KEGG   Paramisgurnus dabryanus (large-scale loach): 135779955
Entry
135779955         CDS       T10799                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A-like isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    135779955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdab04121]
    135779955
   03036 Chromosome and associated proteins [BR:pdab03036]
    135779955
Enzymes [BR:pdab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     135779955
Ubiquitin system [BR:pdab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    135779955
Chromosome and associated proteins [BR:pdab03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     135779955
    Noncanonical PRC1 (PRC1.1)
     135779955
    Noncanonical PRC1 (PRC1.3/1.5)
     135779955
    Noncanonical PRC1 (PRC1.6)
     135779955
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-Nse zf-RING_5 zf-RING_6 RING_XB3-XBAT31 zf-rbx1 zf-RING_4 zf-UDP Sina_RING zf-C3HC4_5 Zn_ribbon_Top1 Lar_restr_allev zf-ANAPC11 TRAF3_RING
Other DBs
NCBI-GeneID: 135779955
NCBI-ProteinID: XP_065146963
LinkDB
Position
19:32623149..32637472
AA seq 371 aa
MSFDFTESVLGSVNFHIAPCLCEVMMANPVSIQTLSKTWELSLYELHRTPQEALMDSTEI
AVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSECIVTALRSGNKECPTCRKKLVSKR
SLRADPNFDALICKIYPSRDEYEAHQDKVLEQLSRLHNTEALSCSIEQGLRMQARHRAQR
VRKIHQEGENAISGGEDNGDTQSHISHDSTTVSYGPEAGPSRNKRPRASDDSGPEAGGES
RTPPRRLPSHGTNSEIELIFQPHPLLVTTQQYSQTRFVKTTANATVDHLSKYLALRIALE
ERQTDGCVEGETAAAVSEKDFTIFIKTAGGQFSILNGSLTLELVNEKFWKVCKPLELYYA
MTVEQNQTSQL
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgagctttgatttcacggagtctgttctgggatcagttaattttcacatcgcgccgtgt
ctttgcgaagtcatgatggcaaatccagtgagcattcagacgctcagtaaaacatgggaa
ctgagcctgtatgaactacaccgaacaccacaggaagcactcatggacagcacagagatc
gcagtgtctcccaggagcctccacagtgaactgatgtgtcccatctgtctggacatgctg
aagaacaccatgaccaccaaagaatgtctacatcgcttctgctctgaatgcattgtcact
gcgctcagatcaggaaacaaggaatgtcctacctgcaggaagaagcttgtgtccaagcga
tctctgcgtgctgatccaaatttcgacgctttgatctgtaagatctacccgagtcgtgac
gagtacgaggcccatcaggacaaagttctggagcagctcagccgactgcacaacacggag
gcgctcagctgcagtattgagcagggcctgcgcatgcaggccagacacagagctcagcgt
gtccgtaagatccaccaggagggtgaaaacgctatcagcggcggcgaggacaacggtgac
acccaatcccacatctcgcatgactccaccactgtgagctacggtcctgaggccgggccc
agccgcaacaagagaccgcgggcgtccgacgattccggacccgaggccggcggagagagc
cgcacccctcctcgacgactaccaagccacggcaccaactctgagatcgaactcatattt
caaccgcatcccctgctggtgaccacgcaacagtacagccaaacaagatttgtcaaaaca
acagccaatgcgaccgtagaccacctgtctaaatacctggctcttcgcatagctctggag
gagcgtcagacagacggttgtgtggagggagagacagcagccgctgttagtgagaaagac
ttcactatcttcataaagacagcaggaggacagttctccatcctaaatggctcattgact
ctggagttggtgaatgagaagttttggaaggtctgtaaacctctggagttgtactacgct
atgacagtggagcagaatcagacgtctcagctgtga

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