Paramisgurnus dabryanus (large-scale loach): 135778796
Help
Entry
135778796 CDS
T10799
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135778796 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_9
LRR_13
LRR_EndoS
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
135778796
NCBI-ProteinID:
XP_065145418
LinkDB
All DBs
Position
2:36014897..36108446
Genome browser
AA seq
1907 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLAAVPDEIYRYNRSLEELLLDANQLRDLPKPFFRLSN
LRKLGLSDNEIQKLPPDVANFTQLVDLDISKNDITEIPENIKFCQALQTVDFSGNPLSRL
PDGFAQLRGLTHLSLNDVSLQSLPNDIGNLSNLLTLELRENLLKSIPTSLSFLVKLEQLD
LGRNVLEVLPETLGALPNLRELWLDGNQLSSLPHELGNLRQLVCLDVSENRLSELPTEIS
GLIALTDLLLYENVLEGLPDSISSLKKLSILKVNQNRMVHLTDSIGECENLTELMLTENL
LQSLPRSLGKLKRLTNLNVDRNRLSSVPAELGGCVGLNVLSLRDNRLGKLPAELGNATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SSSLENLLERSVDETWPTDTNLNRVSVIQFRDDAKNEEEDDEAAEKRQGLQRRATPHPSE
LKVMKNVIEARRNEPYIAKPDGELGSPESEEKRLSGLSNQSHDSQASSSTASATSQDERR
GVNSTGMVPNHGHGQEEEELDEMEVEYTEPTVHFAEEPIIRGGDDEDDDDNEVDEYDGSD
EDSRTPPHPAEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSHDGLSPSAHTPEEE
RDDEEDEEVEDDGVTGSTPFQHRLETAELEDSRLSHMNSSLQPVKGVSFDQVNNLLIEPA
RIEEEEMTLSILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVKVGDKL
LEVNGVDLHGAEHHTAVEALRNSGSAVVMTVLRERMVEPENAITTTPLRPEDDYFPRERR
SSGLPFHLEPGSPAVTTGPCQRLATCLIRNDKGLGFSIAGGKGSTPYRVGDTGIFISRIA
EGGAAHRDNVLEVGDRVISINGVDMTEARHDQAVALLTGTSPTITLLVDRDQASAGGASP
RTRPHSPPPPEPSDSPEQEEGGDELLGNHLSCPMEDEYPIEEVTLIKAGGPLGLSIVGGS
DHASHPFGINEPGVFISKVIPNGLASQCGLRVGDRILEVNSIDLRHATHQEAVKALLSNK
QEIRMLVRRDPSPPGMQEIVINKLPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSS
GAAARDGRLLVGMRILEVSNNSLLGMTHTEAVRVLRASGDSLVMLVCDGFDPKNVAGMEA
SPGIIANPFATGIVRKNSLESISSVDRDMSPEEIDIMQKEVEMARETSQWEREEMEKVER
MRLEREEATRLLEEETENLNTGPLKLDYKTLAALPTTSLQKVNRASPSEPPRTDSPIRDA
GYSPYNSQQSHKSSSAILGREVRYSNIHFTSNGNTKDNSSTRPGAIQPLSRVRPPASPAS
QDGHSSPNPFQHGLSPINSQTTPRAPSPDTFEGFPINIKQVYKAFAAVPHSLAVLEPQQD
LYAQRNNVNAMHPSPEPQLNNEVFEDEGGVPLTPRPSLTADRREYRSLAAVPRLSRPSVE
LKTPPSLNRDSPEQRSFKDRQKYFEIDVKQQTPESKPKPRVSLVGEDDLKKMKEEEAKII
EQRSREYMMDEDEEDDEEDLAKQVADMKARGKVMLDGVEYKVESLGSHGSPSPRQSGTPP
SHYGSSGPSSVDGKGDSQRNSVEDGFRLDQRPNSMTGLIPVYPSESVAPIRTAKAERRLQ
ERLRMESPELAIAMDKELSPAEKRALEAEKRAMWRAARPYGLEEDVRQYEQDLAKRLYQS
RVRASLGSAAAPPTSCSSSSCQPRMKSLEQDALKAQMVIAKSKEGKKRGTLDQLSESPSP
VPTPSPTPMDDISPRTVTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQTPGGTDDLRFMD
DASSNPVSILDAEVPMATTSALEEMALYSNKRKLRQGRRSLETPVPT
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatcccgctgtggcggtgtaaccgtcacgttgagtccgtggataagcgg
cactgctcactcgctgcggtgccggatgagatctaccgctacaaccgcagtctggaggag
ctgcttctggatgctaaccagcttagagatctgcctaagcctttcttcagactgtccaat
ctgcgaaagctgggcttaagtgacaatgagattcagaaactaccacctgacgtggccaac
ttcactcagctggtggacctggacatttctaaaaatgatattacagagatccctgagaac
