Paramisgurnus dabryanus (large-scale loach): 135776760
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Entry
135776760 CDS
T10799
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135776760 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135776760 (ddx46)
Enzymes [BR:
pdab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135776760 (ddx46)
Spliceosome [BR:
pdab03041
]
Complex A
U2 snRNP components
U2 related factors
135776760 (ddx46)
Complex B
135776760 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
RSRP
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
135776760
NCBI-ProteinID:
XP_065143737
LinkDB
All DBs
Position
18:32291859..32311610
Genome browser
AA seq
1041 aa
AA seq
DB search
MGRESRHYRKRSGSRGRSGSRSKSRSPDSKRSKKDDRAGSRNRERSRRERSRSRDRRRSR
SRDRKRPRRSRSRDRRRSRSRDRRRSKSRSRGRSKEKVENGDQSTDKKKIKEEKEEEKVE
DQEFDQNTLEEEMRKRKERVEKWREEQRKKAMENIGELKKELEEMKQGKKWSLEDDDDDD
EEPLAPVDQEEEEEEEGDEEKDKVTETETSTRMEEETGEELDPLDAYMEEVKEEVKKFNM
GTMKGGNDKKGGMTVTKVVTVVKTKKMPHTSKKKGELMENDQDAMEYSSEEEEVDLQTAL
TGFQTKQRKVLEPVDHKKIEYESFRKNFYVEVPELVRMSLEEVSEYRLELEGITVKGKGC
PKPIKAWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFL
LPMFRHILDQRPLGEGEGPICVIMTPTRELALQITKECKKFSKPLGLRVVCVYGGTGISE
QIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVMDEADRMFDMGFEPQVMRII
DNVRPDRQTVMFSATFPRTMEALARRTLSKPIEVLVGGRSVVCSDVEQHVIVIEEEKKFL
KLLEILGHYQEKGAVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKN
GVCRLLVATSVAARGLDVKHLILVINYNCPNHYEDYVHRAGRTGRAGNKGYAYTFITIDQ
ARYSGDIIKALELSGSPVPAELELLWTSFKEQQKAEGKSIKSSSGFSGKGFKFDETEHAL
ANERKKLQKAALGLHDSDDEDTALDIDEQIESMFNSKKRVKDFSAPGGAAGAPAVGVTVT
SVSGQSSVAAPSAGNIQKLEMAKKLAQRIQVQKNLGAEAQDVMQQATNAILRGGTMIAPS
VSAKTIAEQQAEKINAKLNYTPVEKLDEERQAAEAADTVKRYEEELEINDFPQTARWKVT
SKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIK
EELIRLQNSYQPTSKGRYKVL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgggacgagagtctcgccattacaggaagcgatcaggttcgagggggaggtccggcagc
agatctaagagcagatcgccagactcaaagcgctccaagaaagatgatcgggctgggtca
cggaaccgtgagcgaagcagaagagagagatcacgcagccgagaccgccgaagatcacga
tccagagacagaaagagacctaggcgctcaaggagtagggacaggaggcgctcaaggagt
cgagaccgcaggaggagcaagagcaggagcaggggaaggagcaaggagaaggtggaaaat
ggagaccagtctacagataagaagaaaattaaggaggaaaaagaagaggagaaggttgaa
gatcaagaatttgaccagaacactttggaggaagagatgaggaagagaaaagagcgtgtg
gagaaatggagggaggaacagaggaagaaagccatggagaacattggagaactcaaaaaa
gagctggaggagatgaagcaggggaagaaatggagtctggaggatgatgatgatgatgat
gaggagcctttagccccagtggatcaggaagaggaagaggaggaggagggagatgaagaa
aaggacaaagtcacagaaacagagacctccacacgtatggaggaggaaactggagaggag
ctggaccctctggatgcctacatggaggaggtgaaggaggaagtcaagaagttcaacatg
