Paramisgurnus dabryanus (large-scale loach): 135778617
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Entry
135778617 CDS
T10799
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135778617
Membrane trafficking [BR:
pdab04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
135778617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_7
CFAP70_TPR_C
SH3_1
TPR_10
TPR_NPHP3
ARM_TT21_4th
TPR_19
SH3_9
IL11
ANAPC3
Motif
Other DBs
NCBI-GeneID:
135778617
NCBI-ProteinID:
XP_065145098
LinkDB
All DBs
Position
2:43979385..43999375
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AA seq
1310 aa
AA seq
DB search
MSAATTSVNSFKIGNSVGYEQDKNRSIRRELSIEYSRNELDSIMGTSRDADFKTSMGSVQ
RTAAASEENIPTVLAMQLAMVEGPDRLPADTGTQEVLCRKLCVLEADLTEVTNLISELSA
HLVSLNSGERTIYITFKSLEEIWRFSTYCRMGFLGQCMENLLMDQEFWLMSLDQDSGIEI
SIQEEELNLMYKGFLMQEGSFFGCCTANQMFDSSTSGSDLYLEKGDIALFEPPFLGSGWT
VLSLADGSRGTKPKPALEPVIPFHEWFLKSCPESILVGGGKHTSHLPFQIAVGVCETKEA
YDADGPDELSFQAGDHIIILGLLMGCFEWFMGKLERTGDIGLVKTSMVKATDSVCESPEI
YLKDEDRRIVALDEEKIKEETITLLKKACQCDVGTNYKLDKSHQIETNNQTQKVSHILSE
INEAPKKGLPLNSNRHQTQNQAVDTEASGGTQHFSVCFDQDSTCRDGHHAFLSFLNSRDF
QSEFQLLYSAYPEFLISHFHGHRDEEDIVAYLVEARELAQKRRLSWAHSRICFLLGQLCA
GRSKFSQARVYYEEALSVPRDYFTDMFLLSAIYSNLALIYLTQKKHDKFFTSSERLSAML
MSVPNCLFGCEEPEILKYVLKKAILAKNKSAEARACFLLAKLHLKLQDGMSAIPFIERLQ
ILSDEVSVACDGTWSHASLVLARLYSDQCLPHLAESCAHRASLKVGATVSHCLCGILLLL
ENASELSGVTIPTQVAPYLTQAAALVSSNDNPALRHAHALCLSWLFHKHGMPDRAVRYMR
TFLDHQTIKQTDATDALMWLAWLYICNQQPDSALEVLDGVLSSLPEHCTTQLEGVVYNMR
AIAYRRSSDIRQAAESYQAATEICEEFEDRHNWAIVLANFGFMCLQVKANRLAEEYLTRS
VELFSELKDEGHELSFISVLLELGRYFISKGSYESAKIYYEWALLIAIHINDMESQLGAI
RHLCHLYEELCPDEAQCIIYNEHQLNLLQQIGDTRLEGEILEKISQLYLNLGTERANRTA
LDYTKRSLGIFIDLGRKRKEAHAWLQAGKIYHILKQTELVDLYIQVAQDMALTTGDTLFT
LELLEAAGDVFFNSSRDREKAICFYRDRALPIAVKTSSVRSQLRLCNKLSELLLQLRQFS
EAIEFARTALDISVSLADHLNERVAFHRLATLYHCLEQYEMAEHHFLKALSLCPSPLQYD
EEALYYVRVYQTLGDIIFYDLKDPFDAAGYYHLALAAAMDLGNKRSQLELCTRLATVYHN
FLMDRELSLFFYQRARAFANDLHIRRVNLDPYQNFRTTAQYKNTISGTTR
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgctactactagcgtaaactcattcaaaatcggtaacagtgtaggatacgaa
caggacaaaaaccgatcgatacgtagagagctttctattgaatactcacgcaatgaactg
gatagtattatgggcacttctagagacgcggattttaagacctcaatgggaagtgttcaa
agaaccgcagcagcttctgaagaaaatatacccacagtgttggctatgcagttggctatg
gtggaagggccagatcgacttcctgctgacacgggcacacaggaagtactgtgcaggaaa
ctgtgtgtgctggaagctgacctcacagaggtcaccaacctaatctctgaattgtcagcc
catttggtgtctctaaacagtggcgaaaggactatatacatcacttttaaatctttggaa
gaaatttggaggtttagtacatactgcagaatgggcttcttgggtcagtgcatggaaaat
cttctcatggaccaggagttttggttaatgtccctcgatcaggattcaggaattgaaatc
tcaattcaagaagaggaactgaatctgatgtataaaggctttctaatgcaggaagggtcc
tttttcggctgctgcactgcaaatcagatgttcgatagctctacatcaggcagtgacctt
tacctggagaagggagatatcgctcttttcgaacctccattcttagggtcaggatggaca
gtgctgtccctggctgatggatctagaggaaccaaaccaaaaccagctctggaaccggtc
attccttttcatgagtggtttttaaagtcatgtccagagagtatattagtgggtggagga
aagcacactagtcaccttccattccagattgcagtaggagtgtgtgagacgaaagaggcc
tatgatgctgatgggccagatgaactgagctttcaggctggagaccacatcatcatcttg
ggcttgctgatgggctgttttgagtggtttatggggaaattggagagaactggtgatatt
