Paramisgurnus dabryanus (large-scale loach): 135778683
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Entry
135778683 CDS
T10799
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
135778683 (tp53bp1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
DUF4537
Motif
Other DBs
NCBI-GeneID:
135778683
NCBI-ProteinID:
XP_065145245
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Position
2:complement(41705459..41726249)
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AA seq
1777 aa
AA seq
DB search
MDSGESDLDSSFPQTENPCLIVEDSQPDSVALEDDPDTSYSALLARRLSNLQPTSHSPVL
ELISSPSKSHLQSGSQIDKCDGTAHLDNSQSNLGSAVREHSQVFEVCCLPKSKRDNKEHM
ESEDITTTHCTETHEEMSQFGMLELSESQGVHDEEDQLDGAPANQRESPKPASQCDLKSS
ERTSACQDEGSRGSEVSSSSSSGPQGGESRKLSVQAILHSQVSDSQENEDDDLISSQDDM
FEKERNGTKADSSAMPTSTPAHSLRLLHLSGQGTLVQESLSQQSVDFVAATQDNLSQTPF
IVPNSPTEKEQNLNEAAGSPMDTSGPLEDQQQKREEEPMDMDTCPKPQPTASTPVSQNSP
GFVLEKSLSVPSQPEFSHDVFISTPSLEPGNNSPGTESLKRKLLQKKDSQSESPKQTGPP
ENVNRSSSSSLQPSEVAECFQLELSTENNNSEKTPAFIVEEDSQATQIVEEEETLDVDKS
NSVPKCHSQNPSKNGMDPQPEQPSQKSQNKVHDSNSTSAVHEKVDDCSSQKFSLSGNIGN
PDIRSSPGPVQSQLSVTADCVSDTPSLPQKSNTTDLTAASSSQTSVSADRPVSSAVPEPS
QTSQSLSVLNVSSQKNTENEKVHISQSQRPSQPMTHSHSVITDSVKNTIDDERMDESEIQ
STVKGVDIRLNLALSQSEVLSPEPMEEDENAKQEKEIPVPSTDLQSSSKEESFSVMVLEE
SQRVSQEKVKRSQPFLSFSQPAGGSVQVKIKPTAKISGSQPLRSTEVSPLQLEKTKSQST
KARDEGQSKDLERMNSDNAANKSLSDSSGELPFHFTLPKEGELIRPAVSATPPQISQLKK
TPRHSTPIEMTSFSEPSEGDVTRETTMAASEISVEESREGEEPAVMEGDGKLSLRMKLVT
PVEEGNSGSEHFSLQKPPLTDEEGSVSKAATVAMAVTSSSVFSRVREAHRQIQVEDDVES
SGLPISRQPSQTLNSPPNTNDSVLSPNLPRETADRSFDRVKEAVPHQSQHPHGTDANSEP
LISGLSPPAREQEVLNTSDRPSPRTPVRQKAVSQQTSVDIPSTTSPPSKRAVSQQTSFDL
PRPHNLSARGEQSTPTRTQPGPSLRRHIRTIQEVRTTVTRIITDVYYEDGREVDRKVTHE
SEEPTVDRCVVENDMSPSRTGSSMTSGDLADVSSLSSKAPSHHSSIGTSSGGLGPIRMPD
FIMPPSRGSKSGSPRRGGRQQPRTNSVAVGLEVTDARGSRVITQLSPRGRARRGRPPSRS
PLSRGGRVGLGDGSHGQVASSSEDEPYVRPPGSPLEPSTTSRSDSLNTTSPDNSTGTSSF
VGLRVLAKWSSNSYFYSGTITRDLGENRFRLLFDDNQECEVQGKDILLCDPIPLETEVTA
LTEEEYFNIGVVKGHKNQGSEFVYCVEKDGQTMWYNRTSVILSMEQGSRLREQYGLGPYE
PSTPNNMASDISLDNLVEGKRRRRGNPSGPTTPTRSSTNSPRTPGKRKLMSGTEDEKTPP
KRGRRGGGARFGQRTAACNTSGSGVDLPSDPNDLVATHGPLPENSSLFMGFVFMLTASSE
SDRDSNHQNSDEDEEYVQRTPYNKEYTVRQLEAGGGMILLDFNEEQCKAAYQSLLIADQH
CRTRKYLLCVAGGVPCVSQMWVRDCCQEKKLLNYRNYLLPAGLGPDGGIVEWHPRCNPFK
ALKVLLLSEDRVDLWTSLLLMGGAEKVHHHKEKEDISDIPAVKFDLAMASSACQSEAVKA
VTPDLPVVSLEWLIQSLTCGKCLSYDSNSEFCHNRST
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atggattctggtgagagtgatcttgattcaagttttcctcagacagagaacccctgcctt
atagtagaggactcgcagcctgacagtgttgctctggaggacgaccccgacaccagctac
tctgctcttctggcccgtcgcctctctaacctccagcccacatctcacagccctgtgttg
gagttgatttcttcgcctagtaaaagtcatttgcagtccggcagtcagattgataagtgt
