Paramisgurnus dabryanus (large-scale loach): 135778734
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Entry
135778734 CDS
T10799
Name
(RefSeq) neural-cadherin isoform X1
KO
K27892
neural-cadherin
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135778734
Cell adhesion molecules [BR:
pdab04515
]
Cadherins
Cadherin related
135778734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_FAT4_N
CADH_Y-type_LIR
Ig_Shg
Cadherin_CELSR2_9th
Cadherin_pro
EGF
hEGF
EGF_2
Antig_Caf1
Big_9
Laminin_G_3
cEGF
Motif
Other DBs
NCBI-GeneID:
135778734
NCBI-ProteinID:
XP_065145330
LinkDB
All DBs
Position
2:complement(40021294..40322157)
Genome browser
AA seq
2910 aa
AA seq
DB search
MIWTILLPYCVTFVLGNKTDERMPFFHGHVFENSPAGSKVNGLSIPVKRIDPQRWCAKSG
MHLKLQGDRSEDFHVFAHHKRGHILLKTSKLLDREERSDYFLSLALCCQSCASTERVVAE
VASVKVDVLDTNDHEPAFRHSDVKITLDDATALRTVVYTVKAEDMDSGKNAELIYYALPK
NGSFYVVPKTGDILLVDSILGLAHPIKFSVYARDHGWPVRTSHNMDIEISPRQWPAVSQL
DNGLSRKSRSVIEPDKPIIVTVSEDASIGSVIMNLHPVRFQSASFELIHPDPDNSPVTVS
RDSGDLIISRRLDRETQPLVEITVKVQDKRGSEWYTMRVELTVMDVNDNAPEWTMVPFPY
LSVVSPSAPPNSLVYKLQARDGDEGINGEVEYFLSDGGDGRFEVDRKNGYVRTTGLPLQR
DREYLLTVVAADRQGSRSPPAVVSIVAGPRAPQFTNVSYTISIPENTPEGQPFIVTPAVS
FQKQPITYSLLINPSSLFSIHQESGEISLTRSVDYESDQHRYLLLVRASENQDSLSSAAE
VRVIITDENDCVPEFLQSIYSKDGVPETVTTATSLLQVSASDCDSEQNAEITYYTLNPDF
IISAHGTIFPAGPLDYERLNHLYEFVVMAVDKGEVPRTGTATVRLRMANVNDEPPEFSQP
VYRTFVSEDAGPNTLVATVLAKDPDGDGITYKITSGNEEGNFVIDSQKGLIRLRSSPPPK
LQGMKYTLNITATDDNASGGPQSLSATAQVIVGVDDVNNNKPVFEKCLEYKDSASVLENK
PAGTFVLQVHAIDADEGANGKVTYGFMHKDSTVPAFSIDPETGAIATAIKFDRERQREYA
VTVTATDQAADPLIGICQLNIQIMDENDNSPKFENLRYEYFLREDTMIGTSFLRVAAHDD
DYSTNAAITYSMSGEQPEYLRVNPLTGWVYVNQPISQRTYISRQIIATDGGNRSSSVELA
VTITNVKNQPPQWEKDSYEVVIPENTVRDTPVVTIKATSPLGDPRVTYNLEDGLVPESNM
PVRFYLTPNREDGSASILVAEPLDYETTRNFMLRVRAQNVAPVPLAAFTTVHINITDVND
NVPFFTSSIYEASVSEGAEIGTLVLQVSANDLDLGLNGKISYSLLNDRSGDYQYFRIDPE
LGIIHTEAVFDRETKGSYLLEVKSVDSWESSRPGKHGQPNSDTAYVRIFISDVNDNKPVF
SQSVYEVDVDENADKGSTILTVSANDEDEGANAKLRYQITSGNVGGVFDMEPEVGTIFIA
QPLDYEQNKLYKLHVLASDGKWEDYATVIVSVVNKNDEAPVFSVNEYYGSVTEELDGSPV
FVLQVTASDPDKDADQEALRYSLHGQGAESEFIIDEVTGKIYAQRTLDREARAVWRFVVL
ATDEGGEGLTGFTDVIINVWDINDNAPIFACAPDRCHGDVAENSLPGSPVMEMTATDLDD
AAVGQNAVLAYRIVGNAALNGGNSGADVFSINPATGTVLVAMSGLDREQTDTYVLVVEAK
DGGGMTGTATTTIHITDVNDHVPRFLDRSCSVRIPESSEPNTVIIELAAEDADAGENGQL
TFSVVAGDPEQKFYMVSHRQEQRGTLRLKKRLDYERPGEQRFNLTIKVEDMEYSSLLHCT
LEVEDCNDHAPVFIPHFLQLPSIREDVPPGTTLASLVASDLDSGLNREITYSIAPESDPF
HLFSVDQSGLVTVASELDREMVAQHHLVILATDHGMPPMTGTATIQMALLDVNDNGPEFE
AVYAPVVWENVLGPQVLRLNQSSTLLRAVDRDSQENGSPFSFSVPLEYRYSNDFHLQDNG
