA
TTNGAVLLRNPAPTLVLVTSSQSLTPVAPGHPTHSNSTTLNVSTSNTGPVLAISGSGGKE
QERKPGGHADAGGGSLPQPVACHPSPTALLPLILPAESPHPAPRKDIIMGRPGTVWTNVE
PRSVPVFPWHSLVPFLETSQSKISMQPTDGQTLVNQSKEPRCGVALVSEGRVDQPTPERG
SPTCPPPSADDPPVERDGGDSETESDADDLFFQGGAQDSSPSTGAKRRSQSLSALPKDGD
KKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDL
AFQVKEAHFRAHPDWKWCNKDRRKSLSEGRGTPGAKEARERSMSESTEGHPASQGPEIKG
AGPSWNSPRSDGHGGQHQRPRAFSQSAVHNLESRVDERELENDGLFPPRRPADHLFRRRV
SEDVTSDEERMVICEEEGDDDAIDDAFAEGSIDLKCKERVTDSDDDNDHADEADCKRPFH
PVHSSLAFSPGKDGLENMEKKKRRGMEGAEQENGGPREGKGREGGLMGGGGGGQVPPHPN
STPVASMSATLPRGAEMYHAQGPVRMAPTIVTNVVRPITSTPIPIASKPADGSVLPFDGK
SKLLIGAGGAAGAGYISSSSPKPNSQGSLVTGLVLGGPFSNQPTVQLITPSHPTPCNGTA
GNSAVPLPIIHPQFLPAASITTSSGGKPVTQVQYILPTLPATTNPNSPSSQQPSGVLALT
NAPPTHVTLANGVHSGAGHGIRYASVPAVGGVSPVGGVQAQSPVLQSKMLVPMATVGTGS
TPPQPISLVGPPLPVQNGAQPGSKIIQIAPMPVVQANVHPGGSVHTGSSFPVSMATAAVM
ASGPTPPQTVLLTPPPTRITYVQSTPGVATPLPLGSTPAVSSAQQAPSPAGPSFLQSPMA
TLGFTAIAPAGQTLVQPIVASQPPFLAPCPTPSGPSQPAQSSTATRQLVTAIYPTGSHTG
GVVSVTAVPHSSASSASTPVTSSSPQIKTSNATAQQADAQIQSQENMQMEGERGPESRKD
TETEREQIMSKDGHQIPSSGVEEAVQPTGTSHTYTGQQCEGKDDGNKWSKTEREYERNTE
GVSSQTERAERMSALEEETETQAETNSKDAGRRDACALDPPPPPVQTDTPSTKKTKFRPP
PLKSTTDAADKVLFGSSFEERLAELPEFKPEDILPSPNLQSLATSPRAILGSYRKKRRNS
TDLDSADDPSSPRRKSRRLSSCSSEPNTPKSAAKCEGEIFTFDRAVGETEHILEVPPSSL
RRMLDQRRVLVMQLFQEHGFFPSAQATAAFQSRYSDTFPNKLCLQLKIREVRQKIMQTAG
SSDVLGPGVSDPASTPGSSNPAPRENSEPEERGRNSEEPKKDAGDPQDAK
NT seq
7353 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccatcaaaaaacaagggagacggtcaccaccctccactcgtgccaaaggcgtt
aagagaaggacagcagattgtagcccacaagaagataagagagaaacagaagaaaaaccc
caaacttcacctacctctcccaagagacatatctcctcaaattctgactcatcacaggaa
gggccagtgagaagcggatctccagaaaaggagggtatccaaagtgacatagcaggggta
tgtgggaaggcggatgaacggcctgggagctccaagtcagccggaacacagagcgatagc
aacagtagcacggccagtgccagcagtagccccaatccttctagtcgcaagacggccact
tttaaggcccgtgtgcccaagaagaagtacacttctgagcactttgctggaaaccatggt
aacgccagcactcccaacacacccccacagagcagccacagcagctctcacaacggtgct
gatgctagccagggcccagctgactatgctacacacacagacacacacagccaaagccag
ctggctgaagacagcatcgctgggtactcgcacaacagtttaactgtgcctacagtaaga
gctgcatctgagggaggagagagggatggtataagcgcatccagcccacagcgttgttcc
tccacagatacagccagtgagcactcggctgacctagaagggacagcttcaggacttgat
tctcaccataaatcccaaaagccacaaacacatagcacttcagcaccatcacaggagagc
ctgtcatcttgtttagatggagtccttgccaagggtctcaagaatcagagagttttggca
cgacagggctctagattaggggatggatggcctcccgatcggggccgagatatgtcagga
gtgtttcgtgctggcgttgtacgtagagtcggcgaggagcatgggattgtggaggtgcag
ctaaatggagagaagaccatgtgcaagtacccttttcgagtggctacagattttgtcgac
ctaattttagatgcaccccctcctggaatagccccagtggctataggcacacgagtttgc
attccctttgggggaggcaatgaggggagtgagggagtgcagcaatggtacagagaaggc
ataatcactcaagttgatcagcatcctgctgtgtctttcccgtaccgtgttcagctacga
gaggatctatctgatgagcgaaaggagaggagaggtggagaggaagatggtagggggatc
aatgctcaggctgtttgggtctcacgacagaatctacgccttttggttcctccttgggat
ttagagcccccccagccagctgatccagggattggtggtaggagggggagagaaagagaa
tgggaggaaagagaggagatggaagttgagcaggaggtggttcggctgaccaggccatca
tatggagtagagaatttgctgcatcctgtttctgtaccttttacatcacccctttcttca
