Paramisgurnus dabryanus (large-scale loach): 135778989
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Entry
135778989 CDS
T10799
Symbol
smarcc1b
Name
(RefSeq) SWI/SNF complex subunit SMARCC1b isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135778989 (smarcc1b)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135778989 (smarcc1b)
PBAF complex
135778989 (smarcc1b)
GBAF(ncBAF) complex
135778989 (smarcc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
135778989
NCBI-ProteinID:
XP_065145696
LinkDB
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Position
Unknown
AA seq
945 aa
AA seq
DB search
MATHSLGSTAAAGPGTNQTSCSSSLSRKTDGGPCCKFWESPEIISQMETVRSWIGKHYKK
YVQADAPSSKSLSGLVIQLLQFQEDSFGRRANNPDFTKLPAKCFLNMRPGGALCHILGSV
YKFKTEQGWRRFDLQNPSRVDRNVEMFISIENTLIQNNLLSRPVVYLSPDFEQKQTIKLK
DIILRHQGTVTEDRSQATHQIYPNPSTADEEEWFRPVMRLDRQVMVHWGMCPDSYDSVVS
ASDVNGEVEEPPNPDKCWKVHAKWVFDTDTFNEWMNEEDYAVNENGNSVSFRRRIYQTEE
KEPKFWKKRRRSLSPSSSESRKKGGKKGSSYKKRGQPEDPEPEEDLTKDMEDPTPVPNME
EVILPKNVNLKKDSENTPVKGGIMADLDDQEEDLLSGVRDEDEQREFSRGMEGEESATEQ
IHHIIIPTYTSWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTSCRRNLTGDVCALIRVHSLLEQWGLINYQVDAESRPLPMGPPPTPHFNVLTDTPSG
LVPLQHRPLQVSASQHMLHFPEKSTEKPSDLQNFGLRIDIYTKKHPKSKGASAGREWTEQ
ETLLLLEALEMYKDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLENSEASMGPLAYQPV
PFSQSGNPVMSTVAFLASVVDPRVASAAARAALEEFSRAREGAPTDIFTIAFQKSQRVGH
NLDSAFALQSGGITGLDQDPEKTDGSGFEKMNIESEHHDKPEGDSLLVEGERVKNEEKDE
SEGERGEESAAEESFEMGHAQGEGEDLRRPVELELVEANIATAAAAALASAASKAKHLAA
VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQNFHMEQ
VKYAEMKAQQNMEQQQQQAGCSVGSAAAGQMMGARHTGAPNGMCE
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggccactcattctttaggatctactgctgctgctggaccaggtacaaaccaaactagc
tgtagctcttcgttgagtcgaaaaaccgatggcggaccctgctgtaaattctgggaaagc
ccagaaatcatctctcagatggaaacggtccgcagttggattggaaagcattataaaaag
tatgtgcaggccgatgctccatccagcaagtctctgtccggtctggtcatccaactgttg
cagtttcaggaggactcttttggacgcagagcaaataacccagacttcacaaaacttcct
gcaaagtgttttcttaacatgaggccaggtggtgccctgtgccatattctgggatcagtg
tacaagtttaagactgaacagggctggagacgcttcgatctgcagaacccatccagagtg
gatcgtaatgtagaaatgttcatctccattgagaatacactgatacagaataatctatta
agcagacctgtggtgtacctgtctcccgattttgagcaaaagcaaaccataaagcttaaa
gacataatcttgcggcatcagggcacagttacagaggatcggtcacaagccactcaccaa
atatacccaaacccctcaacagcagatgaagaagagtggtttagaccagtcatgagatta
gatcggcaggtgatggtacactggggcatgtgtccagacagctatgactctgttgtgtca
gcaagtgatgtgaatggagaagtggaggaacctcccaacccagacaagtgctggaaggtt
catgccaaatgggtttttgacaccgacacttttaatgagtggatgaatgaagaagactat
gcggtaaatgagaatgggaatagtgtgagtttccggcgtcgtatctaccaaaccgaagag
aaggaaccgaaattttggaagaagcggcggcgttccctgtctccatcctcctctgagtct
aggaaaaagggaggaaaaaagggcagctcgtataaaaagcgtggccaaccggaagacccg
gagccagaggaagaccttactaaagacatggaggatccaacacctgtacctaacatggag
gaggtcatactacctaaaaatgtgaacctgaaaaaagacagtgaaaatactccagttaaa
ggagggatcatggcagatttggatgaccaggaagaggatctgctctccggtgtcagagat
gaggacgagcagagagagtttagtcgtgggatggagggggaggagagtgctacagaacaa
atacatcacatcattatccccacctatacctcctggtttgactacaactgtattcaccaa
atagaaagacgcgcacttcctgagttcttcaatgggaaaaataaatccaaaacaccagaa
atatatcttgcctaccgaaacttcatgattgacacataccgactaaaccctcaagagtat
cttacctcaacgtcctgcagaagaaacctgacaggagatgtttgtgcacttataagagtt
cattctttattggagcagtggggtttaataaattatcaggtagatgcagagagtcgaccc
ctacctatgggcccaccgccaacaccacactttaatgttctcacagacacgccttcagga
cttgtaccgctgcagcacagacctttacaggtatcagcttctcagcatatgttgcatttc
ccagaaaagtccacagaaaagccctctgacctccagaattttggtctgcggattgacatt
tatactaagaaacatcctaagagtaaaggagcaagtgcaggaagagaatggacagaacag
gaaacactgttgcttttagaggctttagaaatgtataaagacgactggaataaggtgtct
gaacacgtgggtagccgtacacaggacgactgtattcttcatttcctgcggttgcccata
gaggacccatacctggagaactccgaagcatctatgggccctctagcctatcagccggtc
ccgttcagccaatcagggaaccccgtaatgagcactgttgctttcctggcatctgtggtt
gaccctcgagttgcttctgctgctgcaagggcggctttggaggagttctcgagagcaaga
gagggtgcaccgactgacatattcaccattgcctttcaaaagtcacagagagtggggcat
aatttagattctgcattcgcactgcagtcaggtggcatcacaggacttgatcaagatcca
gaaaagactgatggaagtggtttcgaaaaaatgaacattgaatctgagcaccatgacaag
cctgagggtgacagcctcctggtagaaggagaacgtgtgaagaacgaggagaaagatgag
agtgaaggagaaagaggagaggaaagcgcagcagaggagagttttgaaatgggccacgcc
caaggagaaggggaagacttgagaagaccggtggagcttgaattggtggaggcaaacatt
gccacagcagctgctgcagcactggcatctgcagcaagcaaagcaaagcacttggctgca
gtagaagagaggaagattaagtctctggtggctctgctggttgaaactcagatgaaaaag
ttggagatcaaactgagacattttgaagagctagagaccatcatggaccgagaaaaagaa
gctttggagcagcagagacagcagttattgtctgagaggcagaacttccacatggagcag
gtgaaatatgccgaaatgaaggcacagcagaatatggagcagcagcagcaacaagcaggt
tgttcggtgggcagcgctgccgcagggcagatgatgggcgctcgacacactggggctccc
aacggcatgtgtgagtaa
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