Paramisgurnus dabryanus (large-scale loach): 135776376
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Entry
135776376 CDS
T10799
Symbol
gria1b
Name
(RefSeq) glutamate receptor 1b isoform X1
KO
K05197
glutamate receptor 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04080
Neuroactive ligand-receptor interaction
pdab04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135776376 (gria1b)
04082 Neuroactive ligand signaling
135776376 (gria1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdab04040
]
135776376 (gria1b)
Ion channels [BR:
pdab04040
]
Ligand-gated channels
Glutamate (ionotropic)
135776376 (gria1b)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
135776376
NCBI-ProteinID:
XP_065143105
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Position
18:complement(17346856..17401922)
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AA seq
922 aa
AA seq
DB search
MRQSLALLFTGLLGLVSGSSFPSNINIGGLFPTDSHEYDVFRFALSQHNDVPKLVPQVDM
VDTGSSFAMTYAFCSQFSKGVYAIIGLYDRRTMNMLMSFCGALHVCFVTPSFPIETNNQF
VIQLRPELQDALIALVEHYRWTKFVYMYSSDSGLTVLQKILDTAAEKTWQVTSINFDTLT
EAAFLKVIQDLDNKKEYKIILDCELERLNSILNLIAVQKKNLKNYHYILANLGFMDLNLT
EFRKGGANLTGFQLMNYTDPAVSRMIQDWLEFDSKDLKSPKRRLKYTGALTYDGVTVMAT
AFQNLRKQRIDVSRRGNAGECLANPPAPWGQGIDIQRALQQVKFEGLTGNVQFNDKGHRT
NFTVSVMEFSPTGPKKVGYWNEHEKYVSTATYTNMLNETYGLQNRTYIVTTILESPYVML
KKNHEQLIGNDKYEGYCVELAAEIAKHVGYSYRLELVGDGKYGARDSETKMWNGMVGELV
YGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMC
IVFAYIGVSVVLFLVSRFSPYEWHTDDEDDGTEQQNQNQNQPPSPEANQSPNQHGQNQNQ
RDDKQEKQPEHNNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSY
TANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDGGSTKEFFRRSKIAVFEKMWSYMKA
AEPSVFVKTTDEGVVRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVAT
PKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVF
YILIGGLGLAMLVALVEFCYKSRIESRRMKQIIDAAMLSSSLTRIGSGGENGRVMAHDFP
KPTQTLPCMGQAAAMGLSTTGM
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaaagtttggccttactctttaccggtttgcttgggttggtttcaggctcaagt
ttcccaagtaatatcaacataggaggtttgtttccaaccgactcccacgaatatgatgtg
ttccgatttgcgctctctcaacacaacgatgtccccaaactggtaccacaagtggacatg
gtcgacacagggagcagctttgccatgacatacgccttttgttcccagttctccaaagga
gtctacgctatcattggcctgtatgacaggaggaccatgaatatgctcatgtcgttctgt
ggcgctttgcacgtgtgcttcgtaacgcccagcttccccatcgaaaccaacaaccagttt
gtcatccagctcagacctgagctccaggatgctctcattgcccttgtcgagcactacaga
tggaccaagtttgtctacatgtacagctcggattcaggtctgacagttctgcaaaagatc
ttggacactgctgcagagaagacatggcaagtgacatccataaactttgacactctgaca
gaggctgcattcttgaaagtcatccaagatctggataataagaaagagtacaagatcatt
ctggactgtgagctggagagactcaattccatcctaaacttgatagcagtgcaaaagaag
aacttgaagaattaccactacatactagcaaacctgggatttatggatcttaatctcaca
gaattcagaaagggaggtgccaatttgactggctttcagctcatgaactacacagatcct
gctgtcagcagaatgatacaagactggctggagtttgacagtaaagacttgaaaagtccc
aaaaggagactgaagtacactggagctcttacctatgacggggtgaccgtcatggccact
gcgttccagaacctgagaaagcaacgcatcgatgtctctcgcagggggaatgcgggggaa
tgtttggcaaatcctcccgcaccctggggtcagggcattgacattcagagagccttacag
caggtgaagtttgaaggactaactggaaacgttcagtttaatgacaaagggcatcggaca
aacttcactgtcagtgtgatggagtttagcccaacgggacccaagaaagtgggctattgg
aatgaacatgagaaatatgtgagcacagcaacttacaccaacatgctcaacgagacgtat
ggactgcaaaacaggacttatatagtcaccaccattcttgaatctccatatgtgatgctg
aagaagaatcatgaacagctaattgggaacgacaagtatgaaggttactgtgtggagctg
gcagcagagatcgccaaacatgtgggctattcctacaggctagagctcgtaggggatgga
aagtacggagcgagagactcggagacgaagatgtggaatggaatggttggagaactagtg
tatggtaaagcagatgtggctgttgcacccctcaccattactttggtcagagaggaggtc
atcgacttctccaagcccttcatgagtcttggcatatccatcatgatcaaaaagcccacc
aagtccaaaccaggtgtcttctcttttctggatccactggcctatgagatctggatgtgc
atcgtatttgcgtatatcggtgtgagtgtggtactattccttgtgagccgcttcagtcca
tatgagtggcatacagatgatgaagacgacggcacggaacagcaaaaccagaatcaaaac
caaccaccgtcaccagaagccaaccagtcaccgaatcaacacggtcagaatcagaatcag
cgagatgacaagcaagaaaaacaaccggagcacaataatgagtttgggatcttcaacagc
ctgtggttttctctgggagcctttatgcagcaaggatgcgatatatcaccaagatctctc
tcgggtcgcatagttggaggtgtctggtggttctttactctgattatcatctcctcatac
acagccaacctagctgcctttcttacagtggagaggatggtgtcacccattgaaagcgca
gaagatctggcgaaacaaacagagattgcctatgggactttggatggaggatccaccaaa
gagttcttcaggaggtccaagattgcagtgtttgagaagatgtggtcctacatgaaggca
gcagagccttctgtattcgtgaagacaacagatgaaggagtcgtgcgggtgagaaagtcc
aaagggaagtatgcttatctgctggagtccactatgaacgaatacatagagcaacgcaag
ccatgtgacacaatgaaggtgggagggaatctggactctaagggctatggagtagctaca
cccaaaggatccgccctgagaaacccagtaaacctggcagtgttaaaactgaacgagcag
ggcctcttggacaaattgaaaaacaaatggtggtacgacaagggagagtgtggcagcgga
ggaggggattccaaggataagaccagtgcattaagcctcagtaatgtggctggagttttc
tacattctgattggtggactcggactggccatgctggtggcactagttgagttctgttac
aaatccagaattgagtcacgaaggatgaagcaaatcattgacgcagccatgctcagttcc
agtctgaccaggattgggagcggaggtgagaacggtcgtgtgatggcacacgattttccc
aaaccgacacagactctgccgtgtatgggccaggctgctgccatgggccttagcaccact
gggatgtaa
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