Paramisgurnus dabryanus (large-scale loach): 135781475
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Entry
135781475 CDS
T10799
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135781475 (vps50)
Membrane trafficking [BR:
pdab04131
]
Protein recycling
Others
EARP complex
135781475 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
135781475
NCBI-ProteinID:
XP_065148054
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All DBs
Position
19:complement(16986314..17141032)
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AA seq
990 aa
AA seq
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MQKIKSLMARQGLKSPQESVVDMSPLETFRTPSKEELRELREQPTNPQEEQEIIDSIEEV
YFSSDSFDMVQYELEKLPPDLNLQELEDYRDMLKRQQAAVSKRVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLRTAKGGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYAGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYRDLCTHITPDSYIPCLTDLCKALWEVMLSYYLTMQWHDEHYKEEEATPAAD
DPSAKGSDESTVGRSYVKKKLEHGLTRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVI
SRLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFS
IAQLHEFKFMGQCRSPSVSPSRLPEFTKPEDLSLFEQFLQGGNPFEMQIDNKEEETEDVL
ASNGYESDELEKGVYQDYDSDSDVPDELKQDYVDEQTGDVPVKSVSRETLRSRKRSDYNL
NKANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDT
NIPSASVPSQGSQAGVSRQTTPAYWYESSGLGLISSRLRTTLSRIQESLIDMEAGGESAG
SHATPEERKEKVPSPHLSQLVVLTASESLYGLAERVVATESLVFLAEQFELLQPHLDTMM
PSAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMVGVKWDIKEIMSQHNV
YVDVLLKEFEKFNQRLGDVSKIVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGR
ALMQLDFQQFLMKLEKLTDLRPVPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLTN
LVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctttgatggcccgtcagggcttgaaaagtcctcaagagagtgtg
gttgacatgagccctctggagactttcaggacccccagcaaggaggagctgcgagaacta
agagagcagccaaccaatccccaggaagagcaggaaatcatcgacagcattgaggaagtg
tacttctccagcgactccttcgacatggtgcaatacgagctagagaaactccctccggat
ctgaaccttcaggaactggaagattacagagatatgctgaagagacagcaagcagccgtg
tctaaaagagtggccgacctcattttggagaaacagccttcctatgttaaggagcttgag
agagtgacatctctgcagaccaacctgcagctggctgcagttatctgcacaaatgcgcga
agacagcttcgtactgctaaagggggctttactgaagccagtctggggcttttggccaat
cagagacgccggcagctgttgacaggattgctgaagtctttgaggaccataaagactcta
caaagaactgatgttagattaagtgagatgctggaggaggaggattatgcaggagcgatc
cagttgtgtttagaatgccagaaggccgccagcactttcaaacactacaactgtataagt
gagttgaattccaagctgcaagacaccttggagcaaatagaggaacaactagatgtggct
ctgtccaaaacttgcaagcactttgatgtctctcactacaccaaagttcaactggcatat
aagcttctaggcaagacacagacggccatggaccagttgcacatgcacttcacgcaagcc
atccacaacaccgtcttccaggtggttctgggatacgtggaactgtgtgctggcaatgcc
gacaccaagtttcagaagatgcagtacagggatctttgcacgcacattaccccagacagc
tacatcccctgcctgacagacctctgcaaggcattgtgggaggtgatgctcagttactac
ctgaccatgcagtggcacgacgagcactacaaagaagaagaggcgactcctgcagcggat
gaccccagtgcaaaaggctcggacgaatccacggtgggccgcagctatgtaaaaaagaaa
ctggaacatggcttaacacggatctggcaggatgtccaattgaaagtgaaagcctatttg
ctgggaacagacatgtctaacttcaagtacgacgacttcattgtggtgctggatgttatc
agcaggttaatgcaggtgggagaggagttctgcggaagcaagtcggaggtattgcaggag
tccattaagagacaaagtgtaaactactttaagaactatcacagaacccgcctggaggag
ttgcgaatgtttctcgaaaacgaaacttgggagttgtgtcccgtgaagtcaaacttcagt
attgcccagcttcacgagtttaagttcatgggtcagtgtcggtctccctcggtatctccc
agcagactaccagaattcacaaaacctgaggatctttctctctttgagcagttcctacag
ggtggaaacccatttgagatgcagatagataataaggaagaagaaacggaggacgtcctg
gcttctaacgggtatgaatcagatgagctggaaaagggcgtgtatcaggactacgacagt
gatagcgatgtacctgatgagcttaagcaagactacgtggatgaacaaacaggagacgtg
cctgtgaagagcgtgtccagagagaccctccgaagccggaagaggtccgactacaatttg
aacaaagccaatgcacccatccttaccaataccaccctcaacgtgattcgcctggttggg
aaatatatgcagatgatgaatattctgaaacccatcgcctttgatgtcatccactgtgtc
tctcagctctttgattattacctttatgccgtctacaccttctttggccgcaacgacacg
aacataccgtctgcatctgtgccttctcaaggctctcaggctggggtgtccagacagaca
acccctgcctattggtatgaatcttctgggttaggtctgatcagcagcaggttgagaact
acgcttagcaggatccaggagagccttatagatatggaggctggaggagaaagtgcaggt
tctcatgcaactcctgaggaaaggaaggagaaagtccccagccctcatctcagtcagctt
gtggtccttacagctagtgaatcgctctatgggttggcagagagagtcgtcgccaccgaa
tcactcgtttttctggcggagcagtttgagctccttcagccccacctcgacaccatgatg
ccttcagccaagaagcccttcctccagcagttctactcacagactgtatctaccgccagt
gaactccgcaagcccatttactggatagtggcagccaaagccatagattacgaacagatg
cttttactgatggtgggagtaaaatgggacattaaagagataatgtcacagcacaacgtc
tacgtggatgtccttttaaaggagtttgagaagttcaaccagagacttggagatgtttcg
aaaatagttcggattcctctgccagtgtccaatgtcttatgggagcactgtatccgtctg
gccaacaggacattagtggagggctacgctaatgtgaagaaatgcagtaatgaaggacgt
gcgctaatgcagctggacttccagcagttcctgatgaagctggagaaactcacagacctc
aggccagttccagataaagagtttgtagagacctatatcaaagcatactacctaactgag
aacgacatggagcagttcatcaaaaaccacagggagtattcaatgaagcagctgactaac
ttggtcaacgtctgcctcgggtcccacatcaacaagaaggcgagacagaagctcctcgca
gctatcgatgacattgaccgaccaaaacgataa
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