Paramisgurnus dabryanus (large-scale loach): 135778121
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Entry
135778121 CDS
T10799
Symbol
atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04136
Autophagy - other
pdab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135778121 (atg2b)
04136 Autophagy - other
135778121 (atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135778121 (atg2b)
03029 Mitochondrial biogenesis [BR:
pdab03029
]
135778121 (atg2b)
Membrane trafficking [BR:
pdab04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
135778121 (atg2b)
Mitochondrial biogenesis [BR:
pdab03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
135778121 (atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
DUF7054
Motif
Other DBs
NCBI-GeneID:
135778121
NCBI-ProteinID:
XP_065144627
LinkDB
All DBs
Position
17:23965551..23996551
Genome browser
AA seq
2079 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLDQLSLDLYQGTGSLAQVPLDKWSLNEIL
ESVDAPFEVSEGFIKTITLTVPWASLLQDNCALEVRGLEMVLRPRPRMTSGMEPMYWSSF
MASSMQLAKECLSQRLTDDQGESFQPLDGLEKFAETIDTVLRRVKITFVDTVLRMEHIPE
NSKTGIALELRINKMIYCDESMEDSSVNIHQPTTFAHKNLTLDGASVFWDEFSESARAGL
KSPPPQTETEPKLSPSWNPRIICEPHPQFPEPVSSSMAFEPVQVGCLSGRLELSVVLKQN
EAIPGAKLDIDGQFESLIMLLSPRQVHLLLDMFGVFSGSAGQEWSALGKDRKNRPMQQED
EYRLQMELNRCLKKETISGVIDQDLFESQTTRTVSSREDVFFSMADMDMSHSLSSLPPLG
DPPTVDLDLSLNSNYSASLGESPTGNVSTVWDECIDVSKQKEKRTNEMPQLSRDPQFPQR
LLRQTSHPSKGHCDESRPELVLRLSLGNVCLSVLHIDPLPPPDSSVNPLAPMASEFFRIL
SLNQLTVGGFIQSRTVFDQACPHDHLRFIGQKLKVTYEHCQSSSIRTLNTDLSLSQLELL
ECLYSADSRTTQSGAQYTELLTFDVPTSSSESPHPTCLHLLYKLTERRGPQGGQVRLSAI
PRKAELQVELGKVRSECDVSIVDRLNSLLQPQKLVTTEMMASHMYTSYNKHVSLHKAFAE
VFLDDSRNPAHCHVSVTINAPLLVLVVRFPIPDLRSDQERGPWFKKSLQKELLCLELEDV
ELKTEFTGGNSSEQTKMELMFKELSGSFQKDKDHPAARFLRVANTMEEDMTSSDSGKFDW
PRVVLKVNPKAVHSILERVTTEEEEEGVDGHSQEEEEEEEGASHSLKDVCDFGKTEPSPF
SSRRVMYENEEMVIPGDVLEMTEFQEKTMSNSRYILELFLPNVQLALPNKAFYEKLHNRI
NNDLLLWEPTAPSPVETVENIPYGVGLSVASQLINTYNKDSFSQFRSTCPEEEDSGSEEE
ALQYYTPAELGYRSRRKKRSKIQPKNSQSLFSIVLSVNHGLLSLHTQIKQEDNSVLPNKH
GEFWLEVKNGTLFGVTQHEGYKDQHYICFHTSQACLYHHGSVDGDAPDWSVTLPCRTRPH
WLEPVMYASESAPERASPSEGLSLEPHSMLSVAVKISSHNTERNVKEFLIAVGMRGVTLQ
HRVVPSSLGWYDQIVDFLNVSDEPVLGYNPQTSASTLHLHLWSCSLDYRPLYLPMRSLLT
VETFSISSSVSLDHSSSNLRIILDEAALFLSDKINAVSVNLARDYVQVVDMGTLELRITA
VKPGTDGKMMEPRFELRCSSDVIHIRTCSDSCAALMNLIQYIASYGDLLPPSGLETKSRS
AKQRVKTEAGSRPPPQTPLLPEADQQILQDLMSDAMEETDGLQSHAPQQNGVNENHSHDQ