NDTATITALRAFDRERQKEFLLPVIMTDSGIPPKTVTNTLTITIGDENDHAHTAGLKKVF
INCHRGKLKGRMPTNVLGKVYSPDPDDWDNKTYAFEGHVPNNFVLNKRTGFLIIKENTPP
GSYDFQVLVSDGIWPDVVSSVKVNVRELRDDAIYNSASLRLADISATEFMERRGNLKSRY
ELLGDFLADMLSVGADDVNIFSLAEVRDRTLDVRFYIHNVPFLRAEKVHGYLAAHKQKLQ
SFLQVNVTQVHVDECVDADCRGGGGCTSHLSVTDKPAVVDSGSMALVSVTVEATAVCSCS
AREHFHQGCSVYPRNPCHNGGVCVDTQSGYRCQCPAQFEGPECQQTKHSFHGNGYAWFPP
IRPCFESHLSLEFITEVADGLLLYSGPVSQLQPWEPEDFMAIELIDGTPTLKINHGSGTL
VLQLPGNVNVADRRWHRLDVRSNSKEVRFTLDRCAGATVMEMEGVGSWLTTEDHTSCEVT
GITPNMDKHLNMTQVLQLGGVNENLPYIYPQLQHKHFTGCIRNLIVDSKFYDLGSPADSF
GSTPGCFMTDSSCVNMGFPSCGTRGRCHGEWGSFSCQCIPGYTGHQCEKEVPEYSFDGRS
HVHFQLAFTLPGRHTQVQVLVRTRKHSSSILSLLSKEQNEYVKLEIYQGLLTVFYNLGDG
DFNLTMPSYRVDNGEWHDVHLDRHDNELTLRLDGGGGRREVTGSPGRSREIVIDPAVVML
GNSFPSGHNKSFQGCMRDLRLSGRYIPLEGQTREGVSVVSSQGVSLGCSSDSCRKNQCSP
PFTCVDLWRIHECRCPNGHMVKANSTGKFCVYTLCASRPCHRGTCVAQSPSKFTCHCPEG
YRGRHCEVTLAIYQDDVGLSFSSLFAICICFMALLVLLLGIFLYTRWRSYKGLKEGVYHV
SAHHDGWEDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSVQYSRSRAIHHHPP
SQQQQQHFCQPDPPSRPGTGTTASSSMSSSTTTTTVRRDVPPSRSPAQGQTANTSRAGQL
ARKSLSFSSQDLARYLCEIIRDADQHPETAPFDSLQVFSTEGGGSLAGSLSSFSSAGLEE
GTAGHESLKEWGPRFEKLKALYERAEGSDL
NT seq
8733 nt
NT seq
+upstream
nt +downstream
nt
atgatctggactattttgttgccatattgtgtgacttttgtgttgggaaataagaccgac
gaacgaatgccattctttcacgggcatgtgtttgaaaactctccggctggctccaaagtg
aacgggttgagtattccggtgaagcgcatcgacccgcagagatggtgcgcaaagtctggc
atgcacctgaaactccagggcgacaggagtgaagattttcacgtcttcgcccaccacaaa
cgtggacatatattactaaaaacctctaaactgctggatagagaggagcgctcagattat
ttcctcagtctggcgctgtgctgtcaaagctgcgcctcaaccgagcgcgttgtggccgaa
gttgcgtctgttaaagtggacgtgctcgacactaacgaccacgagcccgcttttcgccac
tcagatgtaaaaataactttagacgacgccacggccctgaggacggtcgtgtacacggtg
aaagcagaggacatggacagcggcaaaaacgccgagcttatatattacgcgctgccgaaa
aacggtagcttctatgttgttcccaagaccggcgatattctcctcgtggactcgatactc
ggtctcgcgcaccctataaagttcagcgtgtatgcgcgagaccacgggtggcccgttcga
accagtcacaacatggatatagagataagtccacgccaatggccagccgtttctcagctc
gataacggactctcgagaaagtctcgttccgtgatagaaccagacaagcccatcattgtc
acagtgtccgaagacgcaagcatcggttcggttataatgaacctgcacccggtgagattt
cagtctgccagctttgagctgatacaccctgacccggataactctccggttaccgtgagt
cgggacagcggagatttgattatatcgaggcggctggaccgagagacgcagccgttagtg
gagataactgtaaaagtgcaagataagcgaggttcagagtggtatacaatgagagtggag
ctgacagtgatggatgtaaatgacaatgctccagaatggacaatggttccgttcccctac
ctgagtgtggtatctcctagtgccccacccaactcattagtctataagcttcaagcccgg
gatggtgatgagggcatcaatggagaggtggagtacttcctatctgatggaggtgatgga
aggtttgaggtggacaggaagaacggctatgtgcggaccacaggtttacccctgcagaga
gatagagaatacttgcttactgtggtggctgctgaccgtcagggcagccgcagcccacct