tcctctactgttagcactgccatcacccctgtactcagtgtagctccaaatagagactgg
gaacatagcagagagaaggatcacgagagagatagagacttgcaaaggcacttcgaaaga
gaaagagagagagaaatggagaggcacaaacatcatcctcttcatccatccactccagag
gaggacatggaggtcagccgtcttagccagcacattgatggtggcctcactgcagccatt
ggaaacaaagctctaggggttccttctcagcatagacccattctttctaaaccaaactac
ctcagttctcacccccacccccacctttctatggtgagaggcctcagcaccccaattgcc
ccccacctgcaacttgctcctcatccaaatcatcccccagtagtcttgggcctggactca
gctacaggggcagcagttatttcctccacaccccaaatgcctcccctgcctcccatttct
tcaagagcctccctggacaagactcctggctccaattcacacagtgcttctggagggggt
ggatctagctcctcttcctcttcatcacgttcccgcacacctctcacggccgctcagcag
aggtacaagaaaggtgatgtggtgtgcacccctacaggcatccgcaaaaagttcaatggc
aagcagtggcgtagactatgctcccgtgagggctgctcaaaagagtcgcagaggcgtggc
tactgttcccgccatctctctatgcgcaccaaggagatggaagctggaggtggagtaggc
cgagacagaagtggtgccagtagcacaggcactctgacacctgacatgcgtttaggtgga
cgtaccagcagtgagtatgactgggatgacaactcacgagacagcagtgaagccagcagc
cgtggaggggactctcggccacgtctggttatgacctctctcattccacaagaactgtca
cgagatttgtcccgttttgactttgatgagtgtgaggctgcaaatatgctggtgtcactt
ggtagctcacgctcatgcacaccttccttctcacctgtatctaatcagtcaccattttcc
cctgcaccgtccccttccccctctccactatttggctttcgtccagctaatttcagccct
atcacagcaccttcacctctgacccctcgccgccctcgtcacctcagtggcccgaagatc
ccgggcacccccaacactgaacgagagcgccacctctccggcattgtgcccaccttccag
accaatttgacattcaccgtccctatgagccccagtaaacgcaaactggatgccccacca
cctccaatacccagtgcatcagactatgttaaatctgatccccagatgaatgaccctaca
cttggtttgaatgcagcaggattcagggttatgtctccccaaagccagcctacaacccct
tcttctctttcattttctcgacagaggagcaccacaagtcggccgtcatcctctgctgcc
tctacccctccccccatgttggtttcccccacaccaccctcacccctgccacaggatcct
agctcacgacgcattgttcctctgcgcgattcacccgttattgttcgtaatccagatgta
ccactcgcaaagttcagcgatggtcccctgggtcgtagaggaaactcgcgctcaagagag
cacagccatcatcctcacttagctgtgggactccaggcccctgtgcctattaatggcgcc
accaccaacggagcggttcttcttcggaatcctgcgcccaccttagtcttggtgacctcc
tcccagtcactgacacctgtggctcccggacatcccacccattcaaactccaccacttta
aatgtgtctacctctaatactggccctgtccttgcaatatctggttcaggaggaaaagag
caagaaagaaagccaggtggccatgcagatgcaggtggtggttctttaccacagcctgtg
gcttgccatccttcaccaaccgccctgttacccctcatcctaccagctgagtcccctcat
cctgctcctcgcaaggacatcattatgggacgacctggcactgtctggaccaatgttgaa
ccccgctctgtaccggttttcccatggcattcattggttccttttctggagacaagccaa
tcaaaaatatccatgcaacctacagacggccaaacacttgtaaatcagagcaaagaacca
cgctgtggagttgcgcttgtgtctgagggacgtgttgaccaaccaacaccagagagaggt
tcaccgacctgccctcctccttctgctgatgatccacccgtggagagagatggaggcgac
agtgagacagagagtgatgctgatgatcttttttttcaaggtggagcccaagattcttct
ccatccaccggtgcgaagcgacgctcacagtctctcagtgcactgcccaaagacggtgac
aagaagagggaaaaggaccacatcagacgcccgatgaatgcctttatgatctttagtaag
cggcatcgtgcgctcgtgcaccagcgacacccaaaccaggacaaccgcacggtcagtaaa
atactgggcgagtggtggtacgcgctgggacccaaagagaagcagaagtatcatgacctt
gccttccaggtgaaggaggcacacttccgggctcaccctgattggaaatggtgtaacaaa
gataggaggaagtctctgtctgagggccggggaactccaggggccaaagaagctcgcgag
cgcagcatgtctgaaagcacagagggccatcctgcatctcaggggccagaaatcaaagga
gcagggcccagctggaattcaccccgatctgacggtcacggagggcagcatcagcgacct
cgtgcattttcccagagcgctgtacataatctggagagtagggtggacgagagagagcta
