Paramisgurnus dabryanus (large-scale loach): 135778811
Help
Entry
135778811 CDS
T10799
Symbol
shha
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
135778811 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdab01002
]
135778811 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pdab00536
]
135778811 (shha)
Peptidases and inhibitors [BR:
pdab01002
]
Cysteine peptidases
Family C46: hedgehog family
135778811 (shha)
Glycosaminoglycan binding proteins [BR:
pdab00536
]
Heparan sulfate / Heparin
Morphogens
135778811 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DHQS
Vint
DUF7764
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
135778811
NCBI-ProteinID:
XP_065145456
LinkDB
All DBs
Position
2:35803439..35810919
Genome browser
AA seq
418 aa
AA seq
DB search
MRLMTRLVLVSFLSLSLVLSGLACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSALVALKDGRQKAVKDLRPGDKVLAADSAGNLVYSDFIM
FTDRDTTTRRVFYVIETKDAAEKIMLTAAHLLFVLDNSTDDLHTMTAAFASSVRPGQKVM
VVDDSGQLKSVIVERIYTEEQQGSFAPVTAHGTIVVDRVLASCYAVIEDHSLAHLAFAPV
RLFYHVSSFIFPKYFTSKSNATLQHEGVHWYSKRLYQLGTWLLDSHKLHPLGMSVNSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttatgacgagactggtgctggtgtcttttctcagtctgtccttggtgctctcc
ggactggcctgtggtcctggcagaggctacggcagaagaagacatccgaagaagctgaca
cctctcgcatacaagcagtttatacctaatgtcgcggagaagaccttaggagccagcggc
agatatgagggcaagataacccgcaattcagagagatttaaagaacttactccaaattac
aatcccgacattatctttaaggatgaggagaacacaggcgcggacagactcatgacacag
agatgcaaagataagctgaattcactggccatctctgtaatgaaccagtggccaggggtt
aagctgcgtgtaaccgaaggctgggatgaagatggtcaccattttgaggaatcactccat
tatgagggaagagctgttgatatcactacctctgaccgagacaagagcaaatatgggact
ctctcacggttagcagtggaggctggatttgactgggtctattacgagtccaaagctcac
atccattgctctgtcaaagcagaaaactcagttgctgctaagtccggaggctgtttccca
ggttcggctttggtcgcattaaaagacgggaggcagaaggccgtgaaggacctgagaccc
ggtgacaaggtgctggcggcggacagcgcgggaaacctcgtctacagcgacttcatcatg
ttcacagacagagacacgacgacgcgacgtgtgttttacgtcatagaaacaaaagacgcc
gccgaaaagatcatgctcaccgcggctcaccttctttttgtcctcgacaactccacggat
gatctccacaccatgaccgccgcctttgccagctctgtcagacccggacaaaaggtgatg
gttgttgatgatagcggtcaacttaaatctgtcatcgtggagcggatatacacggaggag
cagcagggctcgttcgcaccagtgaccgcccatggaaccattgtggtcgaccgagtactg
gcgtcctgttacgccgtcatagaagaccacagtctcgcacatttggccttcgcgccagtt
aggctgttttatcacgtgtcttctttcatatttcctaaatacttcaccagtaagtccaat
gcgactttacaacatgagggagttcactggtactctaaacgcctttatcagttgggaacg
tggcttttggacagccacaagcttcatcctttggggatgtcagtaaactcaagctga
DBGET
integrated database retrieval system
