Paramisgurnus dabryanus (large-scale loach): 135781580
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Entry
135781580 CDS
T10799
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04510
Focal adhesion
pdab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135781580 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135781580 (lamb1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ATG17_like
Motif
Other DBs
NCBI-GeneID:
135781580
NCBI-ProteinID:
XP_065148231
LinkDB
All DBs
Position
23:complement(6599309..6643106)
Genome browser
AA seq
1790 aa
AA seq
DB search
MDLENMLLHLLSLLCLGSWALADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGIQ
KPEPFCIVSHLQEQKKCFVCDSRDSYDESTNLFTGHRIENVVTTFALNRLKTWWQSENGL
ENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGNTWQVYRYFAYDCESSFPSIS
QGPMKKVDDVICDTRYSDIEPSTEGEVIFRVLDPVFRIDDPYSPRIQNMLKITNLRVKFT
RLHTLGDNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDGAGEIVEGMVHGHC
MCNHNTMGLNCERCQDFYHDLPWRPAEGRNTNACQRCNCNLHSDSCHFDMAAYQASGNIS
GGVCDDCQHNTTGNKCEQCRPFFYQHPERGIRDPNICEPCNCDPIGSLNGGICDGLTDVS
LGLISGQCRCKPNVEGERCDQCKQGHYGLSEDPLGCQPCTCNSLGTLPGGSPCDTESGNC
YCKRLVTGRNCDQCLPEHWGLSNDMDGCRACDCDHGGAINNHCSPETGQCQCREHMFGRR
CDQVESGFYFIALDHYTYEAEDAKFGPGVTVVPRNYPHDRSPTWTGIGFVNVPEGAYLEF
SIDNIPYSMEYDIIIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQMVSLHP
GSRYVVLPRPVCFEEGLNYTIRLSLSLYSALSDIQSPYTLIDSIVLMPRCKNLDMFSGHG
SEGGDLMTNNAWETFQRYRCLENSQAVIKTPMTDICRNYIFSVSALLHQGVRACECDPQG
SLSTVCDPNGGKCQCRSNVVGRNCDKCAPATFLFGPQGCRPCDCSPEGSVHSFCHEGTGQ
CVCIHAAYGRQCDRCLPGHWGFPNCRPCTCNGHAEECDAYTGQCLTCRDHTTGHNCERCL
NGYYGDPVLGSGDHCRPCMCPDGPNSGRQYSGACYKNFDSDQVFCVCNQGYKGARCEECA
PGYYGNPHEVGGECRPCQCNNNIDMMDPASCDARTGACVKCLYHTEGEGCDRCKLGYYGN
ALNQSCRKCVCNHMGTAEEMCPSQGNCNCDLSSGQCQCLPNVVGQHCDQCAPDTWNMASG
KGCEICDCELDHSSSTSCNEITGQCVCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRG
IEEQQCNKVTGHCVCVEGVSGPRCDTCARGYSGEFPNCERCHQCFAEWDIIVGDLTNQTH
RLVQKVNTIKASGVTGPYQATINSIESSADSIRDILADNPATEPLAEIQGLLEQATALMA
EMNKNLNLTEDTLSEISTDNNSTVIKLNSLKEEAEKLKETVKDLQEQVEFVKNSDVRGAR
ASVARYYQQSQEAEVRANASTIDPYNLVNQSATIRSETEDLMNQTKEEFIQRQDEFSKQL
DNLAGELETLDLSELSEKTCGSPAGSENCADSPCGGLSCVDADGNRKCGGEGCDGITTLA
HNAWQKAKDFDLEIISAMEEVDKLSKMVSEAKVKADEAKLNAQEVLTKTNETKRRVDDSN
EELRQLIKQIRDFLTQDGADLESIEAVANEVLQMQVPTTPAQLQNLTAEIRERVESLSDV
EDILNQSAADILKAEALLEQARKARKEASDVKATAFMVKEALEQAEQAQTSVTEALKQAT
ADIRGTQALLVSVESETSDSELKLSNATRRLLKLESDVALLKEKALNTSISVNSTENDAE
SINQLAEQLKKELDTELKDKYSTVEGLITEKAEVVAEAKKNAEKLQKEAKDLLLQANNKL
KLLKDLEKSYDENQKLLEDKANELVDLEKAVRDLLQEISHKVTVYSTCLF
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atggatctggaaaacatgctcttacatcttctatcccttttatgtttagggtcatgggct
cttgcagatgtacctgagctgggagatgtttgtacagagggaagctgttatcccgcaaca
ggagatcttctcatcggaagagctcaccaactttctgcaacctcaacatgtggaattcag
