Paramisgurnus dabryanus (large-scale loach): 135776660
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Entry
135776660 CDS
T10799
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135776660 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135776660 (rbm22)
Spliceosome [BR:
pdab03041
]
Complex B
Other components
Prp19-related factors
135776660 (rbm22)
Complex C
135776660 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_YTH1
RRM_3
zf-CCCH_4
zf-CCCH_10
zf-CCCH_12
Calcipressin
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
135776660
NCBI-ProteinID:
XP_065143578
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All DBs
Position
18:26111004..26116928
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AA seq
424 aa
AA seq
DB search
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGLLGKAPGHSDMLLKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVANKLLQRGTTMPRLDPPEDKSITTLYIGALG
EDVTDSELRNHFYQFGEIRTITVVQRQQCAFIQFATRQSAEAAAEKSFNKLIINGRRLNV
KWGRSQAARGTTKDGVESGIMLEPVPGLPGALPPPPVSDVDAPANYFNLGPTSSPAVMNF
QALPPPPGVAMPPPPGFGPPMFHAMDPMGPPMPPPMVMRPPGQVHYPSQDPQRMGAHASR
HGGP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctttaggctccaatacttacaataggcaaaattgggaagattcagatttt
cccatcctttgtcaaacatgcttgggtgaaaacccttatatccgcatgacaaaagagaaa
tttggcaaagagtgtaagatctgtgcacgacccttcactgtgtttcgctggtgtcctggg
acccggatgcgctttaagaagacagaagtgtgtcagacgtgcagtaaaatgaaaaatgtg
tgtcagacgtgcctcctggatctagaatatggtttgcccattcaggttcgagacacgggg
ctgtccgttaaagatgaagtaccgagatcagatgtgaataaggagtattacactcagaat
atggagagagagattgctaactctgatggcaccagacctgtgggtttgcttggaaaagca
ccaggtcacagtgatatgttgcttaaactggctcgcacctcaccatactacaagaggaac
agaccacacatatgttcattctgggtgaagggagagtgtaagagaggagaggagtgtcca
tacaggcacgagaagcccactgatcctgacgatccgctggccgatcagaacattaaggac
cgttattatggcatcaatgatcctgtagctaataaactccttcaacggggcaccacaatg
cctagactggacccacctgaggacaagtccatcaccacactatatatcggagcattggga
gaggacgtgacagactcagaactcaggaatcacttttaccagtttggggagattcgtacc
atcactgttgttcaaaggcagcaatgcgccttcatccagttcgccacacggcagtcagct
gaggcagcggcagagaaatccttcaacaaactcatcatcaacggccggcgccttaatgtt
aaatggggcaggtctcaggcggctcgagggactaccaaggatggggtagagagtggaatc
atgctggagccagtgcctggtctccctggagctctgcctccaccccctgtgtctgatgtg
gacgccccggccaattacttcaaccttggacccaccagttctcctgctgtcatgaacttc
caggcccttcctcctccacctggggttgccatgcctccaccacctggttttggtcctccc
atgttccatgccatggaccccatgggcccaccaatgccccctccgatggttatgaggcca
cccggacaggtccactacccatcccaagatcctcagcggatgggcgcccatgcaagtcgc
catggaggcccttag
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