Paramisgurnus dabryanus (large-scale loach): 135781003
Help
Entry
135781003 CDS
T10799
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase rfwd3.S
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135781003 (rfwd3)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135781003 (rfwd3)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135781003 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4_2
Beta-prop_THOC3
zf-RING_UBOX
Beta-prop_WDR5
zf-C3HC4
WD40_CDC20-Fz
WD40
zf-rbx1
EIF3I
zf-C3HC4_3
zf-RING_5
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_1st
Rtf2
zf-RING_Vps41
WD40_WDHD1_1st
WD40_Prp19
zf-RING_11
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Myo5a
WD40_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_ACSF4
Beta-prop_EIPR1
NapD
DUF5581_N
HALZ
DUF4200
Motif
Other DBs
NCBI-GeneID:
135781003
NCBI-ProteinID:
XP_065147388
LinkDB
All DBs
Position
23:23685734..23693316
Genome browser
AA seq
654 aa
AA seq
DB search
MEDMEVDPQVEVIARPNEENLIVVSDSDSSTDEEDSSIQIIDLSDRARRSAVGNAQRQLI
DDQFVGHSYTERLLSLIHTVQEMSRAAPVLRSSQTSTTTTSEPSISTASEGTDAVAQPQT
QTEAQPQTQTEAQPVHPKPDTEPVSESIQQTTPAVNPAAQGGGDDEDGETCSICFEPWTM
AGKHRLAALRCGHLFGYECINRWLYGGNKCPQCNKKAKRDHIIFLYARKLQAIDNTEEVQ
LKKSLEDEQRLRRMKEVETAQCRLQLQTIKDENTRLQKEVEELRRLKAQVAFSSSQGAAL
SLSQRQDSSSGGRYVFSTAVLVSQAGGCRVLAHCERLGCLLASQPSPQATFLPGFGVKKI
STANLKPSQYVPIHSKQIRGLAFSQQHDSLLLSAALDNTVKLTSLMANTVVQTYNTGRPV
WSCCWCHDNNNYIYAGLCNGSVLVYDTRDTSTFVQELVPLGSKCPVVSLSYIPRAASSSF
PCGGLIAGTLDGGCFWEHSEGTAYTPHILPLESGNCTDIQVEPDSRHCLITYRPGRLNPA
LRCVLMELNRSPHSDNGQPPVCSCSPVQTFTAGSSCKLLTKNAVFKSPAGEASTLVCAGD
ESTNSTMVWDAGTGALLQKLPADIPVLDICPFEVNQSSYLGSLTEKMLKVYKWE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatggaggtggatccacaagtggaggtaatagcgcgtccaaatgaggagaat
ctgattgtagtgtctgattctgacagcagcacggatgaggaggattcatccatacagatt
atagatctctctgatcgagccagacgttcagccgttggcaatgcccaaagacaacttata
gatgatcaatttgtaggacacagttacaccgaaagacttctgtcactcatccacacagtg
caagagatgtcacgtgcagctcctgtgctgcgctccagccaaacatccaccacaacaacg
tcagagcccagtatttctacagcgtctgaagggacggatgctgtagcacagccccaaaca
cagacagaagcacagccgcaaacacagacagaagcacagccagttcatccaaaaccagac
actgagccggtctcagagtccatccagcagactacacctgcggtaaatcccgctgcacag
ggcggtggagacgatgaagacggtgaaacctgctccatctgttttgaaccctggacaatg
gctggcaagcaccgcttggctgcccttcgctgcggtcacctttttggctatgaatgcatt
aatcgctggctctatggtggaaataaatgcccacagtgtaataaaaaggccaaacgtgat
cacatcatctttctttatgcacgaaaactccaagccattgacaacacggaagaagtgcaa
ctaaagaaatctttagaggatgaacagcggttacgcaggatgaaagaggtggagactgct
caatgtcgtctgcagttacagacaataaaggatgaaaacacaagactacagaaagaggtt
gaggagttgcgaagattaaaggctcaggtggccttcagttcttctcagggtgctgcgttg
tctttatcccagcggcaggactcatccagtgggggacgctacgtcttttctacagcggtg
cttgtttctcaagcggggggctgtcgggtgttggcccactgcgagcgcctcggatgcctc
ctggcatcccagccctccccacaagcaacgtttttaccaggctttggggtgaagaagatc
agcaccgccaatctcaaacccagtcagtacgtccccattcactccaaacagatcagaggt
ctcgccttcagccaacagcatgacagcttactgctgtccgcagccctggacaacactgtt
aaacttactagcttaatggcaaacacagtggtccagacctacaacacaggcagacctgtg
tggagctgctgctggtgccatgataacaataactacatctatgccggtctctgcaacgga
tcggtgctagtgtacgatacacgagacacaagcacttttgtgcaggaattagtaccattg
ggctccaagtgtccggtggtgtctctgtcctatatacctcgcgctgcctccagttcgttc
ccctgtggcggtctcatagctggtacgctggatggtggctgcttttgggagcacagcgaa
ggaaccgcgtacacacctcacattctgcctctggagtccggtaactgcacagatatacag
gtggagccggacagcagacactgtctcatcacatacaggcctggtcgtttaaacccagct
ctgcgttgtgttctgatggaactcaatcgaagccctcattcagacaacggccagcctcca
gtgtgctcttgttcgccggtccagaccttcactgctggctcctcgtgcaagttactcacc
aagaacgctgtctttaagagtccagctggagaggcttctacattagtatgtgctggagat
gagagcacaaactcaaccatggtttgggatgctgggactggggccttactccaaaaactt
cctgcagatattcccgtactagatatctgtccctttgaggtgaaccagagcagctacctg
ggatctctaactgagaagatgctaaaggtttataagtgggagtga
DBGET
integrated database retrieval system
