Paramisgurnus dabryanus (large-scale loach): 135780008
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Entry
135780008 CDS
T10799
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135780008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135780008
03016 Transfer RNA biogenesis [BR:
pdab03016
]
135780008
03012 Translation factors [BR:
pdab03012
]
135780008
04131 Membrane trafficking [BR:
pdab04131
]
135780008
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdab04147
]
135780008
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
135780008
Transfer RNA biogenesis [BR:
pdab03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
135780008
Translation factors [BR:
pdab03012
]
Eukaryotic type
Elongation factors
135780008
Membrane trafficking [BR:
pdab04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
135780008
Exosome [BR:
pdab04147
]
Exosomal proteins
Proteins found in most exosomes
135780008
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
135780008
NCBI-ProteinID:
XP_065147033
LinkDB
All DBs
Position
19:complement(15465600..15469000)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEINKEVGAYIKK
IGYNPATVAFVPISGWHGDNMLEPSSNMSWFKGWKIERKEGGASGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMVVTFAPANLTTEVKSVEMHHESLA
EALPGDNVGFNVKNVSVKDIRRGNVTGDSKNDPPMEAANFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIILMIPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKAVEKKTSSASKVTKSAQKAAKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaaaagattcatattaacatcgtggttattggccacgtcgattctggcaag
tccaccaccacaggacatctcatctacaaatgtggaggcatcgataagagaactatcgag
aagtttgagaaagaagccgctgagatgggcaaaggttccttcaagtatgcctgggtgttg
gacaaactgaaggcagagcgtgagcgtggtatcaccattgacatttctctgtggaagttt
gagaccagcaaatactacgtcaccatcattgatgcccctgggcacagagattttatcaag
aacatgatcactggtacctctcaggctgactgtgccgttctgattgtcgctgctggtgtt
ggtgagtttgaagctggtatctcaaaaaatgggcagactcgtgaacatgccttgcttgcc
tacacccttggagtgaaacaacttattgttggagtgaacaagatggactccacagagccc
ccctacagccagaaacgtttcgaggaaatcaacaaggaagtcggcgcctacatcaagaag
atcggctacaaccccgccactgttgcctttgtcccaatttctggatggcatggtgacaac
atgctggagcccagctcaaacatgagctggttcaagggatggaaaattgaaaggaaagaa
ggtggcgccagtggagtcacccttcttgaggccctggactccattctgccaccctctcgg
cccactgacaaacctcttcgtttgcctctgcaggatgtgtacaaaattggaggtattgga
actgtgcctgtcggacgtgttgagaccggaactttgaaggctggtatggtcgtgaccttt
gcccccgccaacttgaccactgaggtcaagtctgttgagatgcaccacgagtctcttgct
gaggctctgcctggtgacaacgttggcttcaatgttaagaacgtgtcagttaaagacatc
cgtcgtggtaatgtgactggcgacagcaagaacgatccccctatggaggctgccaacttc
acagctcaggtaatcatcctcaaccaccccggtcagatctctcaaggctacgccccagtt
ctggactgccacactgctcatattgcctgcaagttttctgagctcaaggaaaagattgac
cgccgttctggcaagaagcttgaggacaaccccaaggccctcaaatctggagatgctgcc
attattcttatgatccctgggaagcccatgtgtgtggagagcttctcacaatatccacca
ctgggtcgtttcgctgtgcgtgacatgaggcagaccgttgctgttggcgtaatcaaggct
gtagaaaagaaaacctcctctgctagcaaggtgaccaagtctgctcagaaggctgccaaa
gccaaatga
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