gccgttgtgtctattgttgcaggtccaagagctccacagttcaccaatgtctcgtataca
atctctattccagagaacacaccagaaggacagcctttcatcgtcactccagcagtgtcc
ttccagaaacagccaataacatacagcctgctcatcaatcccagcagtcttttcagcatc
catcaggagtcgggggagatcagtctgacccgcagtgtagactacgagagcgatcagcac
cgttatctgctgctggtgagggccagtgagaaccaggacagtctcagcagtgctgctgag
gttcgagtaatcatcaccgacgagaatgactgtgtcccagaattcctgcagtccatttac
agcaaggatggtgtccctgagacggtcactacggcaacatcacttctgcaagtttcagct
agtgattgtgattcggaacagaatgctgagatcacgtactacaccctaaatccagatttc
attatttcggcacatggcaccatattcccagcaggccctttggattacgagaggcttaac
cacctgtatgagtttgtggtaatggcagtggataagggcgaggtgccccgcaccggtaca
gccactgtgcgtcttcgtatggccaacgtcaacgatgaacctccggagttctcgcagcct
gtatatcggacctttgtctctgaggatgcaggacccaacactctggtcgccacagttctg
gccaaggatccagatggtgatgggatcacatacaaaattacctcaggcaacgaggagggc
aactttgtcatcgacagtcagaaaggattgatccgtctccgctccagtcctccacctaaa
cttcaaggaatgaaatatactctgaacataacagcaacagatgacaatgcctccggtggt
ccccagtcactctctgccactgcccaggtcattgttggagtagatgatgtcaacaacaac
aagcctgtgtttgaaaagtgtctcgagtataaggacagcgcctcggttttagaaaataag
ccagctgggacattcgtgctacaggttcatgccatagatgctgatgaaggagcaaatgga
aaagtaacatatgggttcatgcataaagacagcactgttcctgcattcagcatcgatcca
gaaacaggtgctattgcaactgcaatcaagtttgatcgtgagaggcagagagagtacgca
gtaacagtgacggccaccgaccaagcggcagacccgctcataggcatctgccaactcaac
atccaaatcatggatgagaatgacaacagccccaaatttgagaacctgcgctatgagtat
ttcctgcgagaggacacaatgatcggtaccagttttctgcgagtggctgcacacgatgat
gattacagcactaatgcagccatcacttactccatgtctggagaacagccagagtacctg
cgagtaaatcccctcacaggctgggtctacgtaaaccaacccatctctcagaggacctac
atcagcaggcagatcatagctacagatggaggaaaccgcagcagttcagttgagctggca
gtcaccattactaacgtgaagaaccagccgccacagtgggagaaggacagctacgaggtt
gtcatacctgaaaacactgtcagagacactccagttgtgactatcaaggccacttctcca
ctgggtgacccaagagtgacttataacttggaggatggattggttccagagagcaacatg
cctgttcgtttctatctaaccccaaatcgtgaagatggctccgcctctatcctagttgca
gagcccctggattatgagaccacccgcaacttcatgctaagggttcgagctcagaacgtg
gctcctgtaccactagcagcattcaccactgttcacataaacatcacagatgtcaatgac
aacgttccattcttcacttcctctatatatgaggcatctgtgtctgaaggagcagagatt
gggactcttgtacttcaggtgtcagccaacgatcttgacctggggctgaatggaaagatc
tcatactccctactgaatgaccgcagtggagattatcagtatttccgcattgatcctgag
cttggcatcatccacacagaggctgtgtttgaccgtgagaccaagggatcctacctgtta
gaggtgaagtcagtggatagctgggagtcgtccaggccggggaagcacgggcagcccaac
tcagatacagcatacgtgcgcattttcatcagtgacgtgaacgataacaagccggtgttt
tcgcagtctgtgtatgaagtcgatgtggatgagaatgccgacaagggctccaccatcctc
actgtcagcgctaatgatgaagatgaaggtgccaatgccaagttacgctaccagattaca
tcaggtaacgtgggaggtgtttttgacatggaacctgaggtgggaaccattttcatcgcc