gaaaacgacggtctgtttccaccccgtcgccctgctgaccatctgtttcggagacgggtg
agtgaagatgtgaccagtgatgaagagcgtatggtgatctgtgaggaagagggggatgat
gatgccatagacgacgcatttgctgagggctctatagacttgaagtgtaaagagagagtg
acagacagcgacgatgacaacgaccatgcagatgaagccgactgcaagcgccccttccat
cctgtccattcctcgttggcgttttctcctggaaaagatggtctggaaaacatggagaag
aagaaaaggaggggaatggagggagcagagcaagagaatggagggcccagggaagggaaa
ggaagagaaggtggactcatgggaggaggtggagggggacaggttcctcctcaccctaat
tcaaccccagtggctagcatgagtgctacattgcctcgcggtgcagagatgtaccatgca
caaggccctgtcaggatggcccctaccatagtgaccaatgttgttcggcccatcacgagc
acccctatccccatcgccagcaaaccagccgacggaagtgtcctgccatttgacggaaag
tccaagctattgattggtgctggtggagcggcaggggctgggtacatatcctcttcttct
cccaaacctaacagccaaggaagtttagttaccgggctagtcctgggaggccccttttct
aaccagcccacagttcagcttattaccccgtcccatcctactccatgcaatggaacagcc
ggcaacagtgccgtaccccttcccataattcatcctcaattccttcccgctgcctctatc
acaacgtctagtggtggaaaacccgtgacgcaggtgcagtacatccttccaacgctgccc
gcaacaaccaatcctaacagtccttcctctcagcagccatcaggtgtccttgctttgacc
aatgctccgcccactcacgtgacactagccaatggggtacactcaggggcaggccatgga
attagatatgcgtctgtcccagcagtgggaggagtcagcccagtaggtggagttcaagca
cagtctccagtcttgcagagcaagatgctggttcccatggcaactgtcggaaccggatcc
acacctccgcagcctatttccctggtgggcccaccccttcctgttcaaaatggggctcaa
ccaggaagcaagatcattcaaattgcaccaatgcctgtggtccaagcaaatgtgcatcct
ggaggatcagtgcatactggtagctccttcccagtctctatggcaactgcagctgtcatg
gcttctggccccacccctccgcagacagtacttttgacgccaccacctacaaggatcaca
tatgtacagtcaactcctggagtagccacacctctaccattgggatctacacccgcagtc
tcctccgcccaacaggctccatcacctgcgggtccatcatttttgcaatctccaatggcg
acacttggctttactgcaattgccccagctggccagactttggtgcaacctattgttgca
agtcagccacccttcctggctccatgtccgaccccaagcggtccgtcacaacctgcacaa
tcctcaacagccacccgtcagctcgtaactgccatttacccaactggtagccacaccgga
ggggttgtgtcagtaacagccgtgcctcacagctcagcaagttctgcatcgacaccagtg
acatcttcatcacctcaaatcaaaacctcaaacgcgactgcgcagcaggcagacgcgcag
atacagtctcaggaaaacatgcagatggagggtgagagaggaccagagtctagaaaagat
acagagacagagagagaacaaataatgtcaaaggatgggcatcagataccatctagtggt
gtggaggaagcggtgcaacccactggtacctcacacacatatacaggtcaacagtgtgaa
gggaaggatgatggaaacaaatggagcaaaacagagagagagtacgagagaaatactgaa
ggggtctcgtctcaaacggagagagctgagaggatgagcgcattggaagaagagacagag
actcaagcggagaccaacagcaaagacgcaggacggagggacgcctgtgctctggaccct
ccaccgcctcctgtgcagactgacaccccttccactaaaaagaccaaatttcgcccacct
ccacttaaaagcaccactgatgccgctgacaaggtgttatttggctcctcctttgaagag
cgtcttgcggagttgccggagttcaagccagaagatatactgccctctcccaatctacag
agtctagcaacttcacctagagccatactgggcagttaccgcaagaagaggagaaactcc
acagatctagattctgctgatgacccaagttcaccgaggaggaagagtcgccgtctttcc
agctgcagctcggagcccaacacacctaaaagcgctgccaagtgtgaaggagaaatcttc
acctttgacagggccgttggagagactgagcatattttggaggtgccaccctcgtctttg
cgtcgcatgctggaccagcggcgggttcttgtaatgcagctgtttcaggaacacggcttc
tttccctcagcgcaagccacagctgcctttcaatctcgctactccgacacttttcccaac
aagctgtgcctgcagctgaagatccgcgaggtgaggcagaagattatgcagacggccggc
agttcagacgtcttggggccaggagtctcagaccccgcctctactccaggatcatccaat
ccagcacccagggagaattctgagccagaagaaagagggaggaattcggaggagccaaag
aaagacgcgggcgatccgcaggacgcgaaatga
DBGET
integrated database retrieval system