ggcaccatgaaaggaggaaatgacaagaaaggaggtatgactgtgacgaaagtggtgact
gttgtgaaaacaaagaagatgccccacactagcaagaagaaaggagagcttatggagaat
gatcaggatgccatggagtattcatcagaggaagaggaggtggatctgcagacggccctc
acaggctttcagaccaaacaaagaaaagtcctggagcctgttgatcataagaagattgaa
tacgagtccttccgcaagaacttctacgtggaagtgccggagctggtcaggatgtcactt
gaggaggtgagtgaataccgcctggagctggagggcatcacagtcaaaggcaaaggatgt
ccaaagcccatcaaagcctgggttcagtgtgggatatccatgaaggttctgaatgcacta
aagaaacacaattatgaaaaaccaaccccaatccaagcccaggccataccggccatcatg
tcagggcgcgacctcatcggcatcgctaagacaggaagtggaaagactatcgcctttctc
ctacccatgtttcgccacatattggaccagagacctttaggggagggtgaaggtcccatc
tgtgtgataatgacccctacacgagaactggctctgcagatcactaaagagtgcaagaag
ttttccaaacccttgggcttgagggtggtctgtgtttatgggggcactggcatcagcgag
cagattgctgagttgaagcgaggtgcagaaatcatagtgtgcacaccaggaagaatgatt
gacatgttaggtgccaacagcggtcgagtcactaatctacgaagagtcacatatgtggtg
atggacgaagcagaccgcatgtttgatatgggctttgaaccacaggtgatgcgcatcata
gacaatgttaggccagaccgtcagactgtgatgttctctgccacgttcccacgaactatg
gaggccttggcccgaaggaccctgtccaaacccatcgaggtgcttgtcgggggcaggagt
gttgtgtgttcagatgtggagcaacatgtgattgtaatcgaggaggagaagaagttccta
aagctgttggagattctgggtcactatcaggagaagggcgctgtcatcatctttgtggat
aaacaggaacatgctgatgggctcctcaaagacctgatgaaagcatcttacccttgcatg
tcattacacggaggcattgatcagtacgacagggacagcatcatcaatgactttaagaat
ggagtgtgccggctacttgtggccacatcagtggccgcacgaggcctggatgtgaagcac
cttattctggtgatcaattacaactgtcccaaccactatgaggactacgttcaccgcgcc
gggcgcacaggccgagcgggcaacaaaggatatgcatacaccttcatcactatagatcag
gcccgatattccggtgacatcatcaaggccctggagctgtctggatctcctgttcctgca
gaactcgagctgctgtggacgagctttaaagaacaacagaaggctgagggcaaaagtatc
aagagcagcagcggtttctctgggaaaggttttaagtttgatgagactgaacatgcactg
gccaatgaaaggaagaagctgcagaaggctgcattaggcctgcacgactcagatgatgaa
gacaccgccctggatattgatgagcagatcgaaagcatgtttaactcaaagaagcgggtg
aaggatttctcggctccaggcggggcagcgggagcgcctgctgtcggagtaactgtcact
tccgtgtcaggccagagtagtgtggcagccccatctgctggaaacatccagaaactagaa
atggccaaaaaactcgctcaaaggatacaagtgcagaagaatcttggtgctgaagcccag
gacgtgatgcagcaggcgacgaacgccatcctgagaggcggtacgatgatcgctccctct
gtctcggccaagaccatcgcagaacagcaggcagagaagatcaacgccaaactcaactac
acacctgtagagaaacttgacgaggagagacaagcagccgaggcagcagacactgtgaag
cgatacgaggaggagttagaaatcaatgactttccacagacggctagatggaaagtcacg
tctaaagaggcccttcaacgcatcggcgagtattcggaggcggccatcactataagggga
acatacttcccaccaggaaaggaacccaaagagggagaacgcaaaatctacctggctatt
gagagtgctaatgagctggctgtccagaaggcaaaagcagaaatcacacgtctcatcaaa
gaggaactcatccgcttacaaaactcataccaaccaaccagcaagggccgatacaaggtt
ttgtag
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integrated database retrieval system
