Paramisgurnus dabryanus (large-scale loach): 135781200
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Entry
135781200 CDS
T10799
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135781200 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135781200 (lrrc4ca)
Cell adhesion molecules [BR:
pdab04515
]
Immunoglobulin superfamily
NGL family
135781200 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
LRR_9
Ig_2
LRRNT
Ig_6
Sp38
DUF6821
Syndecan
Mid2
Motif
Other DBs
NCBI-GeneID:
135781200
NCBI-ProteinID:
XP_065147621
LinkDB
All DBs
Position
23:18025492..18119898
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AA seq
648 aa
AA seq
DB search
MINKMTSSLMQQTMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPVESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSIIRPGSF
KGLIHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCDCDILWLSWWLKEMVPANTSCCARCASPTSHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRANSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASAILNVSSTENGGVSYFTTVTVETTESSHEEGHPTVQQKGGPT
PSSGIWETSPPSFTTTTTTTARTSLSTKATDKTYTIPVTATIDGSLHTLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPTMEGHLTLPP
LEHEHLNHYNAYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaagatgacctcctccctgatgcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgacccattgttcgtgctgttgcttgccctgcagcttctggtggtggct
ggcctggtgcgagcgcagacctgcccctccgtctgctcctgtagcaaccagttcagcaag
gtcatctgtacgcgacgtggccttcgagatgtccctgacggcatttccaccaacacgagg
tatctgaaccttcaggaaaacctcatacaggtgatcaaggttgacagcttcaagcacctg
cgacacctggagatactacaactcagcaaaaaccatatccgcaacattgaaattggagcc
ttcaatgggctggctaacctcaatacactagagctttttgataatcgactgaccacaatc
cccaatggggcttttgagtacctgtccaaacttaaggagctttggttgaggaataaccct
gtagaaagtataccttcctatgccttcaaccgcgtaccgtcactgcgaaggctggattta
ggtgagttgaaaaggttgtcgtatatttcagaaggtgctttcgaaggcctgagcaacctg
cgttacctgaacctgggcatgtgcaacctgaaagagattcccaacctgattccgcttgtc
cggttggatgagttggagatgtcgggaaaccagctctctataataaggccagggtccttc
aaaggcctcattcacctacagaaactgtggatgatgcatgcacagatccaaacgattgag
aggaacgcctttgacgaccttcagtccctcgtagagctcaatttggcccacaataacctt
accctcctgccccatgacctgttcaccccactgcatcacttggagagagtacacttgcac
cacaacccctggaattgcgactgtgacatcctgtggcttagttggtggcttaaagaaatg
gtaccggctaataccagttgctgtgctcgctgtgcttcacctactagccacaaggggcga
tacattggtgaactagaccagaactatttccattgttacgcacctgtgattgtggagcct
ccagctgacctgaacgtgaccgaaggcatggcagcagaactgaaatgtcgagcaaactct
ttgacctcagtcagttggatcacacccaacggctcaatcatgacacacggggcttacaag
attcggatttctgtgctcaatgatgggacgttaaacttcaccaatgttacgatgcaggac
acaggaacttacacttgcatggtgagcaactccgcaggcaacacgacagcctcggccata
ctcaatgtgtcctctacagaaaatggtggcgtcagttacttcactacagttaccgtcgag
accacggaatcgtcgcacgaagagggccacccaacggttcagcagaagggaggtcccacc
ccctcctctggaatttgggagacctcaccaccttccttcaccacaaccaccaccactaca
gcaaggacttcgctgtccaccaaggccaccgacaagacctacaccatccccgtcacagcc
acgatcgatggctctctccacacccttgacgaggtgatgaagaccaccaagatcatcatc
ggctgcttcgtggccatcactctgatggcggccgtcatgctgataatcttttataaaatg
cgcaaacagcatcaccagcagaaccatcacgcaccaacgcgaaccatcgagatcatcaac
gtagatgaggactgcgtaaccggtggacctaccatggagggtcatttgaccctccctcca
ctcgagcatgagcacctgaatcattacaatgcttacaagactgcatacaaccacgcatcc
accatcaattctatacatagctctgcccacgaacctttgctaattcgggccagttcaaaa
gacaatgtacaagagacccagatctga
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