Paramisgurnus dabryanus (large-scale loach): 135778141
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Entry
135778141 CDS
T10799
Symbol
jmjd1ca
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135778141 (jmjd1ca)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
135778141 (jmjd1ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
FYVE
zf-UDP
C1_2
Motif
Other DBs
NCBI-GeneID:
135778141
NCBI-ProteinID:
XP_065144663
LinkDB
All DBs
Position
17:23505875..23559794
Genome browser
AA seq
2622 aa
AA seq
DB search
MAVELVGKRCLCASGGESLELAGVSRWSWRAGVIRATTDSSALTVCVHWDGEQCAERKWR
RLREECEVVLLEQDLVWAAKRTSTDSSIVNEKTSQQPALRFQPLIGQSCMGGVSVVEFIS
DRQLEFYTEKEELQQFEDEVDSGNPAVRDDPSLQEKVQAWLRQSHFQNTLRKDACTLNGL
RVKVFRQDYKTQWLSGVITHYDQNNRTMSVMTDQIQEVVKVDPLLVQVMLLDDDAHSSLM
GENSKCKSQITKINRVFLGTGNRSSNTTATDQMCNYRPVQQQSELCIQNCSTEEEKDMIR
EDKSNDEEKGDFSKSRNSHGERKRKKEEKEEEEKDEKERSICELKRLKAGCVSDLSENSD
SDSSCRLQDSSSDLGSKRQLKQHYTLKRPLDCEVHSPHQNKEPSPSQSGENKGQKSGKTH
SPGLSCNGLFRSTEAPECTAGISGRKAEEKSDGAMAEIEGRNEGASTEDSEAVSALLASQ
ESEQLVSMETTCVLLHTSPLECEGTEGEQEMLTCDPEVGGSEFTQMEARGSDFSESVVRR
SELTHSEPITASSDSAVSMEGLQRGTPPRSPIIPCNKKDSLDSKSSCSPAAINTEKGPDV
SLQNTQKLSMHISPCPSPKMTPKSQTVREMTKQKQSATSEVGLLKEGSPLANSAIDLKMA
TSPKVTCFIAPVLTQTSSLTPTRYKTPPNSPPCTPNCIPTPEKSTKSPLIVDRKEPFTIY
RDPALVKAELENHSPYIQPPHTPPNPKHNIKTPSPSSSSPSHTPSSSHSKLLSPSPHPAH
LSPIPLHSQVPLCSLNTPHSTIPHPHLLPSFLPALPSSAALLASHSRMGALGLPHHSLTL
PGNPSLLSQNPSTAHLTSLGLYPLLWPSFSNGAHSYAGLGLPASKWAHPDSSGISDSSVR
RNTPSPWLTQPTPVTADGQGLHSPLPIRPSSADPQKISRNAQSCTPTSKTTEELERRVIN
DSPSSINTHLKSEQERVRVTVGKNGLAYCPVALESPPNRTTQPLVVYDLTGERPNRYQEE
NRRILQESIDVAPFTAKLSSDREQRYPRSPISAFPAKEKEKEIERERERDRERDVHAFRH
ALSPRPQSAHPTPTLTQNSYYTSLSNSVENKPPQRRAPASKELYERLSANNTIASDMTPS
NTQNLIKVRPPPLVQSHHEREEGLLGKITEQLVHKASSLEPVDVGTMERRGSGSSLITIS
SSTRSVPLLHRAPIFHPPAPLMAPKDSGHGRLSPPTLTPIQPMCLSGKAQKQQRPPTLMP
ELRHGMVDTKRPVVEKVSMISPAYNAQRGGVLHSQDKEPGGHTNGGVVRPHSTTASVIVR
STSHVHTTINYTVSDSGISQMHCGHMRPLESMSNPKDGSVQQKRGVLWTPLDTVHPINMT
TKGDLSTPINMTTKSNNNQIQSSCSVMHPLANLDTTHSRKDLVAEHCKRKEVVAVQPKIE
PSPSSSCSSRDFPYLKKHRAAVESRLNTHTIQSQYTTHSSDAIKHLSHPPNSGFESYTTL
TTHTVCPAHALEKDKNTFFNPIPTKCPRLATGTSSSVPINKQSSVANEKPPASALTNQSS
QSSQSNYHKLKKAWWTRHSEQDRDSATFQAGDASKTVITNAMSTSIPIKQEMNGLVNNWS
SQEDKDSSIDSRKSKILNRKYTLEDKKSAQDNRKNSAENKKFNGNAIGSNLEDKKPIMAN
