Paramisgurnus dabryanus (large-scale loach): 135779917
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Entry
135779917 CDS
T10799
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135779917 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135779917 (arid1ab)
03021 Transcription machinery [BR:
pdab03021
]
135779917 (arid1ab)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135779917 (arid1ab)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Helix-turn-helix
ARID
135779917 (arid1ab)
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135779917 (arid1ab)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135779917 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
135779917
NCBI-ProteinID:
XP_065146896
LinkDB
All DBs
Position
19:complement(34761974..34829648)
Genome browser
AA seq
2237 aa
AA seq
DB search
MAAQVATLNTSPPVELKKPEREPQDESVLGEKQPENKEPRADGGSPGQKELHDGADVGNA
AGGGGAGGDPDMKNGNGNPSRVNNNQNDSGGPEANSHPGMAHHHSGAFPPPPYVYNRAPF
NQHGGQQSPSMAGPAMMDPYPPSSHEHGYPNHFNNYSPFPNRTPYHQGQGYGMNSPRNSQ
PPASGGQPGKQPPPGGTTPMVASYNNQRYNMGTPQPTSTPTLNQLLTSPSSTRTYQNYPP
SDYSSQDGVAKGPGDMGSGSQYGGGHSGWQQRSHHPPPMSPGNTGQAINRSQPPGPMDQV
GKIRGQHYGAGNPYSQQQGPAPGSQQGPPYPGQAYGPAGPQRFPIGMQGRTPGSMSGMQY
GQQIGFGQHGPGGYSQNQGGYYGQQGSSSHGGPQQSSYPQQPPSGPASQSPYTQQPPGPP
HGQGGPPYAQPQGSHGPPQGQPSYSQTPQSGQPPYPQSQGPTQSQSASQGQQGPQSQPGY
SQPPSGPPQQQGPSQQQQGPQHTQPPSSAPPQSSQQPTGQGQPSPYSQTPPQQQSPFQRF
PPPPPQQELSQDSFSSQSSAPSSNQPMVSSKSGPEDSMQGRPSSLPDLSGSIDDLPTGTD
GALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPVSGPASRTGPL
SPGTLPGNQMPPRPSSVQSDGMLHTSMGQDRVYMRNPQMPYGSPQQGSTLSPRQSSGGQM
HAGMGSFPQNNSMGNYGPQSAQYGQQGFPRPAYAGMPNANYTGGPGMSSSMNPMAGQGGG
GPYGGMPPGRMGPGQMGARPYGPGMGPNMGGMPTQVTSGMCPPPGMNRKPQDPATAGMHH
GPSNSIHRPPGYTNMGQSMMGAGSPYAPPMNSMQNMMNQAGPYPVPGNMANNSAGMAPSP
EFGMEKLNQPQKLNNKVEGTPKTESKKKSSSSTTTNEKITRLYELGPEPERKMWVDRYLA
FAEEKAMGMTNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAA
SSLKKQYIQCLYAFECKIERGEDPPPDFFNTDPKKNQTKVQPPSPAGSGSLQGPQTPQST
SSSMAEGGDLKPPTPASTPHSQMPPMPGSRSSVNLQDPFADGGDPAFSRRNSVTPNSGYQ
PVMGGPDVMGRLGPYEPNKDPFGGMRKAGEQFMTPGQGPNSGMGEPYNRGPPGPMQMGQR
QQYPYGPGYDRRPDSGMCPDGNMGPQPNMMPSGADAGMYSPNRPPQQQRHDSYGNQYPGQ
GAPPSGSYPNQQPGMYPQQQPNFTQKRPVDGVYGPPAKRHEGDIYPYTSQQQGPQAPGGP
QSQPDMYNQYNTYPGSDRRPPGSQSQFPFGFGRDRGPNAGGPNAQPSMQPQMMGSSMSGP
MPTVPDGPQGPMWAGRNEMNYPNYHNRQGPPGAISQTSGYHTMNRPDDMIPPDQRVNHEG
PWPGHVNQRQSPYGQGPTGPPMSRTLQPNYQTSQNHIPQVSSPVPMPRPIENRTSPSKVP
YMHPGMKIQKAGPPVPASHIAQPPVHPPLIRRDVAFPPGSVESSQPILKPRRRLTMKDIG
TPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFNLNQLPGFLELVVEYFRRCLI