DPPRSDLFLFPDESGNLGQEPSPIYPTLHSPLISPPVPSLQHDSDDFCILDTPSSKLMER
DEEPVVKKLTSEPILLKENYFNAPIEGSSNRGPLHFPIPEVRYLVKEISVVWHLYGGKDF
GGGALSSSPARSRGCTPHSSPSQTPLRQARRSSRAGGGWSRNADVLMEIQLSKVRFQHEV
YSQMAPEAGVSAEQPVSRQVFSVQDLEIRDRLASSMMNKFLYLYSSKEMPRKAHSNMLTV
RALHLCPEVGQAPQECCLRVSLMPLRLNIDQDALFFLKNFFTSLSTEVELFSPPEQEVFY
MSMKKPPGPDVSCSFSKYNGGTSQDPAPIISVPTQARSSPSFISTCSQGGATETDTSASS
SFTDQPIFFREFLFTSEVPIRLDYHGKHMAMEQGTFAGIVIGLTQLNCSELKLRRLCYRQ
GLLGVDKLFSYAINEWLNDIKKNQLPGILGGVGPIHSLVQLVQGFKDLVWLPIEQYRKDG
RIVRGFQRGTASFGTSTAMAALELTNRMVRTIQAAAETAYDMVSPVPDENECKKIKRYSH
YCLAHQPVDLREGVAKAYSVVKEGITDTALTIYDTATREHEQRGMTGAVGGVLRQLPPAV
VKPLIVATEATSNVLGGMRNQIHPDARQEESQKWRLGEE
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgccatggccattttctgaatctattaagaagcgggcatgcaggtacctgctgcaccgc
tatcttggcaatttcctccaagagaagcttagtttggaccagcttagtctggatctctat
caaggcacagggtcgctcgctcaagtgccactcgacaaatggtccctgaatgagatcctg
gagtctgtggatgctccatttgaagtaagtgagggctttattaagaccattacactcacg
gtgccatgggcctcactgcttcaggacaactgtgcgctggaagtgaggggtttagagatg
gtgctcaggccaagacctcgaatgacatccgggatggagccaatgtactggtccagcttc
atggccagcagcatgcagctggccaaagagtgtctaagccaaagactcactgatgatcag
ggagagagcttccaacctctggatggtctggagaagtttgcagagactattgacacagtg
ttgagaagagtcaagatcacttttgtggatactgttctacggatggagcacattcccgag
aactctaaaactggcattgccctcgaactcagaattaataagatgatttactgtgatgag
agtatggaggactccagtgtcaatatccatcagcccaccacatttgcacataaaaatcta
acactggatggggcttctgtgttctgggatgagttttcagaatcggcacgcgctggcctc
aaatcacctcctccacaaacagagactgagcctaagctttcaccgagttggaacccaaga
atcatctgtgagcctcatccccagttcccagaacctgtttcatccagtatggcatttgag
ccggtgcaggtaggctgccttagtggtcgactggagctgtccgtggttctgaagcaaaat
gaagccatcccaggagcaaagttggacatcgatggacagtttgaatcactaatcatgtta
ctatcaccacgtcaagttcaccttttactggacatgtttggtgtcttctccggctcagca
gggcaggagtggtctgctttaggaaaagacaggaagaatcgccctatgcagcaggaggat
gaatatcgccttcaaatggagctcaaccgctgcctgaagaaggaaaccatatcaggagtc
atagaccaggacctgtttgagagtcagactaccagaacagtgtccagcagggaggatgta
tttttctctatggctgatatggacatgtcccacagcctatcatctcttccacctcttgga
gatccacccaccgtggatctggatttgtctctaaatagcaactactccgcttccctgggg
gagtcgcccactggaaatgtatcaactgtgtgggatgagtgcatagatgtttctaaacaa
aaggagaaacggactaatgagatgccacagctttccagagatcctcagttcccccaaagg
ctactccggcagacctctcatccatctaagggccactgtgatgaatccaggcctgagctg
gttctcaggctgtcattggggaacgtctgtctgtcagtcctacatattgaccctctccca
ccaccagattcctctgtcaaccctcttgcaccaatggcctcagagttttttcgtatactg
tctttaaatcaactcactgtagggggttttatccaatcacgaactgtctttgatcaagcc