attaaattctgtcaggccttgcagactgtcgacttcagcggaaacccattgtcaaggttg
cctgatggttttgcacaactcagaggactgactcacttatcactcaatgatgtgtcactg
cagtctctacccaatgacatcggaaatttgtccaaccttttgactcttgagctgagagaa
aatctactgaaatctatacccacctctctttccttcctggttaaactggaacagctggat
ctgggcagaaatgtactggaagttttgcctgaaacacttggggcactgcccaatcttcgt
gagctttggttggacggaaaccagctctcctcgctacctcatgagctggggaacctgcgg
cagctggtttgcttggacgtgtctgagaaccgtctatcagagcttcccacagagatcagc
ggccttattgccctcacagacctgctgctctatgagaacgttctggaaggcttgccggac
agcattagctcgcttaagaagttgtctattttgaaagtgaaccagaaccgcatggttcat
ctcacagactcgattggggagtgtgaaaacctgacagaactcatgttgactgagaatcta
ctacagtctctgcctcgctctcttgggaagcttaaaaggttgaccaacttaaatgtggac
cgaaaccgtttaagcagcgtgcccgctgagctgggaggatgtgtcggtctgaatgtgctc
tctctcagagataaccgattgggtaaactacctgctgagctcggcaatgccactgaatta
cacgtgctggatgtggcaggcaacaggctgcagaacttgccgttcgcattagctaaccta
aacctgaaggccatgtggctggcagaaaaccagtctcagcccatgctgaagttccagaca
gaggatgatgagcggactggagaaaaagttctcacttgttacttgcttccccagcagcct
tcatccagtctcgagaatttgcttgaacggagtgttgatgagacctggccaacagacaca
aatctgaatcgcgtatcagtcattcagttcagggatgatgctaaaaatgaagaggaagat
gatgaggcagcagagaagaggcagggtcttcagaggagagccacgccacatcccagcgag
ttgaaggtgatgaagaacgtaattgaagccagaagaaatgagccttacatagccaagcca
gacggagagctggggtccccagaatctgaggaaaagcggttaagtgggctgtccaatcaa
agtcatgattctcaggcatccagtagcactgcctcagcaacttctcaggatgagaggcgg
ggagtgaacagtacagggatggtgcccaatcatggacatggtcaagaggaggaggagctt
gatgagatggaggtggaatatactgagcccactgtgcactttgctgaagagcccatcatc
cgtggtggcgatgatgaagacgacgatgacaacgaagttgatgaatacgatgggagcgat
gaggactctcgaacgcctccccaccctgccgagaaacagcggcttatacgtaaagacacg
ccacactacaaaaagcacttcaagatcaccaagctgcccaagccagaggctgttgccgcc
ctgctgcaaggtttcagccatgacggcctctcaccttctgctcacactcctgaggaagag
agagatgatgaggaggacgaagaagtggaggacgatggagtaacaggcagtactccattt
cagcacagactagaaacagctgaactagaagacagcaggctgagtcatatgaactcgtct
ttgcagcctgtgaagggggtgtcatttgatcaagtcaataatctgctgattgagcctgct
cgaattgaggaggaagagatgaccctgtccattttaaggcagactggtggtttaggcatc
agcatagcaggggggaaaggatctacaccttacaagggtgatgatgagggtatcttcatc
tctagagtttcagaagagggccctgcagcccgtgctggggtcaaagtgggagacaaactc
cttgaggtaaacggtgtggacctgcacggagcagagcatcacacagctgtcgaggccctg
cgtaactcggggtcagctgtggttatgactgtcctgcgggaacgcatggtggaaccggag
aatgccatcaccaccacgccactacgacccgaagatgactatttccctcgggagagacgg
tccagtgggcttcctttccatctagagcctggatcacccgctgttaccactggaccctgt
cagcgactagccacctgtctgatccgcaacgataaaggtttagggttcagtattgctgga
gggaaagggtcaacaccgtacagagtaggagacacgggaatcttcatctctcgtattgct
gaaggaggtgctgcacacagagacaacgtcttagaagtgggagacagagtcatatcaatc
aatggtgtagacatgacagaggccaggcatgaccaggcagtagcgctgcttactggcacc
tcccccaccatcaccctactggtcgatcgggaccaggccagtgcagggggcgcctcccct
cgaacacgccctcattccccccctcctccagagccgtctgactcacctgagcaagaggag
ggaggtgatgagcttctgggaaaccatctaagctgccccatggaagatgagtaccccatt
gaggaagtgacactgattaaagcaggcggtccactgggtttgagcattgttgggggtagc
