Paramisgurnus dabryanus (large-scale loach): 135776638
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Entry
135776638 CDS
T10799
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135776638 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135776638 (nup98)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135776638 (nup98)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135776638 (nup98)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135776638 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
135776638
NCBI-ProteinID:
XP_065143549
LinkDB
All DBs
Position
18:complement(25732547..25753501)
Genome browser
AA seq
1810 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTSSTFGQQNTGFGATGGFGSTAFGTTTNNTGGLFGATQNKPG
GLFGSSTFSQPVTSSTSSGFGFGPTTGTSNSLFGSTNTGTGGLFSQPNNAFSANKPAAFG
TFGTSTSSGGLFGTTNTTSNPFGGASGSLFGASSFTAAPPGTTIKFNPPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNPMAAGTGGLFGAAAPATPSTG
TGLFGSSAPNAGFSFGQKQTSFGTSTGNFGTTTGGLFGQTQPQQPSSLFKPFGAATTTPQ
NTGFSFGNTNTMGQPNTASSMGLFGNTAASQAGGLFGNTNTSTAAGFGTATGLFGQPNTG
FGNVGTQNLFGSKPAGFGTTTTSAPSFGTGSGLFGNKPTLTLGTNTNTSTFGFGGTATGG
SLFGNKTATTGLGTGLGTGFGGGIYPSAGQTSLFGNNQNKLGSTLGSVGTFGTGTFNTGA
STLNFGAPQQPVALTDPSAAAAQQAVLQQQINALAYSPFGDSPLFRNPLSDPKKKEERLK
PTNPAAQKALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDEPSLTNGAFMPR
KSIKKLVLKNLNNSSLYNNSVNREADDLASPSEYPQNGLSLSVDEREMAAERSVDDDLEV
SKFYTNPITKPIPHAQPSPLLQDTISEFNIRGASNNRNGLEASSEEISLAEDSIQEERDE
ELEAQKPPHPAGIVLSRAGYYTIPSMDELGKLLNENGECIVQNFSIGRKGYGSVFFPGEV
NLTNMNLDEIVFLRRKEVNVYPDDKEKPPIGEGLNRRAEVTLDGVWPNDKTTCCQIKSPE
RLVEMNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQESDEEEEVPPSKVDL
KKLKTGIPPGIQQLQLKQQQVPPQAQSTAVLELLSHVSEFDSDMADITQEPATDSILGEE
DGERTSLEEMKLRSETPAEHEPISASSQMASAMGINPHTLQIMKASLFAEDDECDLFQEH
GSSKFIQDVASPKLLLSGGGRPSLGSLLQTKFTSGGGLFSHLPEAPFGVISQKLNKSLAS
EAPWPTFGPSFHLPAPAPEPTLRTVGARRLGGPVPMESSVTLGKGHLLMDAALFRGRSFR
VGWGPNWTLVHSGDQLSLTEAMKEQATEIMGFGFLPKPTKTKPITESPFKVRVEQVVGLE
PKESEEGLAVYHRPLDIELKHSTIRTEDPCPFIQPVSGVDALHEYAEWIVEVNKDIGAGD
AVLAHWRQVWTLCAALWGRLGDQETMQDSDYQQQLERRRSFSHWLSESAAERIEEEVGLA
LQQSHAEAIFSYLTGHCISKACKLAQKSGDHRLSLMLSQAVGSQDCRDLLALQLSDWNRM
ETDSFIEEERLKIFALLAGKPVWQSTDCCINVCSELDWKRCVAVHLWYMLPPTASVADAL
AKYESAFQDSDEGKKYACLPLPPYVDEMELLDMDEEMEGTKSKRSLYDICFHLLKLYSDR
HYSLEQLLEPTTITSDRLDYRLSWHLWNVLQALNYNHLSTSCQGLMHASYAAQLESAGLW
DMAIFVLLHIPDSGCREKAVREMLNLHCSLMETEESMEKEQFLTEKLQIPIQWIHQAKAI
RACREGDKHREALHLYKAGHWNQCHQLVIQHLASDCIINDNHNYLLEFLEGLAVPERSVH
IQGWETSGRVYLDYIRVNQLLKNIQQTESPGYELERLHTEVTSLCGRIELIPCYKAKDRL
AQSDMAKRLANILRVVLSFQQGGEGTLDPRHIPLCQLAPHIGRLPMPEDYALEELRSLTQ
SYLQEYVVSH
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatcttttggtgcgccctttgggggcgggacgggaggatttgggacttcg
tcaacatttggccaacaaaatactgggtttggagcgacagggggttttggttcaacagca