aaacctgaaccgttctgtattgtcagtcatttgcaggagcagaagaagtgctttgtgtgc
gattccagggattcctacgatgagagcacaaatctgtttaccggacacagaattgaaaat
gttgtgaccacgtttgccctgaaccgcttgaagacttggtggcagtcggaaaatggtttg
gagaacgtcacaatccagttgaaccttgaggccgagttccacttcactcacctcatcatg
acctttaagactttccggccggctgccatggtgattgagcgttcgtccgattttgggaat
acgtggcaggtgtaccgttactttgcctatgactgtgagtccagcttcccctccatctca
caaggacccatgaagaaagtggacgacgttatttgcgatacgcgctactctgacattgaa
ccttcaactgagggcgaggtcatcttcagggtgttggatccagttttcaggattgatgat
ccatacagccccagaatccaaaacatgttaaagattaccaatctgagagtgaagttcacc
aggctgcacacactgggcgacaaccttctggactcgcgcatagagatcaaagagaagtac
tactacgcaatttacgacatggtggtgaggggaaactgtttttgctacggtcacgcgtct
gagtgcgcccccgttgatggagccggagagatcgtggaaggcatggtccatggccattgt
atgtgtaatcataacacaatgggtctaaactgtgagcgctgtcaggacttttatcatgat
ctgccctggaggccagcagagggacgcaacaccaacgcctgtcaaaggtgcaactgtaat
ctccactcggactcctgtcatttcgacatggccgcgtatcaggcatcgggcaacattagc
ggcggtgtgtgtgatgactgccagcacaacaccacgggcaacaagtgcgagcagtgcagg
ccttttttctaccagcatccggagaggggcatccgcgatcccaacatctgcgagccctgt
aactgtgatcccattggctctctcaatggaggaatctgcgacgggctaacagacgtgtct
ctcgggctgatctcgggtcagtgtcgctgtaagcccaatgtggagggagaacgctgtgac
cagtgcaaacagggccattacggactcagcgaagatcctttgggatgccagccatgcact
tgcaactctttggggacgttacccggcggcagtccatgcgataccgaatcaggaaactgc
tactgcaaacgtttggttaccggacggaattgcgatcagtgcctgcctgagcattggggt
ctcagtaatgacatggatggctgccgagcatgtgactgtgatcacggaggtgccatcaac
aaccattgttcccctgaaaccgggcagtgccagtgtcgtgagcacatgttcggcagacgc
tgcgaccaggtggagtccggtttttacttcattgctttggaccactacacttacgaagca
gaagatgccaagtttggacctggtgtgacggttgtcccaagaaattaccctcatgacaga
tcccccacttggactggtatcggttttgtgaacgttcctgaaggcgcatatctcgaattc
agcattgacaacatcccctattcaatggagtatgacatcatcattcgatacgaacctcag
ttgccagaacagtgggaagaagtgttgatgactgtcatcaggcctcgcgtcatcaccgcc
gacagtcgatgtgccaacacgatgcctgatgatgacaaccagatggtgtctttgcatcct
ggatccaggtatgtggtgctgcccagacccgtgtgttttgaggagggtttgaattacacc
atccgcctgagtctctcgctctactcggctctcagcgacatccagtccccgtacacgctt
atcgattcgattgtgctgatgccacgctgcaaaaacctggacatgttctctggccatgga
tcagagggaggggatttgatgaccaacaacgcctgggaaaccttccagcgataccgctgt
ctggagaacagccaagctgtaataaaaactcccatgaccgatatctgcagaaattacatc
ttcagtgtctctgctcttctgcaccaaggagttagggcatgtgagtgtgatcctcaaggg
tctctgagcaccgtctgtgacccgaacggtgggaagtgccaatgtcgttcgaatgtggtc
ggtcgtaactgcgacaaatgtgccccagccaccttcctgtttggaccacagggatgcagg
ccttgtgattgcagtccagaagggtctgttcatagtttctgccatgaaggcactggtcaa
tgtgtctgtattcatgcggcatatgggcgacagtgtgaccgttgtttgcctggacactgg
ggcttccctaattgtcgcccctgtacctgcaatggccacgctgaggagtgcgacgcctac
actggacagtgcctcacctgcagggaccacaccactggccacaactgcgagaggtgtctc
aacggttactacggtgaccctgtcttgggttctggagaccactgccgcccctgcatgtgc
cctgatggacccaacagcggtcgacagtactctggggcctgctataagaatttcgactcg
