Paramisgurnus dabryanus (large-scale loach): 135780001
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Entry
135780001 CDS
T10799
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog isoform X1
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135780001 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdab03009
]
135780001 (utp18)
Ribosome biogenesis [BR:
pdab03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135780001 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
KNTC1_N
Beta-prop_VPS8
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
135780001
NCBI-ProteinID:
XP_065147021
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Position
19:28971204..28981493
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AA seq
519 aa
AA seq
DB search
MMDSTVPFVRQKQNAKRRLSKADAAAHVTEERRKQKKHAALCATLGEEDASVRLLEELVF
GADEQELTERLAEGNNTLLKDDTGSVSSEDDEVYPQHLAKKKAVWEDDDDDVEEDVDMTH
RFRVDYNKSEAQTKMTKQRLQQHLKEQFQKAMGGTPNWAEMTTRTGKKKADEESDDSEEL
MQRTGNFVGSSESLPKGIIKIKKCLNANNERPGDDRLTTVQFHSSAQIVMTAGLDCSISL
FQVDGKSNPKIQSIHLENFQVNKASFTADGEHIVATGLRNKLFYMYDMMEGKIIPVSTVR
GLNEQRVKDFEVSPDGKYLLLSGSSGYLHLMTMKTREVIQSMKMNGDVCSAGFTGDSSKI
FSNSVDGDVFIWDVRSSKCLKRFTDDGCVKATSLALSGDDVYLACGSQSGVVNIYSQKDC
LHNIEPKPLKAVMNLVTPATSLCFNNTSEILAIGSRAEDDANRLVHIPSFTVFSNFPQMR
KKTIFQTRCLDFSPRSGFYTVANNKGHALLFRLLHYKNF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatggactcgactgtgcctttcgttagacaaaagcagaacgcaaagcggcgtttaagt
aaagcggatgcggccgcacatgtcacagaggagcgccgtaaacagaaaaagcacgcggcg
ctgtgcgcgacccttggcgaggaggatgcgtctgtcaggctgctggaggagctcgtgttc
ggcgcggacgagcaggagctcacggagcgactcgcagagggaaacaacactttactaaaa
gatgataccggcagcgtttcttcagaggatgatgaggtgtatccacaacatcttgcaaag
aaaaaagctgtatgggaagatgacgatgatgatgtggaagaagatgtggatatgacacat
cgatttcgtgtggactataacaagagtgaagcacaaactaaaatgaccaaacagaggcta
cagcaacacttaaaggaacagtttcagaaagcaatgggtggaacaccgaactgggcagag
atgacgacaaggacgggaaagaaaaaggcagacgaggaatctgatgacagtgaagaactg
atgcagcgcaccggtaactttgttggctcatctgaaagtcttcctaaaggaattattaag
attaaaaagtgcttaaatgcaaataatgaacgtccaggcgatgaccggcttaccacagta
cagtttcactcctcagctcagattgtgatgacagctggtctggattgctcgatttcactt
tttcaggttgatggaaagtcgaaccccaagatccagagcattcatctggagaattttcaa
gtgaataaggcttccttcaccgctgatggggaacatattgtggccactggactgagaaac
aaactcttctacatgtatgatatgatggaaggcaaaattatcccagtgtctactgttaga
ggactaaatgaacagagggtgaaagactttgaggtctctccagatggaaagtatcttctc
ctctctggatcttcaggatatcttcatctcatgaccatgaagactagagaggtgattcag
agcatgaagatgaatggagatgtgtgttcagcaggtttcactggagacagcagtaagatc
ttcagtaattctgtggacggtgatgtgtttatctgggatgtgaggagcagtaaatgttta
aaaaggtttacagatgatggctgtgtaaaggcgacgtcactggcactgtcaggagatgac
gtgtatttggcctgtggctcccagtctggtgtggtgaacatctattcacaaaaggattgc
ctgcacaatattgagcccaaacctctgaaggccgtcatgaacctggtgacacctgccacc
tccctgtgcttcaataacacctcagagattctggccatcggatcacgagcagaggacgat
gccaaccgattggtgcacattcccagtttcacagtgttctccaactttccacaaatgaga
aaaaagacaatattccaaacccgctgtctggatttctctccgaggagcggcttctacact
gtggccaataataaaggccatgcacttctgttcagacttctgcattataaaaacttttaa
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