tttggtacaacaacaaacaacacaggaggactttttggagccacgcagaacaagcctggt
ggcctgtttggctcaagcactttcagtcagcctgtcacatcatctaccagcagtggattt
gggtttggtcccaccactggcacatccaacagtctttttggaagcaccaacactggaact
ggagggctgttttcccagccgaataatgctttcagtgccaacaaaccagctgcttttggc
acttttggtaccagcaccagtagtgggggattgttcgggacaactaacacaacgtctaac
ccttttggaggagcgtcaggctctttgtttggggcttcaagtttcaccgctgcaccacct
ggcacaacaatcaaattcaacccaccgactggaagtgatacaatggtgaaggcaggtgtg
acgaccagtatcaacaccaaacatcagtgcatcactgccatgaaggaatacgagaacaaa
tccttggaggaattgaggcttgaggattaccaggcaggcagaaaggggccgtccaaccct
atggcagcaggcacaggtggtctgtttggtgctgcagccccagctacacccagcactggc
actggtctctttggctcctcggctccaaatgctggcttcagctttggccagaaacaaact
tcatttggcaccagtacaggaaactttggcacaaccacgggaggtttgtttggccagacg
cagccgcaacagccttccagtctcttcaaaccattcggcgcagccaccaccaccccccaa
aacactgggttctcttttggcaacaccaacaccatgggtcagcctaacactgctagcagc
atgggtctgtttggcaatactgctgcctcacaggctggaggtctgtttggaaacactaac
acaagtactgccgcaggctttggcacagccacaggactctttggtcaaccaaacaccgga
tttgggaatgttggtacacagaatcttttcggtagtaaaccagctggatttgggaccacc
accaccagtgcaccctcctttggcacaggctctggtctttttggaaataagccaacactc
acacttgggactaacacaaacacatcaacctttggatttggtggaactgctactggtggg
agtctttttggtaataaaactgctacaacaggcctgggaactggattgggaactggcttt
ggaggaggtatatatccttcagccgggcagacgtcattgtttggaaataatcagaacaag
ctgggctccaccctggggtcagtgggtacattcggaaccggaaccttcaacactggagca
agcacattgaattttggtgctccccaacagccagtggctctgactgaccccagtgcagca
gcggctcagcaggctgtccttcagcagcagatcaacgcgttggcctactcgccttttgga
gactcacccctcttcagaaacccactgtctgaccccaaaaagaaggaagagcgcctgaag
cccacaaatccagctgcccaaaaagccctgacaacccctactcagtacaaactgacccct
cgtccggccacacgcgtgcgtcccaaagctctgtcctcatcgggctcctccaaatcacag
ctctttgatggacttgatgatgatgaaccctctctcaccaatggagcctttatgcctcgg
aaaagcataaagaagcttgtgttgaagaatctgaataacagcagcctgtataacaattcg
gtgaacagagaggctgatgacctggcatccccttcagagtacccacagaatggactaagt
ctaagtgtggatgaaagggaaatggcagcagagagaagtgtggacgatgatctggaggtc
tccaagttttacaccaaccccatcaccaaacctattccccacgcccagccaagtccctta
ctgcaagacaccatcagcgagttcaacatacgtggggcttctaataatcgcaatggcctg
gaggccagcagtgaagagatctcgctggcagaggattccattcaggaggagagagatgag
gagctggaggctcagaaacctcctcatccagctggcatagttcttagccgtgcgggctac
tatacaatcccatccatggacgagttgggaaagctgttgaatgaaaatggagaatgtatt
gtgcagaacttttctatcggcaggaaaggctacggatcagttttctttcctggtgaggta
aaccttaccaacatgaacctggatgagatcgtgtttttgaggcgtaaggaggtaaacgtg
taccctgatgacaaagaaaaacctcctattggagagggcctcaacagacgagcagaggtg
actcttgatggtgtatggccaaacgataagacaacttgttgtcagatcaagagcccagaa
agactggttgaaatgaactacgagggcagactggaggccgcatcacgcaaacagggcgct
cgcttcttggagtaccgtcccgaaactggttcctgggtgtttgaggtggctcacttctca
aagtatggcctacaggaatctgatgaagaggaagaagttcccccatccaaggttgacctg
aagaagctgaagacgggaattcctcctgggatccagcaacttcaactgaagcagcagcag
gtgccaccacaggctcagagtacagcagttcttgagctcctcagccacgtgtcggagttt