gaccaggtgttctgcgtctgtaaccagggatataaaggtgccagatgtgaagagtgcgcc
cctggttattacggaaacccacacgaggtgggcggagagtgccgaccctgtcagtgcaat
aacaacattgacatgatggaccctgcgtcctgtgatgcccgcactggtgcctgtgtaaaa
tgcctgtatcatacagagggcgagggttgtgaccgctgcaagctcggttactatggcaac
gcgctaaatcagagttgtagaaagtgtgtgtgtaaccatatgggcactgctgaagagatg
tgcccttctcagggtaactgcaactgtgatttaagcagtggtcagtgtcagtgtttgccc
aatgtggtgggtcagcactgtgatcagtgtgcgccggacacctggaatatggccagcggt
aaaggctgtgagatctgcgactgtgaactcgatcattcctcaagcacttcctgcaatgag
atcactggccagtgcgtatgtaaacccgggtttggtggcagaacttgcagagagtgtagg
gaactcttctggggcaaccctgaggtcaaatgccatgcttgtgactgcgacccaagaggc
atcgaggagcagcagtgcaacaaggtcacgggtcactgcgtctgcgtggagggagtgtcc
gggcccagatgtgacacatgtgcgcgcggttactcgggcgagttcccaaactgcgagcgg
tgccaccagtgcttcgccgaatgggacataattgtaggcgacctcactaaccaaacacat
cgactggtacaaaaggtcaataccatcaaggccagcggcgttacgggaccctaccaagcc
accatcaatagcattgagagcagcgctgactcgattcgtgacatcctggcagacaaccca
gccactgagcctctcgccgaaatccaggggcttctcgagcaagccactgccttaatggct
gaaatgaacaaaaaccttaacctgacggaagatactctgtccgagatctccacagacaac
aacagcacggtcattaagctaaactctcttaaagaagaagccgagaaattgaaagagact
gtgaaagacctgcaagaacaggtggagtttgtgaagaactcggatgttcgcggagccaga
gccagtgtggcccgctattaccaacagtcccaggaggcggaggtccgtgccaacgcctcc
actattgacccatacaacctggtcaatcagtctgccaccataaggagcgagaccgaagac
ttgatgaaccagaccaaagaagagtttattcaaaggcaggacgagttttccaagcaactg
gacaacttggctggagagctggagactctggacttgtctgagcttagcgagaagacatgt
ggaagtccagctggctcggagaactgtgctgactccccctgcggaggcttgagctgtgtg
gatgcggatggaaacaggaaatgtggaggagagggctgtgacggcatcaccacactggcc
cacaatgcctggcagaaagccaaagactttgacctggagattatcagcgccatggaggaa
gtcgacaagctctccaaaatggtgtcagaagctaaagtcaaagcagatgaggcgaagcta
aacgctcaagaagttctgacaaagacaaacgaaaccaagcggcgagtggatgacagcaac
gaggagctccgtcagctcatcaaacagatccgagacttccttactcaagatggagccgac
ctggaaagcattgaggccgtggccaatgaagttctgcagatgcaggtgcccacaactcca
gctcagctgcagaatctgacggcggagatcagggagcgagtggaaagtttgtcagacgtg
gaggacatccttaaccaaagcgctgctgacatactgaaagcagaagccctgttggaacaa
gcccgcaaggccaggaaagaggcttcagatgtaaaagcaacagctttcatggtgaaggag
gctttggagcaagccgaacaagcccagacgtctgtaaccgaggccttaaaacaggccacc
gctgacatcagaggaacacaagccttactggtctcggtggaatcagagacgtccgattca
gagctcaagttaagtaacgccactcgaaggctcctgaagttggaaagcgatgtcgctctg
ctgaaagaaaaagctctcaacacctccatcagtgtcaacagcacagagaacgacgcagag
agcatcaaccagctggccgagcagctcaaaaaggaattggatacagagctgaaagacaag
tacagtactgtagaggggctcatcacagagaaagcagaagtggtggcagaggcaaagaaa
aacgcagagaaacttcaaaaggaggccaaagatttactgctgcaggccaacaacaaactt
aagctacttaaagatcttgaaaagagctatgatgagaatcagaagttgctggaggataaa
gccaatgagctggtggatctagagaaagctgtgagggatctacttcaggagatcagtcac
aaagttaccgtctatagcacctgtctgttttaa
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integrated database retrieval system
