Paramisgurnus dabryanus (large-scale loach): 135781546
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Entry
135781546 CDS
T10799
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135781546 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pdab03310
]
135781546 (roraa)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135781546 (roraa)
Nuclear receptors [BR:
pdab03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
135781546 (roraa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
135781546
NCBI-ProteinID:
XP_065148170
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Position
23:7773939..8145591
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AA seq
519 aa
AA seq
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MESPPDPASDPGNGVSEPVTPVRETPVNLETLRKAEHQAPVRRQSCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
TYGLTTNGLTELHDDLSGYMNGHTPDGTKPDSGVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFTSGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDPQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcgagcgacccgggcaacggcgtctcagagccggttacc
ccggtcagggaaaccccggtaaacctggagaccctccgcaaagctgagcaccaagccccg
gtgcgcaggcagagctgctccagtaccaacagaggtatttcagtaacaaagaagacacac
acctctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggtgtgataacgtgtgaaggctgcaagggtttcttcaggaggagtcaacagagcaat
gcggcgtattcatgcccgcgtcagaagaactgcctgattgaccgcaccagccgaaatcgc
tgccaacactgcaggctgcagaagtgtctggccgtgggcatgtcacgtgacgcggtgaag
ttcggccgcatgtcgaagaaacagcgagatagtctgtatgcagaagtgcagaaacaccgg
ctccaacaacaacagcgggaccaccagcagcagcccggcgaggccgagcccctaacccca
acctatggcctcacaaccaacggtctgaccgagctccacgatgacctgagcggctacatg
aacggccatacacctgacggcactaaaccggactcgggcgtcagcagcttctacctggac
atccaaccttcacccgaccagtctggcttggacatcaatgggatcaagccagagcccatt
tgcgacttcacctcaggctcaggcttcttcccgtactgttccttcaccaatggagagaca
tcccccactgtttccatggctgagctggagcatctggcccaaaacatttccaagtcccat
atggagacatgtcagtacctgagagaagagcttcagcagatgacctggcaggcatttctt
caggaagaagtggagagctaccagaacaagcccagagaagtcatgtggcagttgtgtgcc
attaaaataacagaggccattcagtacgtggtggagtttgcaaagcgcatcgatggcttc
atggagctctgtcagaatgatcagatagtgcttctcaaagcaggctctttggaggtggtg
tttgtcagaatgtgccgtgccttcgaccctcagaacaacacagtctatttcgacggaaag
tatgcagggcctgacgtgtttaaatcgttaggctgcgatgatttgatcagctctgtcttc
gagtttgggaaaaacttgtgttctatgcacctctctgaagacgagatcgccctgttctct
gcctttgtgttgatgtctgcagaccgatcttggcttcaggagaaggtgaaggtggagaaa
ctccagcagaaaatccagctggcacttcagcacgttctgcaaaagaaccacagagaggac
ggcattctgacaaagttgatatgcaaagtctccacactgcgagctctgtgcagccggcat
acagaaaagctgacggcgttcaaagcaatatacccagacattgtgcgagcccacttcccc
ccattgtacaaggagttgttcggatcagactttgagcagtccatgcccgttgacgggtaa
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