Paramisgurnus dabryanus (large-scale loach): 135776271
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Entry
135776271 CDS
T10799
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03320
PPAR signaling pathway
pdab04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
135776271 (rxrba)
03320 PPAR signaling pathway
135776271 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135776271 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pdab03310
]
135776271 (rxrba)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
135776271 (rxrba)
Nuclear receptors [BR:
pdab03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
135776271 (rxrba)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
135776271
NCBI-ProteinID:
XP_065142928
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All DBs
Position
19:complement(7114769..7136765)
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AA seq
479 aa
AA seq
DB search
MGDSRDSRSPDSSSVSSPPSGQRSPPLAPSAASMTSLPPMTSAVNSPISSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQIMFPRNMEINSTVSMSGLHAVSSSDDVKPPYGLKPLSS
HSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCMVDKR
QRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKEREGEVESTSAANEEMPVEKI
LEAEMAVEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDDQ
VILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEVG
AIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEAY
CKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagtagagattcccgcagtccagacagctcatccgtatcctcacccccatca
ggccagcgttcgccaccactggccccatcagccgcctccatgacctctctgccacccatg
acatcagcggtgaacagccccatcagcagcatgggctcacctttctcagtcatcagctcc
tctctgggttctccctgccttcctggaactccttctgtgggctatggacccatcagcagt
ccacagatcatgtttcccagaaatatggagatcaactctaccgtgtccatgtcgggcctg
cacgctgtcagcagctctgatgatgtgaagccaccatatggtttaaaaccgctgtcctcc
cacagccccgggccaatggtctcacagaaacgcttgtgtgccatttgtggggatcgatct
tctggtaagcactatggagtttacagctgtgagggatgcaagggctttttcaaacgcact
gttagaaaggacctaagctacacgtgcagagacaacaaggactgtatggtggataaacgt
cagaggaaccgctgccagtactgccgctaccagaagtgcctggccatggggatgaagaga
gaagtggtccaagatgaacgacaacgatccgttcaggaggagcgtcagagaaacaaggag
cgggaaggcgaggtggagtccaccagtgctgccaacgaagaaatgccggtggagaagatt
ctggaggcagagatggccgtggagcagaaaaccgagctgcatgcggatggcagctcaggg
ggaagttctcccaatgatccggtcactaacatttgccaggccgccgataaacagctcttc
actttggttgaatgggcgaaacgaatccctcacttcagtgagctctcattggatgaccaa
gttatcctgctgcgagccggctggaatgagcttctgatcgcttcattttctcatcgatcc
atcacggtgaaggacggcattctgctggccactggtcttcacgtgcacaggaacagtgct
catagcgcaggggtgggagccatttttgacagggagagtgcgcacaatgcagaggttggg
gccatattcgacagggtgctgacggagctggtgagcaagatgagggacatgcagatggac
aaaacggagttgggctgtttgagagccattatccttttcaacccagatgcaaagggattg
tcaagcccaagcgaggtggagctactgcgagagaaagtctatgcatcactggaggcttat
tgtaaacagagatatcctgaccagcagggaagatttgctaaactcctcctccgactgcca
gcactgcgttctattggattaaagtgtctggagcacctgttcttctttaagctgatcggc
gacaccccaatcgataccttcttaatggagatgcttgaagctcctcatcagctgacctag
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