EIFGILKEYEVGDPGQRTLVDPNAVDPEMSDEEVPEAEQMEEEDEDEDEDDDVENSTVQM
PQVQVKQEKEEFTQIQKPSDRLEQVEREDEDTSCKPLPKSPTPQQEISGSQERPKQASKF
DKLPIKILRKKDLFVIGRTSKLGRRQAFDSGLIHWSVGGGDTTEHIQTHFESKMELLKQR
KRKPVNIGPRKKVAEAVTDDAEKTIEEQLTPQAQPQPSTNQSSEDKNATAASTSTSITAT
IDDVLSARQGSLTEEAVRGKPDNIDREKSKFLFGMDLAHHSRNIKILEDEPHSKDETPLC
TLSDWQDALARRCICVSNVVRSLSFVPGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAP
VTYEKEEEEDEGVSCERDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLLDGL
LHWAVCPSAEAIDPFPTLGLNGTLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLY
GSLVRMVGERKVPVCREMAVVLLANLAQGDSVAARAIAVQKGSVGNLLGFLEDSLAATQF
QQSQGSLLHLQGTHFEPTSVDMMRRAARALHAFAKVEENHSEFTLYESRLLDISVSPLMN
SLVSHVICDVLFLIGQS
NT seq
6714 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccactctcaacactagtccgcccgtcgaactcaaaaagccggag
cgggagccgcaggacgagtcggtgcttggagagaagcagccggaaaacaaggagccccgc
gcggacggtggatccccgggccagaaggagctgcacgacggggccgatgtgggaaacgct
gctgggggaggaggagcgggaggcgaccctgacatgaagaacggcaacgggaacccgtcc
agggtaaacaataaccagaatgattctggcggacctgaagcgaacagccaccccgggatg
gctcaccaccactcgggtgctttccctccacctccgtacgtttataaccgggcccctttt
aatcaacatggcggacaacaaagccctagcatggcagggccggcgatgatggacccatac
ccgcccagttcacacgagcacggctaccccaaccactttaacaactacagccccttcccg
aaccggacgccgtaccaccagggccaagggtacggcatgaattccccgcgaaacagccaa
ccgccggcgtctggggggcagccaggcaagcagccgccgccaggaggaactacgccgatg
gtcgcttcttacaacaatcagagatataacatgggaacccctcagcccacctccaccccg
actttaaaccagctactgacctctcccagttccaccaggacctaccaaaactacccaccc
agtgattacagtagtcaggatggggttgccaagggaccgggggatatgggcagcggtagt
cagtatggtgggggccactcgggctggcaacaaagaagccatcaccctcctcccatgagc
ccgggaaacactggacaagccatcaacagaagccagcctcctggccccatggatcaggtg
ggaaagattcgagggcagcactatggcgcaggaaacccctattcccagcagcagggccct
gccccaggctcccagcagggacctccctacccagggcaagcttatggacctgcagggccc
caaagattccccataggcatgcagggacgaacccctggaagcatgagcggaatgcaatac
ggacagcagattggctttggacaacatgggccaggtggttatagccagaaccaaggtggt
tactatggacaacagggatcttcctcccacggaggaccccagcaatcttcatacccccag
cagcccccatctggaccagcctctcagtctccatatacccagcaacccccaggtcctccc
catggtcagggtgggcccccttacgctcagcctcagggctcccatggtccccctcagggc
caaccttcgtattctcaaactccacagtcaggtcagccgccctatcctcagtcccaaggt
cctactcagtcacagagtgcttctcagggccagcaagggcctcagtcacagcctggatat
tctcaaccaccttctggtccacctcaacaacagggtccctctcaacagcagcagggtcca
caacatacacagccgcccagctcggcacccccacagtcatcccaacaacctacgggccag
ggccagccctcaccctactctcagacccctccacagcaacagtcacccttccagcgcttt
ccaccaccaccaccacagcaggagctgtctcaagattctttcagttcccagtcgtctgct
ccctcctccaaccaacccatggtgtccagtaagagcggcccagaggacagtatgcaggga
cgaccttccagccttcctgatctgtcaggctccatcgatgatctccccacaggcactgat