gaccatgccagccacccctttggaatcaatgagccaggagtgttcatatcaaaggttatt
cctaatggattggcctctcagtgtgggttacgtgtgggtgatcgtattttggaggtaaac
tccattgacctgcgacatgccacgcatcaggaagctgtaaaggccctgctctccaacaaa
caggagattcgtatgctagtgcgcagagatccctcgccccctggcatgcaggagattgtc
attaacaagctgcctggagaaaagctaggcatcagcattaggggcggagctaaagggcat
gcaggcaacccctttgaccccacagatgaaggcatctttatttccaaggtgagctccagt
ggcgcagcagcacgagatgggcggctgctggtaggcatgcgtattcttgaggtgagcaac
aacagtctgctgggtatgacacacacggaggcagtgagggtcctgcgtgcttccggtgat
tccctggtcatgcttgtgtgcgatggctttgaccccaaaaatgttgctgggatggaggca
tcccctggcattattgcaaatcctttcgccaccggtattgttcgtaagaacagcctggaa
agcatctcatcagtagacagagacatgagtcctgaagaaattgacattatgcagaaggag
gtggagatggcaagagagacatcacaatgggaacgggaggagatggaaaaagtggagcgt
atgcgcttggagcgtgaggaggcaactcgcttgctggaggaggaaactgagaatttgaac
actggaccattgaaactggactacaagacactggcagcactacctacaactagtctacag
aaagttaacagagcgtctccatctgagcctcccaggactgacagtcctatccgagatgcc
gggtattctccatacaactcacagcagtctcacaaatcttcctctgcgattcttggaaga
gaggttcgatattccaacattcatttcacctcaaatggaaacaccaaggataattcatca
actagacctggtgccatccagcctctctctcgggttcgaccacctgcgtcaccagccagt
caggatggccacagcagtcccaatcctttccagcatggtctctctcccatcaactcccag
accactcctcgtgccccatcccctgacacatttgagggattccccatcaatatcaagcag
gtatataaggccttcgctgctgtgcctcactccctggctgtactggaaccccaacaggat
ctgtatgctcagaggaacaacgtcaatgcaatgcacccatctccagagcctcagttgaat
aatgaggtgtttgaggatgagggtggggttcctcttacccctcgtccctcccttactgct
gatcgccgcgagtacaggagcctggcagctgtgccacgcctgtctcgcccctcagtggag
ttgaagacgcccccctcattgaacagagacagcccagaacagcgctccttcaaagacaga
cagaagtatttcgagattgatgtgaagcaacagactccagagagtaaacccaaacctcgg
gtgtcactggtgggagaggatgacttgaagaaaatgaaagaggaagaagcaaagataatt
gaacagaggtctcgagagtatatgatggatgaagatgaggaggatgatgaggaagatctg
gctaagcaagtggcagatatgaaggctcgtggaaaggttatgctagatggtgtggaatac
aaggtcgaaagcttaggaagtcacggttccccatctccgaggcagagcggcacacctccc
agccactatggcagttcaggtccctcctctgttgatggtaaaggagactcccagcggaat
tctgtggaagatggatttagattggaccagagacctaattcgatgacaggtttgatacca
gtttacccaagtgaatctgtagcccccattcggactgcaaaagcagagcgcagacttcaa
gagcgactacgcatggaaagcccggagcttgccatcgctatggacaaagagttgtcgcct
gctgaaaaaagagccctggaggcagaaaagagggccatgtggagagcagccaggccatat
ggtctagaggaggacgtaaggcagtatgagcaagacctggctaagcggctctaccaatcc
cgtgtgagggcatcgctaggcagtgctgcagcccctcccacttcctgctcctcctcttcc
tgtcagcccaggatgaagtctctagagcaagacgctctgaaggctcagatggtcatagcc
aagtctaaagaggggaagaagcgtggaaccctggatcagctgtcagagtcgccatctcct
gtccccacaccctctcctacgcccatggacgatatcagtccaaggacagtgacttcacca
ggcagactgtccctgtcagaaaagaagtttgactaccgacaatttgctgccattccttct
tccaaacccgtttacgacattcagacccctgggggaacagatgacttgcgcttcatggat
gatgcctccagtaatcctgtgtctattttagatgcagaagttcctatggccaccacatcg
gctctagaagagatggctctctacagtaataagcgcaaactacgacagggtcgccgcagc
ctggagaccccagtgcccacataa
DBGET
integrated database retrieval system