DKSVTAGKNSSLEDVKLDGNDKLEAKDSTPKDKSNDKRLTPVHTSPEKHGEKRSFQFSDD
SENGGESENESETGGSGQRFKRQSKPSLKLRQNDHQKKKEETKLEEVEDGDEETKHNGTL
QSSKDKTQQRLSNSNGIPRSVLKDWRKVRKLKLTGEAFLQDDSCGEIGPNVQKCRECRVD
RSRKAQEPAISPVFCRFYYFRRLSYSKNGVVRVDGFSVSEQTDEEAVTVWTGRSEDEEDR
KRKEMDLETSKYVLKLIGDKFCQLVKTENTAVTWVKKDTQVMWKRAVRGVREMCDACEAT
LFNMHWACHKCGFVVCMDCYKAREKRKAKDKELYVWVRCVKNQPHDLKNLMPTQIVPETV
LADMQSSMHSIRETNGIPSHCSCTDGKTLNHSMATTNGLSPFSDKDQSDLKSLEISDQQK
NAQHGALRAHQEKRDCDNVKAHKKKSTSPEQGSTLRDLLTSTAGKLRLGSTGGAFAPVYD
SSEQVAQNTRMPNILDDIIASVVENKIPATKMARLGPIQDLVTEEEVGQRPEGVKFDESP
LADPNTTVPHDWLGNHRLLWLKDHRHQGNQRLFNENWTQAQPVLVSGVHKNLNGSLWKPE
HFSREFSSLHSDLYNCRDGSVTNSRVKDFWDGFEDVSKRPKSAKGDPVVYRLKDWPSGEE
FLALMPARYHDVMKTLPVPEYTDPEAHLNLASHLPSFFIRPDLGPRLCCAHGVTACLEQD
FGTSNLHVEISDTMSILVYTGVAKGNGAPSKTGVLKLLEKEVLDESVKKRLRDPHETPGA
LWHIYMSKDMQKIQEFLQKVAAEQAEADPEADSDSEWEGDPDPLREGGWYLSPRLRQRLH
DEHGVESRTLLQFHGDAVIIPAGSLHQVMNLHSCIQVNVDFVSPEHAHNSYYLTQELRPL
KDQVNYEDKLQVKNIFYHSVKDAVATARKHLKENNEEVKEES
NT seq
7869 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagctggtggggaagcggtgcctgtgcgcgagcggtggagagtcgctggag
ctcgcgggagtctcgcgctggagctggagagccggagtcattcgtgcgaccaccgactca
tctgcgctaacggtgtgtgtacactgggacggtgagcagtgcgcagagaggaagtggagg
agacttagagaagaatgtgaggtggttttgttggagcaggaccttgtgtgggctgccaaa
agaaccagcactgacagcagcattgtcaatgaaaagacaagccagcaacccgccttgaga
ttccaacctctgattggtcagtcatgtatgggaggcgtgtcagtggtggagtttatctct
gacagacagctggaattctacacagaaaaggaggaactccagcaattcgaggatgaggtg
gacagtggaaatccagcagtgagggatgatccgtctctgcaggaaaaggtccaggcctgg
ctcagacagagccatttccagaacactcttcggaaagatgcttgtactctaaatggtctg
agagtgaaggtgttcagacaagactataaaactcaatggctgtctggagttatcacacac
tatgaccaaaacaacagaacaatgtctgtcatgactgaccagattcaagaagttgtgaag
gtagatccgttgctggttcaggtaatgttactggatgatgatgctcactcctcgctgatg
ggagaaaactcaaaatgcaaatctcagatcaccaagatcaacagagtttttcttggcaca
ggaaacagatcaagtaacactacagcaactgaccagatgtgcaactacaggccagtgcag
cagcagtctgagctgtgcatacagaactgcagcacagaagaagagaaagacatgataagg
gaggataagagtaatgatgaagagaaaggagatttttccaaatccagaaacagccatggt
gagaggaaaaggaagaaagaagagaaagaggaagaggagaaagatgaaaaggagaggagt
atatgtgagttgaagaggttgaaagcaggctgcgtgtccgatctgtctgagaacagcgat
tctgattccagctgcagattgcaggattcatcctcggatttaggatcaaagagacagctg
aaacagcattacactttaaagaggcctttggactgtgaggtacactccccccaccaaaac
aaggaaccttctcccagccaatcaggggagaacaagggtcagaaatccggaaaaactcat