ggggctttgagtcccggcgtgagcacatcaggggtatccagcagtcagggtgagcagagc
aacccggcacagtctcccttttccccacacacctctcctcacctgccaggcatccgcggc
ccgtcgccatcacccgtgggctcacctgtcagcggtcctgcctcacgtacaggacccctc
tcacccggaaccttgccaggaaaccaaatgccccccaggccctctagtgttcagtcagat
ggtatgctgcatacctcaatgggtcaggatagagtatatatgcgaaaccctcagatgcca
tacggctctcctcaacaaggatcgactttatcaccacggcaatcatctggaggccaaatg
catgctgggatgggttcttttccgcaaaacaactccatgggcaattacggaccacagagc
gctcagtatgggcaacaaggtttcccaaggccagcttatgcaggaatgccaaatgcgaac
tacaccggtggtcctggaatgagcagctccatgaatcctatggcgggccagggtggaggc
ggtccgtatggaggtatgcctcccgggcgtatgggtccggggcagatgggtgcgagacct
tacggcccaggcatgggccccaacatggggggtatgcccactcaggtgacatctgggatg
tgtccgccacctggaatgaacaggaagccgcaagatcctgctacagcgggcatgcaccac
ggcccatctaattcaatacacaggccacctggttataccaacatgggccaaagcatgatg
ggagctgggtctccatatgccccacccatgaacagcatgcagaacatgatgaaccaagcg
ggaccatacccagtacctggcaacatggccaataactctgcaggcatggcccccagtcca
gagtttggcatggaaaagctcaaccagcctcaaaagttgaataacaaagtggaagggact
cctaagaccgaatcgaaaaagaagtccagttcatctaccaccactaatgagaaaataacc
cgtctgtacgagctgggaccagaaccagagaggaaaatgtgggtggaccgttatttggca
tttgccgaagagaaagccatgggcatgaccaatctacccgcagtgggccgcaagcccctt
gacctcttccgcctctatgtgtctgtcaaagagattggcggcctcactcaggtgaacaag
aacaaaaagtggagggagttagccacaaacctgaatgtgggcacatctagcagtgccgcc
agctctttgaagaagcagtacattcagtgtctctatgcctttgaatgcaagattgagcga
ggggaagacccaccacctgacttcttcaacaccgaccctaaaaagaaccagaccaaagtc
cagcccccatcaccagctggatcggggtctttacagggtcctcagacacctcagtcgacc
agcagctccatggctgagggtggagatctgaagccaccgacacctgcatcaacacctcac
agccagatgccccccatgcctggttctaggagcagcgtgaatttacaggatccttttgcg
gacggtggggacccagcgttttccaggcgcaactctgtgaccccgaattcaggttatcag
cctgttatgggtggaccagatgtgatgggccgcttggggccttacgagcccaataaggac
ccttttggtggcatgagaaaagcgggtgagcagttcatgactccaggtcaaggcccaaat
agtggcatgggtgaaccatataacagaggccctccaggacctatgcagatgggtcaaaga
caacagtatccctatggtccaggatatgacaggagaccagattcgggtatgtgcccagat
ggtaacatgggtccacaacctaacatgatgccatctggtgcagatgcagggatgtactca
ccgaaccggcctccacagcagcagaggcatgattcatacggaaatcaataccctggccaa
ggtgctccccctagtggatcatatcccaaccagcagccaggaatgtacccacaacagcaa
ccgaatttcacacagaagaggccagttgatggtgtttatgggcctcctgcaaagcgtcat
gaaggggacatatacccttataccagtcagcaacaaggaccccaagccccaggtggaccg
cagtcccaaccagatatgtacaaccagtataacacctatccaggctcagacagacgcccc
cctggctcacagagccaatttccttttggttttgggcgagatcgagggcctaacgcgggt
ggccctaacgctcagccctccatgcaaccgcagatgatgggtagctccatgagtggcccc
atgccgacagtccctgatggaccccaaggtcccatgtgggcaggccgtaatgagatgaac
taccctaactatcataatcgtcaggggccccctggtgccatctctcaaacctcgggctac