cagccgctggattatgaacaaaacaagctctataagctgcacgtcttggcctctgatggg
aaatgggaagattatgccactgtaatagtcagcgttgtgaataagaacgatgaagcaccc
gttttctctgtgaacgagtactatggcagtgttactgaggagctggacggttctcctgtg
tttgtgctacaggttacagcctccgacccagacaaggatgctgaccaggaggctttgagg
tactctttgcatggtcaaggtgctgagagtgaatttatcattgatgaggtcactgggaag
atttatgcccagagaacattggaccgtgaggcacgggctgtgtggcgttttgtagtacta
gccactgatgagggcggcgagggcctaacaggattcactgatgtcataatcaatgtttgg
gacataaacgacaacgctcccatttttgcttgtgcacctgacagatgccatggcgatgta
gcagagaactccctgcctggcagtcccgtaatggaaatgactgccactgatttagatgat
gcagctgttggacaaaatgcagttctggcgtacagaattgtgggtaatgccgcgctaaat
ggcggcaacagtggagcagatgtgtttagcatcaaccctgctactggcacagttttagtg
gcaatgtctggtctagacagagagcagactgacacgtatgtcttggtggtggaagcaaaa
gatggtggaggtatgacgggaacagcgacgacaactatacacataacggacgttaatgac
cacgtgccacgttttttggaccgctcgtgctcggttcgtatacctgagagcagtgagccc
aataccgtgatcattgagctggctgccgaggatgcagatgctggggagaatggtcagctg
accttcagcgttgtggccggtgatcccgaacagaagttttacatggtaagtcatcggcag
gagcagcgtgggacccttcgtctcaaaaagcgcctagattatgaaaggcccggtgagcag
cgatttaacctcaccatcaaagtggaggatatggagtattctagcctgcttcactgcacc
ctggaggtagaagactgcaatgaccatgctcctgtcttcattccacactttctacagcta
ccttctatacgagaagatgttcctccaggaactactttggcaagtctggttgccagtgat
ttggactcggggctaaaccgggaaatcacttatagcattgctccagagtccgatccattc
catctgttttctgtggaccaatccgggttagtcactgtggccagtgagttggatcgggaa
atggttgcacagcaccatttggtgatattagcaacagaccacggcatgccacctatgacc
ggcacagcaactatccagatggctctgctagacgtaaatgacaatggcccagagttcgag
gcagtctatgcaccagtagtatgggagaacgttctgggaccacaggtcctgcgactaaac
cagagctccactttactcagagctgtggaccgagattcgcaagagaacggctcacccttt
tctttctctgttcctctggagtatcgatacagcaacgacttccacctgcaggataacggt
aatgacactgccaccatcacggccctgagagcattcgacagagaaagacagaaggagttc
ctactgcccgtcatcatgactgacagcggcattccaccaaagaccgtcactaacaccctc
actattaccattggtgatgaaaatgaccacgcccacacagctggactgaagaaagtgttc
ataaactgtcacagaggtaaattaaaaggcagaatgcccaccaatgtgctgggaaaggtc
tactcaccagatccagatgactgggataacaagacatatgccttcgagggacatgttcct
aataatttcgtcctgaacaagcggacagggttcctcattataaaggaaaacacaccaccc
gggagttatgactttcaggtgctagtctcagatgggatatggccagatgtggtctccagc
gtcaaggtcaacgtgagggagctacgggacgatgccatctacaactccgcctctctgcga
ctagcagacatttccgccaccgagttcatggaacgtcgtggcaatctgaagagcaggtac
gagctgctgggtgacttcttggcagacatgctctctgttggagcagacgacgtcaacatt
ttcagtctggcagaggtgcgggataggactctggatgtgcgcttctacattcacaacgtc
ccatttctcagggccgagaaagtacacggatacctcgctgctcataaacagaaactacaa
tcctttcttcaggtcaacgtgacccaggttcatgtagatgagtgtgtggatgccgactgc
cgaggaggagggggctgtaccagccatctgagtgtgactgacaagccagctgtggtcgac
tcgggcagcatggcgctggtatccgtgaccgtggaagctacagctgtctgcagctgttcg