ggacttgtcaagaccagtatggtcaaagcaacagattctgtttgtgaatcacctgaaatt
tacttgaaagatgaggacaggcgaattgttgcattggacgaggagaaaattaaagaagag
actataaccttattgaagaaagcatgccaatgtgatgtaggaacaaactacaaacttgac
aagagtcatcagatagaaacaaacaaccaaacacaaaaagtcagccacattttgagtgaa
ataaatgaggctccaaaaaaagggctaccattaaacagcaacaggcaccaaacgcagaat
caagccgttgatacagaagcatccgggggaacccaacatttttctgtctgcttcgaccag
gacagcacatgtcgagatggacatcatgcattcctctccttcctgaacagccgtgacttc
cagtcagagtttcaactcctttacagtgcttacccagaattcctcatctcacatttccac
ggtcaccgtgatgaagaggatatagtggcatatttagttgaagcccgagaattggcacaa
aagagacgcctctcatgggcgcacagtcgaatctgtttcctccttgggcagctttgcgca
ggaaggtcgaagttctctcaggcccgggtttactatgaggaagctttaagtgtacccagg
gattattttacagacatgtttctgctctctgctatttactccaacctggcgctcatctac
ctaacacagaaaaaacatgacaaattcttcacttcgtccgaacgcctttctgccatgtta
atgtcggtgcctaactgtctgtttggctgtgaggagcctgagatattaaagtatgttttg
aaaaaagcaatcctggccaagaataaatctgcagaagcccgagcctgctttcttttggca
aaactccacctgaagcttcaagacggtatgagcgcaattccgtttattgaaaggcttcag
attctttctgatgaggtttccgtagcttgtgatgggacatggagccatgcttccctggtg
ttagcaagactctacagcgaccagtgtctgccacatttggctgaaagttgtgcacatcga
gcatcacttaaggtgggagccactgtatcacattgtctttgcggcatcttgctcttactg
gaaaatgcatcggagctgtccggagtaaccatcccaactcaggtggctccttatctgacc
caagccgccgccttagtgtcctccaatgataatccggctctccgtcatgcccatgccctg
tgcttatcctggctcttccacaaacacggcatgcccgacagagctgtccgttacatgcgt
accttcctcgaccaccaaacaatcaaacagacagatgctaccgatgctctcatgtggttg
gcatggctgtacatctgcaaccagcaacccgacagcgctctggaggtgctggatggtgtg
ctgtcgtcactccccgagcactgcaccacacagctggaaggcgtggtgtacaacatgcgt
gccatcgcatacagacgttccagtgacattcggcaagctgctgagagttaccaggctgca
actgagatatgcgaggagtttgaggatagacataactgggccatagtgctggccaatttc
gggttcatgtgtttgcaggtcaaggcaaacaggttagcggaggagtacctcacccggtca
gtagagctgttctcagagttgaaggacgaaggacatgaactcagttttatttctgtgctt
cttgagttggggagatacttcatttccaagggaagctatgagagtgcgaagatctattat
gagtgggccctgctgatcgccattcatattaatgacatggaaagccagctgggagccata
cgtcacctgtgccacctgtatgaagagctgtgtccagatgaagcccagtgtatcatctac
aatgagcaccaactgaacctcttacagcagattggagatacgagattagaaggagagata
cttgagaagatcagccagctgtaccttaacctgggcacggagagagccaacaggactgct
ttagattacaccaagcgcagcctgggcatcttcatcgacttgggcaggaaaaggaaggag
gctcatgcctggttacaggctggaaagatttaccacatcctcaaacagaccgagttagtg
gacctttacatacaggtagcccaggacatggccctcaccacaggagacacactcttcacc
ctggagcttttggaagcagccggagatgtgttcttcaacagctcacgagacagagagaaa
gccatctgcttttatagggaccgggcccttcccattgcggtaaagaccagcagcgtgcgc
tctcagctcagactgtgtaacaaactttcagagctcctgctacagttgagacagttttca
gaggccattgagttcgctcgcactgcgttagacattagcgtgagtctggctgaccattta
aatgagcgtgtggctttccatcgacttgccacattgtatcattgtctggaacagtatgaa
atggcagagcaccactttttaaaagccctttccttgtgtccctcacccctgcagtatgat
gaggaagcgttgtattatgtcagagtttaccaaacactaggagacatcatcttctatgat
ctaaaggacccatttgatgctgctggttattatcatcttgccctggctgctgctatggac
ctgggcaacaagaggtctcagttagagctgtgtactcggttggctactgtctatcacaac
tttctcatggaccgtgaactctcacttttcttctaccagcgagctcgggcattcgccaat
gatctccacattcgtcgtgtcaacttggatccataccagaacttcaggactaccgcacag
tacaaaaacacaatatctgggacaacaagataa
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