tcccctggactttcctgtaatggtttgttcaggagcacagaagcaccggaatgtactgct
ggaataagtggtaggaaagcagaggagaaaagtgatggagccatggcagaaatagagggc
aggaatgagggtgcatctacggaggactcagaggctgtgtctgcactgctagcatctcaa
gagagtgagcagctggtctccatggagactacatgtgtgcttctacacacatcacctctg
gagtgcgaaggaaccgagggggagcaggagatgttaacgtgtgatccggaagtcggaggc
tcagagttcacccagatggaggcgagggggtcagatttcagcgagtcagtggtcagaaga
tcagaactgacccattcagagcccattacagccagcagtgactcggcagtctctatggaa
gggctgcagaggggaacaccacctcgttctcccatcataccttgcaacaaaaaggacagc
ttggattctaaatccagttgctctccagctgctataaacacagaaaaaggacctgatgtt
tccttacagaatacccaaaagctcagtatgcacatcagtccttgtccatctccaaagatg
acacctaaatctcaaactgtgagggagatgactaaacaaaaacaaagtgcaacttctgag
gtgggcctgttaaaagagggctctcctttagctaactctgcaatagacttaaaaatggca
accagtcccaaagtgacctgcttcatagctccagttctgacccagacctcctctttaacc
ccaactcgatacaaaacgccacccaattctcctccctgtacacctaattgcattcccacc
cctgaaaaatccaccaaaagcccacttattgtggacaggaaagagccctttaccatttac
agagaccctgcactagtaaaggcagagctggagaaccactccccctacatccagccccct
cacacaccaccaaatcccaaacacaacattaagacaccatctccctcttctagctccccc
agtcataccccttcttcttcccacagcaaactactgagtccctcccctcatcctgcacac
ctctcgcccattcctctccactcccaggttcctctctgttcccttaacacgccccattcc
actattcctcatccgcaccttctcccctccttcctgcctgcactcccttcttctgccgca
cttttagccagccattctcgtatgggagctctcggccttccccaccattctttgaccctt
ccaggcaacccatctcttctgagccagaaccccagcacagctcatctgacatcgcttgga
ctctatcccctcctttggccctctttttctaacggagctcacagctacgctggacttggc
ttaccagcctccaaatgggcacaccctgacagctctggcatctctgacagcagtgtgagg
aggaacacaccaagcccttggcttactcaacccacccctgtgactgcagatggacaagga
ttacattccccactacctattcgaccctccagcgcagaccctcaaaaaatatccaggaac
gctcaatcttgcacacctacttctaaaaccacagaagagttagagagaagagtcatcaat
gatagtccaagctccataaacactcaccttaaatctgagcaggagcgggtccgtgtaaca
gtggggaaaaatggcctggcatactgcccagttgccctagagtcgccccctaatcgaacc
acacagccccttgttgtttacgatcttacaggtgagaggcccaaccgctaccaagaggag
aaccgccgtattcttcaggagagcattgatgtagcaccattcactgctaaactgagctcg
gatagggaacagcgataccctagaagccctatctctgcttttcctgctaaagagaaggag
aaggaaattgagagggagagagagcgagacagagagagggatgttcatgcattcagacac
gctctgtctccccggccacagtcagcccatcccacccctaccctcactcagaacagctac
tacacatctttgtctaacagcgtggagaacaagcctccacaacgacgagccccagcaagt
aaagaactctatgagagactcagtgccaacaacactattgcctctgacatgaccccatcc
aatacacagaacttaatcaaagtcagacctccacctctagtacaaagccaccacgagaga