cataccatgaatcggcccgacgacatgatacctccggaccaacgcgtgaatcacgagggg
ccgtggcctggccatgttaaccagcggcaatccccatatgggcaaggacctactgggcca
ccaatgtccagaactctgcagcccaactatcaaacctcccagaaccacattccacaagtt
tccagccctgttcccatgccaagaccaattgagaaccgaacctcacccagcaaggtgcca
tacatgcacccgggaatgaaaattcagaaggctggacccccagttccagcttcacacatt
gcccaacctccagtgcaccctcctttgatacggagagatgtggcattcccacctggttca
gtagagtcctcgcagccaatcctgaaacctcgtcgtcggctaacgatgaaagatattgga
acaccagaggcctggagagtcatgatgtcccttaaatcaggcttgttagcagagagtact
tgggccttagacaccattaatattcttctatatgatgacaatagcatttccaccttcaat
ctgaaccagcttcctggcttccttgagctcgttgtcgaatacttccgaaggtgcctcatt
gagatcttcggcatcttgaaagagtatgaggttggagatcctggccaacgtaccctggtc
gacccgaatgccgttgaccccgagatgtctgatgaggaggtgccggaggcagaacagatg
gaagaggaagacgaggacgaagatgaggatgatgatgttgaaaacagtactgtgcagatg
ccacaggttcaggtcaagcaggagaaagaggagttcacccagatccaaaaacccagtgac
agacttgagcaagtagagagggaagatgaggacacttcatgtaaacctctccctaaatca
cctaccccacagcaagaaataagtggctcccaagagaggccaaagcaggctagcaagttc
gacaagctccctattaagatattgaggaagaaagacctgtttgtaattggccgcaccagt
aaattgggccggcgacaagctttcgatagcggtctgatccattggagcgtgggtggtgga
gatactacagagcacatacagacccatttcgagagcaagatggaacttttgaagcagcgg
aaacggaagccggtgaatatagggccacgtaaaaaagtagcggaagcggttacggacgat
gctgaaaaaacgattgaagaacagctgacaccgcaagcgcaacctcagccgtccacaaat
caatcatcagaggacaaaaacgccacagcagctagcacgtcaacgagtataacggccacc
attgatgacgtgctgtcagctcggcaaggttccttgaccgaggaagcagtcagaggcaag
ccggataatatcgacagagagaaaagcaagtttctcttcggcatggaccttgcacatcat
agtcgtaacatcaagatcttggaagacgagccacatagcaaggatgagacgccactctgc
acgctttcagattggcaggatgcccttgcccgccgttgcatctgtgtttccaacgttgtt
cgcagcctttccttcgtccctggcaatgacctggaaatgtcaaagcatccaggactttta
ctgttactaggcaggctggtgctgttgcaccatcggcatcctgaacgcaagcaggccccg
gtcacctatgaaaaagaggaagaggaggatgaaggtgttagttgcgagcgagacgagtgg
tggtgggactgcctggaggttctgcgggaaaactgcttggtcacgttagccaacatctca
ggccagctggacctttccatttaccctgaaagtatttgcttgcccctattggatggcctg
ctccactgggctgtttgcccttcggctgaagccatcgaccccttccctacgctaggacta
aacggaacgctgtctccccagagactggtccttgaaaccctgagtaaacttagcatccag
gataacaacgttgacctcattctggctacgccaccttttagccgtttggagaagctctac
ggctccctcgtgcgcatggtcggtgaacgcaaagtgcccgtttgccgggagatggcagtg
gtgcttctggctaacctcgcgcagggcgacagcgtcgcggcccgggctattgcagtgcag
aagggcagcgtgggaaaccttctcggttttctggaggacagtcttgcggccactcagttt
caacaaagtcagggctcgttgctgcacttacaaggcacgcactttgagcctactagtgtg
gacatgatgcggcgggcagctcgtgccctgcacgcctttgccaaagtggaagagaaccac
tcagaattcacgctgtacgagtcacggctactggacatatctgtatccccacttatgaac
tctttggtgtcccacgtaatctgcgacgtactgtttctgatcggccagtcgtga
DBGET
integrated database retrieval system