gacggtactgcccacttagacaattctcaatccaacttgggttcagcagtaagagagcat
agtcaagtttttgaagtttgctgtcttccaaaatcgaaacgagataataaagagcacatg
gaatctgaggatattaccaccacacactgcacagagacacatgaagagatgtctcaattt
ggtatgttggagctgtcagagagtcaaggtgtccacgatgaggaagaccagctggatgga
gctcctgccaatcaaagagagagtccgaaaccagctagccaatgtgacttgaagagttca
gagaggacgtcagcctgtcaggatgaaggttctagagggtcagaggtcagctcaagcagc
tcttcagggcctcagggtggggaaagcaggaagcttagtgttcaagctatactccactct
caagtttctgacagtcaagagaatgaagatgatgacctaatttcctctcaagatgacatg
tttgaaaaagagagaaatggcaccaaagcagacagcagtgccatgccaacatccacgcct
gcacatagcctacgtttgcttcatctgtctggccagggtacacttgtgcaagagagtctt
tcacagcagtctgttgactttgtggcagccactcaggacaatttgagccaaacccctttt
attgtcccaaattcaccaacagaaaaagagcagaatttgaatgaagctgccggatcccca
atggacacatcaggccccctcgaggaccagcaacaaaagagagaggaagagccaatggac
atggacacctgccccaaaccgcaacccacagcctccacaccagtgtcccaaaattcccct
ggatttgttctggagaaaagcctgtctgtgcccagccagcctgaattctcacacgatgtg
tttatttccaccccgagccttgaacctgggaataacagtccaggaacggagtctttaaag
aggaagttgctacaaaagaaggacagccaatcagaatcaccaaagcagactgggccacca
gagaatgtgaacaggtcttcaagcagctctttacagccctctgaggtggccgagtgcttt
cagcttgagctcagtactgaaaacaataattctgaaaagactccggcgttcattgttgag
gaggacagccaagccacacagattgtggaagaggaggaaactctggatgtcgacaagagt
aattctgtccctaaatgtcattctcaaaatccaagcaaaaatggtatggacccacagcca
gaacaaccttctcagaagtcacaaaataaggtgcatgattcaaacagtacaagtgctgta
catgaaaaagtggatgactgtagctctcaaaagttttcactatctggtaatataggaaac
ccggatataaggtcttcacctggtcctgttcaatcccagctttcggtcactgcagattgt
gtttcagacactccttctttaccgcagaaaagtaacaccacagatctgacagccgccagt
tcgtctcaaacctcagtatcagctgatagacctgtaagctctgcagtaccagaaccttca
caaacgtctcaatctctatctgtcctaaatgtttcctctcaaaagaacactgagaatgaa
aaagtacacattagtcagagccagaggcccagtcagccaatgacacacagccacagtgtt
attacagacagcgttaaaaatactatagatgacgagcgaatggatgaaagcgagatccag
agcaccgttaaaggtgtggatatcagactcaacttggcattgtctcagagcgaggtgctt
tctccagaacccatggaggaggatgagaacgcaaagcaagaaaaggagatacccgtacct
agcacagatcttcagtcctctagcaaagaggagagctttagtgtcatggtcctagaggag
agccagagggtctctcaggagaaagtaaaaaggtcccagccattcctaagcttctctcaa
cctgcgggcggctctgtgcaggttaaaattaagcctacagccaagatctcagggtctcag
ccgctgagatcaactgaggtttcacccttacaacttgagaaaactaagtcacagagcaca
aaggccagggatgaaggacagagcaaagacctggagagaatgaactcggacaatgctgcc
aacaaaagtctgagcgacagctctggagagcttccttttcacttcactcttcccaaagag
ggcgagttgatccgcccagcagtcagtgcaacacctcctcaaattagtcagctcaaaaag
acaccaaggcacagcactcctattgagatgacctcattctctgagccgtcggagggtgac
gttaccagagagacgacaatggcagctagtgagatttcggtagaggagagcagagagggc
gaggagccagctgtgatggagggagatgggaaactgagtctgaggatgaaactggtgacc
ccagtagaggagggcaactcgggttcagaacacttcagcctgcagaaaccgccattaaca
gatgaggaaggctctgtctccaaggctgccactgttgccatggctgtaaccagttcgtct