gaagaaggtctccttggaaagatcacagagcaacttgttcataaagcctcttccctggaa
ccggttgatgtggggactatggaaaggagaggatcaggttcgtcactcattaccatctct
tcttccacccgcagtgtgcccttacttcaccgagcccctattttccaccctccagcacca
ctgatggctcccaaagactctggacatggaagattgtccccacctaccctgacacccatt
cagccaatgtgtttgtctggtaaagctcagaagcagcagaggccgcccactttgatgcct
gaacttagacatggtatggtagatacgaagaggcctgtggttgaaaaagtgtcaatgata
tcaccagcttataatgcacaaaggggtggagtgttgcacagtcaagataaagagcctgga
gggcacacaaatggtggtgtggtcagaccacattcaacgactgcatcagtcatcgttaga
tcaacaagccacgtgcacacaacaataaattacaccgtctccgacagtggcatttcacag
atgcattgtggtcacatgagaccactggaaagtatgtccaaccctaaagatggcagtgtt
caacaaaagagaggggtcctgtggacacctctggatactgttcaccctatcaacatgact
acaaagggggatctcagcacgcccataaacatgaccactaaatctaataacaaccaaatt
cagtcaagttgctcagtgatgcaccccttagcaaacttggacaccacgcactctagaaaa
gacctagttgcagagcactgtaagaggaaagaggttgtggctgttcaaccaaagatcgag
ccctctccctcttctagttgctcttctagagactttccttatctgaagaaacacagagct
gcagtcgaatcaagacttaacacacatacaattcagtctcaatacactacacattcttca
gatgctataaaacatctctcacaccctccaaatagtggattcgagtcttacactacactc
actacacacactgtttgtccagcacatgctttagaaaaagataaaaatactttttttaac
cccattccaactaaatgtcccagactggcaacagggacttccagctctgtacccataaac
aaacaaagctcagttgccaatgagaagccacctgcctcagccttaaccaaccaatcatct
caatcaagtcagagcaactaccacaaactgaagaaagcctggtggactcggcattctgag
caagacagagacagcgcaaccttccaagcaggagatgcctccaagacagttataaccaac
gcaatgagcacctccattcctatcaaacaggaaatgaatggactggtgaataactggtcc
agtcaggaggacaaagattcttccatagacagcagaaagtccaaaatactaaacagaaag
tatactttagaggacaagaagtctgctcaagacaacagaaaaaacagtgcagaaaacaag
aagtttaatggtaatgctataggttccaatttagaggataagaaacctataatggccaat
gataaatcagtgacagcaggcaaaaattcgtctttggaagatgttaagttggacggaaat
gacaagctggaggccaaggactccacccctaaagacaagtctaatgataaacgattaacc
ccggtacatacgagccctgagaaacatggggagaaacgatcgttccagtttagcgacgac
agtgagaatggaggggaatctgaaaacgagagtgagaccggtggatcaggacaaaggttt
aaacggcagtccaagccctccttaaaactaaggcaaaatgaccatcaaaagaaaaaggaa
gagactaaacttgaggaggtagaggatggggatgaggagacgaaacacaatggaactctg
caaagttcaaaggacaagactcaacagaggctgtccaacagcaatggcatccctcgctct
gtgctgaaagactggcgaaaggtgaggaagctcaagctaactggagaagcgttcttacag
gatgactcatgtggtgagattggccccaacgtgcaaaagtgcagagagtgccgtgtcgat
cgttcgcgcaaagctcaggagcctgccatctcgcctgtcttttgccgattttactacttc
agacgtctgtcatacagtaagaatggcgttgtccgtgtggatgggttttccgtgtccgaa