tgtccacatgatcatctcaggttcataggtcagaaattaaaagtgacttatgagcactgc
caaagctccagcatacgaacactaaacactgatctttccctgagccagctggagcttctg
gagtgcctgtattctgctgatagccgcactacacagagtggagcacaatacacagagctt
cttactttcgacgtcccaaccagtagtagtgaatctccccatcccacttgcctccaccta
ctctacaaactaacagaacgcagaggcccgcagggcgggcaggtacgtctgagtgctata
cctcgtaaggcagagttgcaggttgagctgggtaaagttcgctcggagtgtgatgtcagt
atcgtggacaggctcaactctctgctccagccccagaaactggttaccacagagatgatg
gcatctcacatgtacacatcctacaataaacacgtcagtctgcacaaggcattcgcagaa
gtcttcctggacgatagtcgtaacccagcgcactgtcatgtgtctgtgacgataaacgcc
cccttgctggtgctggtggtgcggtttcccatcccagatctacgttcggatcaggagagg
ggtccctggtttaagaaatccctgcagaaagagcttttgtgtctggagctagaagacgta
gagctcaagaccgagttcactggaggaaactcatcagagcagaccaagatggagctcatg
tttaaagagctcagtgggtcgttccaaaaagacaaagatcaccctgcagccagattctta
cgagtagctaacacaatggaggaggacatgacgtcctctgacagtggcaaatttgactgg
cccagagttgttctgaaggtgaaccccaaggctgtgcactccatcctagagcgtgtaaca
accgaagaagaggaggaaggggtggatggtcattcacaggaggaagaagaagaggaggaa
ggagcctcccactccctaaaggatgtgtgtgattttggcaaaactgagccctcccctttt
tcttcacggcgtgtcatgtatgaaaacgaagagatggtaatcccaggagatgtgttggaa
atgacggaattccaggaaaaaaccatgagcaactctcggtacatcctggagctgtttctt
cccaatgttcagctcgctttgcccaataaagccttttatgagaaattacacaacaggatt
aacaatgacctgctgctatgggagcccacagccccatcaccagtggagacagtggagaac
atcccatatggtgttgggctgtctgtagccagtcaactcatcaacacctacaataaagac
agcttcagtcagttcagatctacctgccctgaggaggaagacagtggttctgaagaagaa
gccctgcagtactacactcctgctgagcttggctacaggagcaggaggaagaagaggagt
aagattcagcccaaaaactcacagagcctcttctccattgtcttgtctgtaaatcacggc
ctactgtctctacacacacagatcaagcaggaggataatagtgtgttgccaaacaaacac
ggagagttttggttagaagtgaaaaatgggactctgtttggcgtgacacagcatgaaggc
tacaaagaccaacattacatctgctttcacacatcgcaggcttgcctttatcaccacggc
tctgtggatggagatgcccctgactggagtgttactctgccctgcaggacacgtcctcat
tggctggagcctgtgatgtacgcatctgaatcggcgcctgaaagggcgtctccttctgag
ggactcagtttggagcctcacagcatgctgtctgttgctgttaaaatctcctcccacaac
actgagcgcaatgtcaaggagtttctcatagccgttggcatgaggggggtcacacttcag
cacagagtggtgccttcaagtctgggatggtacgatcagatagttgactttttaaatgtg
tcggacgagccagtacttggctataacccccaaacttcagcatctacccttcatctacac
ctttggagctgttctctcgattacagacccttatacttacctatgagatctctgttgact
gtggagacttttagcatctccagcagcgtatccttagatcactcttcatctaacctcaga
attattttagacgaggcagcgctgtttctgtctgacaaaatcaatgctgtgtctgtcaat
ttggctcgagattatgtacaggtggttgatatgggcactctggaattgaggatcacagca
gtgaaaccaggaacagatggcaaaatgatggagccaaggtttgagctgcgttgctcaagt
