Paramisgurnus dabryanus (large-scale loach): 135781328
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Entry
135781328 CDS
T10799
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04145
Phagosome
pdab04814
Motor proteins
pdab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135781328
09142 Cell motility
04814 Motor proteins
135781328
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135781328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135781328
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pdab04812
]
135781328
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
135781328
Cytoskeleton proteins [BR:
pdab04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
135781328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_EML
Dynein_IC2
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
135781328
NCBI-ProteinID:
XP_065147822
LinkDB
All DBs
Position
19:complement(16613520..16684365)
Genome browser
AA seq
628 aa
AA seq
DB search
MADKSDLKAELERKKQRLAQIREEKKRKEEERKKKESETQQKAEVAPEDSDLDRKRRETE
ALLQSIGISPEPSLVPTPMSPSKSMSTPSEAGSQDSVDAAAAGRTLQWDTDPSVLQLQSD
SELGRRTHRLGPSKITQVDFLPREVVSYCKETQTPLAAHQSEEDEEEDEEVTEPKVGQET
EQQEEDESKDTKEGHPRELTEEEKQQVLHSEEFLIFFDRSLRVMERALAEDSNIFFDYSG
RDMDDKEGDLQGGSSLSLSRLFYDERWSKRRVITCLDWSPQYPELLVASYNNNEDAPHEP
DGVALVWNMKFKKTTPEYIYHCQSPVLAVGFARFHPNLLVGGTYSGQIVLWDNRSHRRTP
VQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYNKS
KPVAVTGMAFPTGDVNNYIVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSAMG
PVDFSHLFVTSSFDWTVKLWSTKQNKPLYSFEDNSDYVYDVMWSPVHPSLFAAVDGMGRL
DLWNLNNDTEVPTASVTVEGAPALNRVRWASGGKEVAVGDSEGRVWIYDVGEMAVPHSED
WARFGRTLVEIRANHGDGEEEGPGEISS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaagtgacttaaaagccgaacttgagcgcaaaaaacagcgccttgctcag
atcagagaggagaagaagaggaaagaggaagaaagaaagaaaaaagagtcagagacacaa
cagaaagcagaagttgctcctgaggattcagatttggaccgcaagcggagagagaccgag
gcccttctccagagtattggaatctcacccgaaccttcattagtcccaacaccaatgtcc
ccatcaaagtctatgagcacacccagtgaagcaggcagccaggactcagtggatgcggca
gcagctggaaggaccctgcagtgggacaccgacccttctgttctccagctgcagtccgac
tctgaactcgggcgtcgaacgcacaggttggggccatctaagataactcaagtggacttt
ttgcccagagaggtggtgtcttactgtaaagagactcagactcctcttgcagcccatcag
tctgaagaagatgaagaagaggatgaggaggtcacagaaccaaaagttggccaggaaacc
gaacagcaggaagaggatgaaagcaaggacacaaaagaaggccacccgcgggagctgacg
gaggaggagaagcagcaggttctgcactcggaggagttcctcatcttcttcgaccggagc
ctccgtgtgatggagagagctttggccgaggactccaacatctttttcgactacagcgga
cgagacatggatgataaggagggagatctgcagggtggatccagtctctcgctcagtcgt
ctgttctatgatgagcgctggtcaaagcgccgggtcatcacctgtctggattggtctcct
cagtaccctgagcttttggtggcttcctacaacaacaatgaagacgctcctcacgagcca
gatggtgtggcgttggtgtggaatatgaaatttaagaagaccacaccagagtacatctac
cactgccagtctccagtgttggcggtgggttttgcacggtttcatcctaacctgttggtg
ggtggcacgtactcgggacagattgtactctgggacaaccggagccacagaaggacaccg
gttcagaggacccctctgtccgctgcagcccacacacaccctgtatactgcgtaaatgtg
gtgggcacccagaatgccaacaacctgatcacggtgtccacagacggcaggatgtgctct
tggagtttggatatgttgtcacagcctcaggagagcatggagctggtatataataaatct
aagcctgtggctgtaaccgggatggcgttccccactggagacgtcaataattatatagtc
ggcagtgaggagggaacggtgtatacggcgtcaagacatggcagtaaagctggtatctgt
gagatgtttgagggccatcaggggccagtgacaggcatcagttgtcacagcgccatgggt
cctgtcgacttctcccacctgtttgtcacctcctcttttgactggactgtaaaattgtgg
agcacaaagcaaaacaagccactgtactcttttgaggacaattccgactacgtctacgac
gtgatgtggtcgcccgtgcacccctcgctcttcgccgctgtggatggcatgggtcgtctg
gatctgtggaacctgaacaatgacactgaggtgcctactgctagcgtgactgtagagggc
gctcctgcgctcaaccgggtcagatgggcatctggaggaaaagaagtcgcagtgggagat
tcagagggccgtgtatggatatacgatgtcggagagatggccgtgccccatagtgaagac
tgggcccgtttcggtcgtacgctggtggaaatccgtgccaaccatggagatggtgaggag
gaggggcctggggagatatcgagctaa
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