gcacgtgaacactttcaccagggctgctccgtctatcccagaaacccctgccacaacgga
ggagtctgtgtggacacgcagagtggatacagatgccagtgcccagctcagtttgaagga
cccgagtgccagcagacaaaacacagtttccatggcaacggctatgcttggtttccccct
ataaggccttgcttcgaaagccacctctcactggagttcatcacagaggtggcagatggc
ttgctgctctatagtggacccgtttcccagcttcagccgtgggagccagaagacttcatg
gctatagaactgatcgacggcacccccaccctgaaaatcaaccacggctcgggtacattg
gtcctgcagttgccgggcaacgtgaacgtagcggacagacggtggcacagactggacgtg
agaagcaacagcaaagaggtgcgtttcacacttgaccgttgtgcaggagccacagttatg
gagatggagggtgtaggcagctggcttaccactgaagaccacacttcctgtgaagtcact
gggatcacaccaaatatggacaagcatttgaacatgactcaggtgcttcagctaggggga
gtgaatgagaatctgccatatatctacccacagctccaacacaaacactttaccggctgc
atccgaaaccttatcgtggacagcaagttttatgacctaggttctccagcagactccttt
ggcagtactccgggatgttttatgacagacagtagctgtgtgaatatgggctttccctcc
tgcgggaccaggggccgttgccatggcgagtggggttccttcagctgtcagtgtataccg
gggtacaccgggcatcaatgtgaaaaggaggttccagagtattcgtttgatggaaggagc
catgtacactttcagctggccttcacgctgccaggcaggcacacgcaggttcaggttctg
gttcgaacccgcaaacacagcagctctattctcagcctgctgtccaaagagcaaaatgaa
tatgtcaaattggagatctaccaaggtctgttaaccgtcttctacaaccttggtgatggg
gacttcaacctgacgatgccatcatatcgtgtagacaatggagaatggcatgatgttcat
ttagatcgccatgacaatgagttgaccctgcggctggatggtgggggtggaagacgagag
gtcacgggctcgccgggtcgcagtcgagagattgttatcgatccagctgtggtgatgctg
ggcaactcattcccctcaggacacaacaagagctttcaaggctgtatgcgagacctgaga
ctcagcgggcgatatattcctctggagggtcagactagagagggcgtgtcagtggtcagt
tctcagggtgtgtctttgggctgttcctcggattcctgcaggaaaaaccaatgcagcccc
ccattcacatgtgtggacctgtggagaattcatgaatgcaggtgtccaaatggtcacatg
gtcaaggcaaattccacaggaaaattctgcgtgtacacactttgtgccagccgtccatgt
cacaggggtacttgtgtggcacagtccccctccaaattcacatgccactgtccagagggc
taccgcggccggcactgtgaggtcacgctggccatctaccaggatgacgtgggactcagt
ttcagctcactctttgccatatgcatctgctttatggccctactagtgctgttgttgggg
attttcctgtacacacgctggcgtagctataaggggttgaaggagggagtgtatcacgtg
tccgctcaccatgacggctgggaggacatccgagagaacgttctcaactatgacgaggag
ggcggtggagaggaagaccagaacgcctatgatatggcagagctccaaaagtctctgcag
cccagtccagctcagtcggtgcagtacagccgatcccgagccatccaccaccacccgcct
tctcagcagcagcagcaacacttttgccagcctgaccctccctctagaccgggcactggg
accaccgcgtcctcctccatgtcctccagcaccaccaccaccaccgtccgcagggacgtg
cccccttcccggtcaccagctcaaggccagaccgcaaacactagccgagcaggtcagctg
gcccgcaagagcctgtccttctccagccaggacctggcccgctacctgtgtgaaatcatc
cgcgacgccgaccaacatccagagacggcgccctttgactccctgcaggtcttctctacc
gaagggggcggctcgctggccgggtcgctgagttccttcagctccgctggactggaagag
ggaacggcgggtcacgagagtctgaaagagtgggggccgcgctttgagaagctgaaagcc
ctgtatgaacgggcggagggcagcgacctctga
DBGET
integrated database retrieval system