gatgttattcacattcgcacctgttctgactcttgcgccgctcttatgaaccttattcag
tacatagccagttatggggacctactgcccccttctggactggagactaaaagcagaagc
gctaagcagagagtgaagactgaagcaggaagccgcccaccacctcagactcctttgctt
ccggaggcagatcagcagattcttcaggatctgatgagcgatgctatggaggagacagac
ggcctgcagtctcacgcgcctcagcaaaacggtgtcaatgaaaatcactcccatgatcaa
gacccaccccgctcagatctctttctctttcctgacgagagcggaaacctggggcaggag
ccgagcccaatataccccaccctgcattccccactcatctctcctcccgttccctccctg
caacacgattctgatgacttttgcatcctggacacacccagttccaaactaatggaaagg
gacgaggagcctgtggtaaagaagttgacctcagaacccatactattaaaggagaactac
ttcaatgcccctatagagggcagctctaataggggcccacttcacttccccatccctgaa
gtaagatatcttgtcaaggagatctcagtggtgtggcatctctacggaggaaaggatttt
ggaggcggggcgctctcctcttcgccagctcgcagtcgagggtgcactccacacagttct
ccatcacagactcctttaagacaggccagaagaagctcccgtgctggaggagggtggagc
agaaatgctgatgttctcatggagattcagctcagtaaggtgcggttccagcatgaggtg
tattcacagatggcaccagaggcaggtgtttcagcagagcagccggtgtccagacaggtg
ttttctgtgcaagacctggagatacgagataggctggcctcctccatgatgaacaagttc
ctctacctgtactccagtaaggagatgcccaggaaggctcactccaatatgttgaccgtc
agagccctgcatctgtgtccagaggtgggccaagcacctcaggaatgctgcctacgtgta
tctctaatgccccttcgtctgaacatcgaccaggatgctctgttcttcctgaagaacttc
ttcaccagtctttcaacagaagttgaactgttttctccaccagagcaagaagtgttctac
atgtcgatgaagaagccacccggccctgacgtctcgtgtagtttttccaaatacaatggt
gggacgagtcaggaccccgctcccatcatctctgtgccaacgcaagcacgtagcagtcca
agtttcatcagcacctgcagccaaggtggtgctactgagacagacacatctgcttcctca
tctttcacagaccaacctattttcttcagagagttcctattcacgtcagaggtgccgatc
agattagactaccatggaaaacacatggcaatggagcagggcacatttgctggtattgta
attggactgacacaactaaactgctcagaactcaaattacgccgcttgtgttacagacaa
ggattgttgggtgttgacaagctgttttcttatgccattaacgagtggctaaatgacata
aagaagaaccagctgcctgggatccttggaggggtgggacccatacattccctggtgcag
ctagttcagggttttaaggatctagtgtggctgcccattgagcagtaccggaaggatggg
agaatagtacgcggcttccagcgaggcaccgcctctttcggcacctccactgcaatggcg
gcattggaactaaccaatcgcatggttcgaacaatacaggcggctgctgaaacagcttat
gacatggtctctccagttccagatgagaatgaatgtaaaaagattaaacggtactcacat
tactgcctggcacatcaaccagtggacctcagagagggagtagccaaagcatacagtgta
gtgaaagagggcattacagacacagctttgactatttatgacactgctacacgcgagcat
gaacaaaggggcatgacgggcgctgtgggcggagtcctgcgtcagcttcctcccgcagtc
gttaaacctcttatcgtcgccacagaagcaacttccaacgtgctgggaggcatgaggaac
cagattcaccctgacgcgcgacaggaagagtcccagaagtggcgcttgggggaagaatga
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integrated database retrieval system
