Paramisgurnus dabryanus (large-scale loach): 135776893
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Entry
135776893 CDS
T10799
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135776893 (rnf115b)
04121 Ubiquitin system [BR:
pdab04121
]
135776893 (rnf115b)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135776893 (rnf115b)
Membrane trafficking [BR:
pdab04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
135776893 (rnf115b)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135776893 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Zn_ribbon_20
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
135776893
NCBI-ProteinID:
XP_065143885
LinkDB
All DBs
Position
19:8682105..8693435
Genome browser
AA seq
306 aa
AA seq
DB search
MAEAAARHRFFCHCCKGEIDPKLPEFVCPRCESDFIEEVSENSSLLQSTDGTDAADVDSD
EMNSQFAELCQLLFMEHSALLSDPTVTDALHSRSGVEATVGDPAPGTLGPVASVETLRDC
TEPTQLPQENSQQRNSRLDQEQAVEGMVQQFLAGLFTNAESTDSQTSSWSSMLHSNPGDY
AWGQGGLDVVITQLLGQSECSGPPPAEKEMISSLPTISISTEQAACRLECPVCREAYSAG
ESVLQLPCLHCYHTNCIVPWLQLHDTCPVCRKSLDGEDRGFQPTSAPPGPVPSSPNTEEQ
STFETL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgccgcgcgacaccgcttcttctgtcactgctgtaaaggtgaaatcgat
ccaaaactgccggagtttgtatgtccaagatgtgaatctgacttcattgaagaggtgtca
gagaattccagtcttttacaaagcactgatggcacggatgcagcagatgtagacagtgat
gaaatgaactcacagtttgcagagctgtgccagctgttgttcatggaacattcagccctc
ctttctgaccccacggtcacagatgccctccacagccgctctggggtcgaggctacagtt
ggtgatcctgctcctgggacactgggacctgtagcctccgtggagactttaagagactgc
actgagccgacacaactcccgcaagaaaacagccaacagagaaactctagactggatcag
gaacaggctgtagaggggatggtccagcaattcctggctggtctttttaccaatgctgaa
agcacagattcccaaacatcttcatggtcgagcatgttacactctaaccctggagattat
gcttggggacaaggtggtctagatgtggtcattacacagttgctcggccagtctgaatgt
agcggtccccctcctgctgagaaagagatgatctcatctcttcccaccattagcatctcc
acagaacaggctgcatgccgattggaatgccctgtgtgtagagaggcatattctgcaggg
gaatctgtcctgcagctgccctgtctgcactgctatcacaccaactgcattgtgccttgg
ctacaactgcatgacacctgtcctgtctgtcgcaaaagtctggatggtgaagaccgcggt
ttccagcccacatctgcacctccaggtccagttccctcatcaccgaacacagaggaacaa
agcacctttgaaactctttag
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