Paramisgurnus dabryanus (large-scale loach): 135778725
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Entry
135778725 CDS
T10799
Symbol
sin3ab
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135778725 (sin3ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135778725 (sin3ab)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
135778725 (sin3ab)
REST complex
135778725 (sin3ab)
Heterochromatin formation proteins
Other heterochromatin formation proteins
135778725 (sin3ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Cas_Cas4
Motif
Other DBs
NCBI-GeneID:
135778725
NCBI-ProteinID:
XP_065145319
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All DBs
Position
2:complement(40615487..40639501)
Genome browser
AA seq
1259 aa
AA seq
DB search
MKRRLEDQETVIGSQRRPPGGADSFQHRVLNSASSLFETAPDNMQPSSSMQYSVSQTYQL
SMAQNSGGHGHTSNTAVLSGPHHHGPTVQTVGQGHSHTPAAPAPTLGQQQFQRLKVEDAL
SYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLP
PGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNLPITQPTPHQPQPAVPTSTAALVIPSQ
PTPAKISKPMQSPALTPTSQPNPSIPSYASPRSPSAQSHAPISNSTAGTAPLQNNQPVEF
NHAINYVNKIKNRFQGQPEVYKSFLEILHTYQKEQRNAKEAGGNYTPSLTEQEVYAQVAQ
LFKNQEDLLSEFGQFLPDANNSVLLSKTTAEKAESVRIDHGGTVKRPQLNNKQRFNQNGC
QIRRHSGPPTTPPVKKKPKFIGKDHPMAEASKIGAESLFFEKVRKALRSSEAYDNFLRCL
VIFNQEVISRAELVQLVLPFLGKFPELFTWFKNFLGYRESVHIESFPKERATEGIAMEID
YASCKRLGSSYRALPKSFQQPRCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEE
HIYRCEDERFELDVVLETNLATIRVLETVQKRMSRMSAEEQAKFRLDNTIGGSSEVIHRK
AIQRIYGEKAPDIIDGLKTNPAVSVPIVLKRLKIKEEEWREAQRGFNKIWREQNEKYYLK
SLDHQGINFKQNDTKVFRSKTLLNEIESLYDERQEQASEDNAAPLSGPHMTLTYEDSQIL
EDAAALIIHHVKRQSGIHKDDKYKIKQIIYHFIPDMLFARRGELSDVEEEEEEETEPDED
GTKKHNGTTSTKSKLLFSHTTASQQKLSNCDDAYNLFFVNNNWYIFLRLHQILCSRLLRI
YGQAEKQIEEDAREREWERNVLGLKREKNDSPAVQLRLKEPMEIDVEDYYSAFLEMVRNL
LDGNMETSQYEDQLREMFTIHAYIAFTMDKLIQSMVRQLQHIVSDEICVQVTDLYLSECA
NKATGGSQSTQTSRSGGEAAYQRKAEQLMSDENCFKLLFQKSKGSVQLAVELLDSEEENS
DETVEAERWPDYVERYLNTNSASPELREHLSQKPVFLPRNLRRIRKCQRGQEMQMREAKE
AAKKSSEAGEDSKMECMFKLNSYKMVYVFKSEDYMYRRTAQLRAHQSHQRVSTRLHQRFQ
AWLDRWRKDHVTSDMAATTYKWLMGEAQEGLLPCRTTCEPKIIHFQNVNKYKVSYSTTL
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccgcttggaggatcaggaaacagtgatcggctctcagcggcggcccccgggg
ggtgcggacagctttcagcaccgcgtccttaactctgcctcctctctctttgagactgca
ccagataacatgcagccttcatccagtatgcagtactctgtttctcagacctaccagttg
tcgatggcccaaaactctgggggacatggacacaccagcaatacagctgtgctcagtggg
cctcatcaccacggcccaactgtccagactgtgggtcagggtcactctcatactcctgca
gctcctgcaccaactctgggtcaacagcagtttcagagactcaaggtcgaagatgcactt
tcctatttggatcaagttaagcttcagtttggcaatcagccgcaggtctacaatgacttc
ctggatatcatgaaagagttcaagtctcaaagcattgatacaccaggtgtgatcagcaga
gtctcccagctcttcaaaggccaccctgacctcatcatgggcttcaacaccttcctgcca
cctggctacaaaatagaggttcagaccaatgacttggtcaacgtgaccacacctggccag
atccaccacattaccccacatggcatttcagttcaaaacctcccaattacccagccaact
ccgcaccagccccaaccagcagtccctaccagcacggctgcattggttatccctagccag
ccaacccctgccaaaataagcaagccaatgcagtctcctgcactgaccccaaccagccag
cctaatccatccattccctcgtatgcctcccctcgctcgccctccgcccagtctcacgcc