cagacagatgaggaggcggtaacagtgtggacgggaagatcagaggacgaggaggacagg
aagagaaaagagatggaccttgaaacatcaaaatacgtcctgaagctcattggagacaag
ttctgtcagctcgtaaaaactgagaacactgctgtcacctgggtcaagaaagacactcag
gtcatgtggaagcgagcagtgcggggtgtaagggagatgtgtgatgcgtgtgaggccact
cttttcaacatgcactgggcgtgtcacaagtgtggctttgtagtgtgcatggactgttac
aaagcccgtgagaagaggaaagcaaaagataaggagttgtatgtttgggtccggtgtgtg
aaaaatcagccacatgacttgaagaacctaatgcctactcagattgtcccagaaacagtg
ttagcagacatgcagagctctatgcactcgataagggaaacgaatggaatcccgtcccac
tgttcctgcactgacggcaaaaccctcaaccacagcatggccactacaaatggactctca
ccattttcagacaaagatcagagtgatttgaagagccttgagatctcagatcagcaaaaa
aacgcacagcacggtgccctgagagcgcaccaggaaaaaagggattgtgacaatgtgaaa
gctcacaagaagaaatccaccagtccagaacaaggatcaacgctgcgtgaccttctaacc
tccacagctggaaagttacgccttgggtccaccggaggtgcatttgcaccagtttatgat
tcctctgaacaggtggcccaaaacacccgtatgcccaatatcctagatgacattatcgct
tctgtagtagaaaataagattcccgctacaaaaatggccaggttgggtccgattcaggat
ttggtgacagaggaggaagtgggtcaacggccagagggtgtgaagtttgatgaaagccca
ttggctgatcccaacaccactgtccctcacgattggctgggaaaccaccggctgctttgg
ctcaaagatcaccgtcaccaaggcaaccaaagactgttcaatgagaactggacacaagca
cagcccgtgctagtgtccggagtgcacaagaacttgaatggtagcctatggaagcctgag
cacttcagccgtgagttttccagtctccacagtgacctctacaactgcagagatggcagt
gttacaaactccagggtcaaggatttctgggatggttttgaggatgtgtcaaaaaggcca
aagtctgcaaagggggacccggtggtgtacagattgaaggactggccatcaggggaggag
tttttagcccttatgcctgctagatatcatgatgtgatgaagactttgccggtaccggag
tacacagacccagaggctcaccttaacttggcctcccacctgccctccttttttattcgt
cctgaccttggtcctcgcctctgctgcgcccacggtgtaacggcatgcctggagcaagac
ttcgggaccagtaatctacatgttgaaatctctgataccatgagtattctggtatatact
ggtgtggctaaaggaaatggggctccatccaaaacaggtgtgttaaagcttttagaaaag
gaagttctggatgagagtgttaagaaacgactgagagacccacatgagactccaggagct
ctgtggcacatctacatgagtaaagacatgcagaagatccaggagtttcttcaaaaggtc
gctgcagagcaggctgaggcagatccagaggcagactctgactcagagtgggaaggtgat
ccagaccccctgcgtgaaggtggctggtatttaagccccaggttgagacagaggctgcac
gacgaacatggcgtggagagccgtacactcctgcagttccacggagatgctgttataatc
ccagctggatcactgcaccaggtgatgaatctgcacagctgcatccaagtaaatgtggac
tttgtttcccctgaacatgcgcacaactcctattacctaacccaggagcttcgcccactc
aaagaccaagtgaactatgaagacaaactccaggtgaagaacatattctaccactctgtg
aaagatgctgtggccacagcgaggaagcatttaaaggagaacaatgaggaggtaaaagag
gagtcctga
DBGET
integrated database retrieval system
