KEGG   Paramisgurnus dabryanus (large-scale loach): 135776379
Entry
135776379         CDS       T10799                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135776379 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdab03041]
    135776379 (sf3b4)
Spliceosome [BR:pdab03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    135776379 (sf3b4)
 Complex B
    135776379 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    135776379 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 135776379
NCBI-ProteinID: XP_065143113
LinkDB
Position
19:7251303..7255744
AA seq 394 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEDDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINYASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPVSLPNPVMTTLGVPMPGMPPPGA
FPPVPPPGSMPPGIPPGMHMPPAPGTGGPHGGGTGPPPGPPPFHHGGMHPPGMPPMPMPP
SGPPGMVHPPGSNQPRAPPPPGMPPPPMGVPPRGPFGPPMGMHPGMRGPPPPMPPPGYGA
GPPRPPPLGFQRGPPLPPRPPAPPRGPMRAPMPP
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggcggcgggaccgatttctgaacgaaatcaagatgcgactgtatatgtgggtggtctt
gatgagaaggtctctgaacctcttttgtgggagctttttctacaagctggtcctgtcgta
aacacacacatgcccaaagatcgagtaacaggacaacatcaaggttatgggtttgtggag
ttcctcagcgaagatgacgcagactacgccataaagattatgaacatgatcaaactttac
ggcaaacccatacgagtcaacaaagcgtcggcgcacaacaagaacctcgatgtcggcgcc
aacatcttcatcggcaacttggaccctgagattgacgagaaactcctctacgatactttc
agcgcttttggcgtcatccttcagacgcccaagatcatgcgtgacccggatacaggcaac
tctaagggatacgctttcatcaactatgccagctttgacgcctccgatgcagctatcgag
gccatgaacggccagtatctctgcaataggcccattacggtgtcgtatgcgtttaaaaag
gactcgaagggcgagaggcacggctcggccgcagagagactcctggccgctcagaatcca
ctttcacaggccgatcgtccccatcagcttttcgcagatgccccaccgcctgtctcttta
cccaaccctgtcatgaccacgcttggtgtaccaatgccaggaatgcctccacctggtgcg
ttcccacctgttcctcctccaggctcaatgccacctgggatacctcctggcatgcacatg
ccgcctgctccagggaccggtggaccacatggcggtggcacagggccgccaccggggcca
ccaccattccaccatggaggaatgcacccacctggaatgccaccgatgccaatgccccca
tcgggacctcctggtatggtgcatccacccggatccaatcaaccaagagcaccacctcca
cctggaatgcctcctccacccatgggtgtccctccaagaggaccattcggtcccccaatg
ggtatgcatccaggtatgaggggaccacccccaccaatgcctccacctggttacggtgct
ggcccgcccagacctccacccctcggctttcagagaggacctcccttaccaccacgtcca
cctgcaccaccacggggtccgatgagagcacctatgcctccctaa

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