Paramisgurnus dabryanus (large-scale loach): 135778557
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Entry
135778557 CDS
T10799
Symbol
dhx15
Name
(RefSeq) ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135778557 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135778557 (dhx15)
03009 Ribosome biogenesis [BR:
pdab03009
]
135778557 (dhx15)
Enzymes [BR:
pdab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135778557 (dhx15)
Spliceosome [BR:
pdab03041
]
Complex A
U2 snRNP components
U2 related factors
135778557 (dhx15)
Complex B
135778557 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
135778557 (dhx15)
Ribosome biogenesis [BR:
pdab03009
]
Eukaryotic type
90S particles
Helicases
135778557 (dhx15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
Atrophin-1
nSTAND3
AAA_25
Cas3-like_C_2
SRP54
Flavi_DEAD
AAA_29
nSTAND_NTPase5
DUF3915
Motif
Other DBs
NCBI-GeneID:
135778557
NCBI-ProteinID:
XP_065145011
LinkDB
All DBs
Position
2:46436732..46471592
Genome browser
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKRRSSEGKDRDRDRDERPKDRDRDRDRDRDRDRERDSKSSSAAL
SSSVPSGVGMIPLKQTAMHQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDILNRH
QSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRGVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRTDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLP
PQQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHA
FKQNHESVQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRAL
VTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYEMGNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgacatcgcttggatttaggcgacgattattcgtcgagcaaaaggagatca
tctgaaggtaaagaccgtgacagagaccgggatgagcggccaaaggatcgtgaccgcgac
cgtgacagagatcgtgatagggacagagagagagacagcaagagctcgagtgcagccctc
agctccagtgtgcccagcggtgtcgggatgatcccacttaagcagacagccatgcatcag
cagatcaaccccttcaccaatctccctcacaccccacgctactatgagatcctcaagaag
aggctgcagttgcccgtttgggaatacaaagaacggtttaatgatatcctcaatcgtcat
cagagctttgtgctggttggagagacaggctctggaaagaccacacagattcctcagtgg
tgtgtagacatggtgagggctctccctggccctaagcgtggagttgcttgtacacagcca
cgtagggtggcagccatgagtgtggcacagagagtcgcagatgaaatggatgtcatgctt
ggacaggaagttggatactctatcagattcgaggactgtagctctgcaaagaccattctg
aaatacatgacagatggtatgttactccgtgaggctatgaacgaccccttgctcgagcgt
tatggtgtcattattctcgatgaggctcacgagcgcacgctagcaacagacattctgatg
ggcgtcctcaaagaggtggtgcgtcagaggacagaccttaaggtcatcgtgatgagcgcc
accctggatgctggaaagtttcaagtttatttcgacaactgccccctgctcactattcct
ggccggacacatcctgtagagatcttctacacacccgagccggagagagactacctggag
gccgcgattcgcacagtcatccagatccacatgtgtgaggaagatgagggagatgtactg
ctcttccttactggacaggaggaaatcgacgaagcttgcaagcggatcaaacgtgaaatc
gatgacctgggcccagatgttggagacatcaaaatcatccctctgtactccacactgcca
ccacagcaacagcagaggatctttgagccgcctccaccacgcaaaccgagcggagccatt
ggcaggaaggttgtggtttcaacaaacatcgccgagacgtccctgaccatcgacggggtt
gtgtttgtaattgatcctggctttgccaagcaaaaggtgtataaccctcgcattcgtgtc
gagtcgcttctcgtaacggctattagtaaagcttcagcccagcaaagagcaggccgtgcc
gggcgtacgcgcccgggcaagtgcttccgactgtacactgagaaggcctacaagactgag
atgcaggacaacacataccctgagattctcaggtccaatttgggttctgtggtgttacag
ctcaaaaagctgggtattgatgatctggtgcactttgacttcatggaccccccagctcct
gagacgctgatgcgagccctggagctgttgaactacctagcggcgctgaatgacgacggt
gacctgacggagctgggctccatgatggctgagttcccgcttgacccccagctggccaag
atggttatcgccagctgtgagttcaactgctccaatgagatcctctccatcactgcaatg
ttatcagtcccacagtgctttgtgcgacccaccgaagctaagaaggcagccgacgagtcc
aaaatgaggttcgcccatattgacggagaccacctgaccttgctcaacgtctaccacgcc
tttaaacagaaccacgagtctgtgcagtggtgctatgataacttcgttaactaccgctca
ttgatgtcggctgataacgtgcggcagcagctctcccgcatcatggatcgctttaacctc
ccacgacgcagcacagagtttaccagccgagactactacatcaacatccgtcgtgctctg
gtcaccggcttcttcatgcaggttgctcacctggagcgtacgggacactatctaacggtg
aaggacaaccaggtggtccagttgcacccttccacagtactggaccataagcccgagtgg
gttctctacaacgagttcgtgctgaccaccaagaactacatccgcacctgcactgatata
aaacccgaatggctggtgaaaattgctccacagtactatgaaatgggcaactttcctcag
tgtgaagctaagaggcaattggagcgcatcgtcgctaaacttcaaaccaaggaatactcg
cagtactga
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