gtctttagtcgtgtacgagaagcccacaggcagatccaggtggaggatgatgtagagtcc
agtggccttcctatcagcaggcaacccagccaaacgctcaacagccctcccaacacaaat
gactctgtactgtctcccaacctcccgagagagacagcagacagatcctttgaccgagtc
aaggaagctgtaccccaccagtctcaacatcctcacggtacagatgctaactctgagcct
ctgatcagtggtctgtcccctcctgctagagaacaagaggtcctcaacacatctgacaga
ccttcaccacgcacacctgttcgccagaaagctgtttcacagcaaaccagtgtggacatc
ccctcgaccaccagtccacccagcaaaagagcggtgtctcagcagacaagttttgatttg
cctagacctcataacctgtctgctaggggagaacaaagcacacccaccagaacccagcca
ggtccatcattgcgccgacatattcgcaccatccaggaggtccgcacgacagttactcgc
atcattacggatgtctactatgaagacggcagagaggttgaccgcaaggtgacccatgag
tccgaggaacctacagtggaccggtgtgttgtggaaaatgacatgtccccaagccggaca
ggaagttcaatgacatctggagacctggctgatgtcagttcactgtcctcgaaagctccg
tcacaccacagctcaattgggaccagcagtggtggcctggggcccatcagaatgccagat
tttatcatgccacctagccgagggagcaagtctggaagccccaggcggggtggacggcag
cagccgaggaccaacagcgtggcggtggggttagaggtgacggatgcacgggggtctcgg
gtcatcacccagctaagcccccgtggccgtgcccggcgaggaaggcctccttcccgcagc
ccgctgtccagaggtggcagggtagggttaggagatggttcccatggtcaggtggcgtca
tcgtcagaggatgagccgtatgtccgaccaccaggcagcccattggagcccagcactaca
agccgctctgattcgctcaacaccacctctcctgacaacagcactgggaccagcagtttt
gtgggattgcgtgtgctggccaagtggtcgtccaactcgtacttttattctggaaccatc
acgcgagacctgggcgagaaccgtttccgccttttattcgacgacaaccaagagtgtgaa
gtacaggggaaggacattctgctgtgtgatcccattcccttggagacagaggtcacagcc
ttgacagaggaagagtacttcaatataggagtagtaaaggggcataagaatcaaggctct
gagtttgtgtactgcgtggagaaagatggtcagaccatgtggtacaacagaacatctgtg
atcctcagcatggaacaaggcagtcgcttgagggaacagtacggactcggaccctacgaa
ccttctacacccaataacatggcttctgatattagcctagataacctggtggaaggtaaa
cgaagacgaagaggaaaccccagtggcccgacgacccctacacgcagctcaaccaacagc
ccgagaaccccagggaaacgaaagctcatgagcggaacggaggacgaaaagacacctcca
aagagaggacgcagggggggcggggcaagatttgggcagaggacagctgcttgtaacaca
tctggaagcggcgtcgatttaccatctgaccctaatgacctggtggcaacacacggacct
ctccctgaaaactcctctctgttcatggggttcgtcttcatgctaacagcatcctctgaa
agcgacagagactccaaccatcaaaacagcgatgaggatgaagaatacgtgcagagaact
ccatacaacaaagaatatacggtgagacagctggaggccggaggagggatgatcctgctc
gactttaacgaagaacagtgtaaagcagcctatcagagcttgctgattgccgaccagcac
tgccgtaccaggaagtatctgctgtgtgtggcaggtggagttccctgtgtatctcagatg
tgggtaagggattgctgccaggagaagaaactgctcaactacagaaattacctgctgcct
gctggtctggggccagatggaggcattgtggagtggcatcctcgctgtaacccctttaaa
gccttaaaggtgctgctgctatcagaggatcgtgtggatttgtggacctctttgctttta
atgggtggtgcagaaaaggttcatcaccataaagaaaaagaagacatttctgacattcct
gctgtcaagtttgacctggccatggcttcatctgcgtgtcaatctgaggcagtgaaagcc
gtgacaccggacctgcctgtcgtctctctggagtggctcattcagagcttgacgtgtgga
aagtgcctcagctatgacagcaattctgaattctgtcataaccggtctacataa
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integrated database retrieval system