cccatcagcaacagtactgccgggactgccccactgcagaacaaccagcctgtggagttc
aaccacgccatcaactatgtgaacaaaatcaagaaccgctttcagggccagccagaggtt
tacaaatcctttttggagattttacacacataccagaaggaacagcgtaatgctaaggag
gcagggggaaactacacaccttctcttaccgagcaagaagtttatgcccaggtggcccag
ctcttcaagaaccaggaggatctcctttcagaatttggccagttccttccagatgctaac
aattcagtgttattgagcaagaccacagccgagaaggcagagtctgttcgaattgatcat
gggggcacagtaaagagaccccagctgaataacaagcaaagatttaaccagaacggctgt
cagatccgcagacactcgggacctcccactacaccacctgttaagaagaaaccaaagttt
attggaaaagaccatccaatggctgaagccagcaaaataggtgctgaatctctctttttt
gaaaaggtgcgaaaggcactgcgcagttcagaggcttatgacaacttcctgcgctgtctg
gtcattttcaatcaagaagtgatctcacgggctgaacttgtgcagctggtcttacccttt
ttagggaaattccccgagctttttacctggttcaagaactttcttggctaccgagaaagt
gtccatattgaaagctttcccaaagagcgggccactgagggcatcgctatggagattgac
tatgcttcctgcaagagactgggatccagttatagagccctgcccaagagcttccagcag
cccagatgcacggggaggaccccgctttgcaaagaggtgcttaatgatacctgggtgtca
tttccatcatggtcagaggattctacctttgtcagctccaaaaagactcagtatgaagaa
catatatatagatgtgaagatgagcgctttgagctcgatgtggttctggagacaaacctc
gccactatccgcgtccttgagactgttcaaaagaggatgtcgcgcatgtcagctgaggaa
caagccaagttcaggctggacaacaccatcggaggctcctccgaggtcattcatcgcaaa
gctatccagaggatatacggagaaaaggctccagacatcatagacggtctgaagacaaac
cctgctgtctctgtacctattgtactgaaaaggctgaaaattaaagaagaggagtggcga
gaggctcagcgtggcttcaataagatctggagggagcagaatgagaagtattacctcaag
tctttagatcaccagggtattaacttcaaacagaacgacacaaaggtgtttcgctccaag
acgctgctcaatgaaattgagagtctgtatgatgagcgacaggagcaggcttcagaagac
aatgccgccccgctctcaggcccccacatgaccctcacgtacgaggacagccaaatacta
gaagatgcggctgctctcatcatccatcacgtcaagaggcagtctggcatccacaaagac
gacaagtacaaaatcaaacagatcatctaccacttcatcccggacatgctgtttgctcga
cgcggtgagctttccgacgtcgaggaggaagaggaggaggagaccgaaccggatgaagat
gggactaaaaagcacaatgggacaacatcgaccaagtccaagcttctctttagccatacg
acagcttcccagcagaagctcagtaactgcgatgatgcctacaacctcttctttgtcaac
aataactggtacatcttcctgaggctgcaccagatcttgtgctcccggctgctgcggatc
tacgggcaggcagaaaaacagatcgaggaagatgccagagagagagagtgggaaagaaat
gttctgggtctgaaaagagagaagaatgacagcccggccgtccagctgcgtttaaaagaa
cccatggaaattgatgttgaagactactactctgccttcttagagatggttcgaaacctt
ctggatggcaacatggagacgtctcaatatgaggaccagctgagggaaatgtttaccatc
catgcctacattgctttcaccatggacaaactcatccagagtatggtcagacagctgcag
catatagtcagtgatgagatctgtgtacaggtgaccgatctctatcttagcgagtgtgcc
aacaaagccactggcgggtcccagtccacccaaacatccagaagcggtggcgaagcggcc
tatcagcgcaaagctgagcagctgatgtctgatgagaactgctttaagttactgttccag
aagtctaaggggagcgtgcagttggctgtggagctgttagacagcgaagaagagaactcg
gatgaaaccgttgaagctgagcgctggcccgactacgtggagcgttatctgaataccaac
tctgcctctccagagctgcgtgagcacctctctcagaagcctgtgtttctacccaggaac
ctcaggcgaattcgtaagtgccagaggggccaggagatgcaaatgagagaagccaaagaa
gcagccaagaaatcttcagaagctggtgaggattcaaagatggagtgcatgtttaagctc
aactcctacaagatggtgtacgtcttcaagtcagaggactacatgtacaggcgtaccgca
caactgagagctcatcagtctcaccagcgagtaagcactcgtctgcatcaacgctttcag
gcgtggctagacaggtggcgaaaagatcacgtgaccagtgacatggctgccaccacttac
aagtggctgatgggggaagcccaggagggcctgctgccctgcagaaccacttgtgaaccc
aagatcatccacttccagaatgtcaacaaatataaagtctcctacagcactacgttgtaa
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