gacagcgatatggccgacattactcaagaacctgccacggacagtattttgggtgaggag
gatggagagagaacttcactagaggagatgaagctgagatctgagacacctgctgagcac
gagcctatttctgcctccagccaaatggcttctgcgatgggcatcaaccctcatacttta
cagattatgaaggcctctctgtttgccgaggatgatgagtgtgacttgtttcaagaacat
ggttcctcaaagttcatacaggacgtggcctcccccaaactcttgctttctggaggtggt
cgaccatcacttggaagtctattacagaccaagtttacttcaggaggagggcttttttca
cacttgccagaggctccatttggtgtaatatcccagaagcttaacaaatcacttgcttca
gaggccccctggccaacatttgggccttcctttcacttgccggctccggccccagagccg
actttacgtactgtaggggcccgcagattaggagggcctgtccctatggagagctctgtc
actctagggaaaggacatctgctgatggatgctgctttgttcagagggcggtcttttaga
gtgggctggggacccaactggacactggtgcacagtggagatcaacttagtcttacagaa
gcaatgaaggaacaggcaacagaaatcatgggatttgggttcttgcccaagccaaccaag
accaaaccaatcactgaaagtccatttaaagtgcgtgtggaacaggtggtaggtcttgaa
cccaaggagtcagaagagggtttggctgtgtaccacaggccactggatattgaactgaag
catagcacaatccgaactgaagacccttgtccctttatccaacctgtgagcggagtggat
gctcttcacgagtatgcggagtggattgtggaggtcaacaaagatatcggagcaggcgat
gcggtcttagcccattggcgacaagtttggactttgtgtgctgctctgtggggtcgtctg
ggtgatcaggagaccatgcaggattcggactaccagcagcagcttgagcgacggaggagc
ttctcacactggttgtccgagagcgcggccgagcgcattgaggaggaagtgggcctggcc
ttgcaacagagccatgctgaggccatatttagttacctaaccggtcactgcataagcaag
gcctgcaaactagctcagaagagtggggaccatcgcctttctctgatgctgtctcaggct
gtgggctctcaggattgtagagatcttttggccctgcagctcagtgactggaaccggatg
gagaccgactccttcatagaagaggagaggctgaaaatctttgctttgcttgcaggcaaa
ccagtgtggcagtcaacagactgctgtataaacgtgtgctctgagctcgattggaagcgt
tgtgttgctgttcatctttggtacatgctgcctcccactgcatctgtagccgatgctctc
gccaaatatgaatctgcctttcaggattcagatgaagggaaaaagtatgcttgccttcct
ttacctccatatgtagatgaaatggagttattggatatggatgaagagatggaggggaca
aaatctaaaaggtccctctatgacatctgctttcacctgcttaagctttacagtgacagg
cactacagcctagaacagctgcttgaacccaccacaataacttctgatcgtctggactat
cggctgagctggcacctatggaatgtgttgcaggcactgaactacaaccatctgtccacc
tcatgccagggcttgatgcatgccagctatgctgcccaactggagagtgcaggactctgg
gatatggccatctttgtgctgctacacatacctgactctggatgtagagaaaaggcagtg
cgagagatgctgaacttgcattgctccctgatggagacagaagagtctatggagaaggag
cagtttctcacagaaaagctgcaaatacccattcagtggattcatcaggccaaagctatc
cgtgcctgcagagagggagacaaacaccgtgaagccttgcacctatacaaggccggacac
tggaatcaatgccatcagctggtcatccagcacctggcctcagattgcatcattaatgac
aatcataactaccttctggagtttctggaaggattggcggtgccagagcgcagtgttcat
attcagggctgggaaacatctggacgggtctaccttgattacatccgtgtcaaccagttg
ttaaagaacattcaacagaccgaaagccctggatatgagctggagcgattacatacagag
gtgacatctctgtgtggcaggatagagctcatcccttgctacaaggctaaagaccgactt
gcccaatcagatatggccaaacgtctggctaacatcctccgggtggttttaagtttccag
cagggtggtgaaggcaccctagatccccgtcatattcctctttgtcagctggccccgcac
attggacgtctacccatgccagaggactacgcattagaggaacttcgcagccttactcaa
tcttacctgcaggagtacgttgtcagtcactga
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