Paramisgurnus dabryanus (large-scale loach): 135781810
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Entry
135781810 CDS
T10799
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04110
Cell cycle
pdab04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135781810 (smc1b)
04114 Oocyte meiosis
135781810 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135781810 (smc1b)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
135781810 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
135781810 (smc1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
135781810
NCBI-ProteinID:
XP_065148446
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Position
23:13509664..13533613
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AA seq
1234 aa
AA seq
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MGFLKQLDVENFKSWRGKQTIGPFKRFNCIIGTNGSGKSNVMDALGFVMGERAVNLRVKH
TRDLIHGAHIGRPVSTSASVTMIYCGDNNEEMIFSRNISGESSEYRINGNHVTLAKYTGE
LEKIGIVVKAKNCLVYQGAVESIAMMNAKDRTKMFERISNSQELNDEYDTKLVALQNAKE
DTQFQFNRKKAATAEKKQVFKDKTEAEKYQALVDEVKEHKLKLMLFQLFHNEKNITAQSA
SLRDKQVATSQQKKNLDIWEQTVKAQKKEHGRLSRDLQLLEKEIRSQEQILNQQRPQYIK
SKVNTSHHEHKVDEARRTLQKNQKLQAKKEQELEELRSELAELERAWRSCVRQMEEEEAQ
RGAGVQLDEAQLEQYKELKETARKKGAVLNQNAEKLHWEVKAGGDKLQFDLRKKTEIQVN
IKHSLAQLDDLNRRAEKLEEYANTSTKALEEQRQQEEQLAGELERGRVRMKEVNAKLGQV
LIELQNARLDTQENRRQQKRNEVMESLRRLYPDTVYGRLVDLCQPIHKKYQLAVTKVFGK
NMNAIVVTSAKVAHDCIRFLKEERAEPETFLPIDYIEVRPLNERLREVPGAKMVVDVVQC
AQNAPQLKRVVQYVCGNSLVCDTLKDARRIAFEGPERLQTVALDGTLFRKSGVISGGAMD
LSTKARRWEEKDMNKLREQKEHLSTELRALMKLKRKEAELNQIRAQSQGIQTRLKYSNTE
LDSIRKKSIPACQAEISKLGSELSNLETQIDIQTKTVEQKDNEMKDVRNEIHQMEDVVFA
DFCAEIGVANIREYEQDYLRLQQELEKKRLQFESQRTCLNTQLDYEQAQLEKQKTQMKKL
KETIHKEDNIISSLKEEEDRLMSAVEKTQFQLVELNNQLAGKTSLVDDAKAQFEKKNKSL
QEKSRVLVKLQKEAICTEAVLEQLRLGKHNLLLASKIEGLPLILLSGSLDDISDIELDSE
SQSIRTQDIYEREAQMVFDYSALDMSLKALTEESEVESELEKLREEVSSLERMIMGSRAP
NLKALEKMREVKDSFHEVMDAFKTSTHNTKRCSQEFEQVKAKRFNLFSQCFEHVSVIIDQ
IYKKLCRNSSAQAILSAENPNEPYLGGINYNCVAPGKRFMAMDNLSGGEKSIAALALVFA
IHSFRPAPFFVLDEVDAALDNTNIGKVTGFFREMSKESCQIIVISLKEEFYSRADALIGV
YSMFDECMFSRLLTLDLTPYALNDENGTHGEQEK
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcttgaaacagttagacgtagaaaatttcaagtcctggcgaggaaagcaaacc
atcggtccatttaaaagatttaattgtataattggtactaatggatcaggtaaatctaat
gttatggatgctcttggatttgtgatgggagagagggcggttaatctccgtgtaaaacac
accagagatctcatccatggtgcccacatcggcaggcctgtgtccacttctgccagcgtg
accatgatctactgtggagacaataatgaagagatgatctttagtagaaacatctcaggg
gaatcctctgagtaccgcataaatggtaatcatgtgactttggctaaatacactggagaa
ctggagaaaattggcattgtggtgaaagcgaaaaactgcctggtgtatcagggtgctgtg
gagtctattgccatgatgaatgccaaagaccgcacaaagatgtttgagcgaatcagtaac
tcccaagagctaaacgacgagtatgacacaaagctggtggctctacagaatgccaaagag
gacacccagtttcaatttaacaggaagaaagcagctacagctgagaagaaacaggtcttc
aaggacaagactgaggcagagaaataccaagcactggtggatgaagtcaaagaacataaa
ctcaagctgatgctctttcagctcttccacaatgagaaaaacatcacggcgcagtcagcg
tcattaagagacaaacaggtggccacatctcagcagaagaagaacctggacatctgggag
caaaccgtgaaggctcagaagaaagaacatggtcgcctgtcccgagatcttcagctgcta
gaaaaagagatcagatcccaggagcaaattctcaatcagcagagacctcagtacataaaa
tccaaagtgaacacctcccaccatgagcacaaagtggacgaggcgcgcagaacgcttcag
aagaaccagaagctacaggccaagaaagaacaggagctggaggagctaaggagcgagttg
gctgagctggagagggcctggaggtcctgtgtgagacagatggaagaggaggaggctcaa
aggggagcgggagtccagctagacgaggcccaactagagcagtataaggaacttaaagag
acggccagaaaaaagggagccgttttaaatcagaacgcagagaagctgcactgggaggtg
aaggctggcggtgataaacttcagtttgacctcaggaagaaaactgagatacaggtcaat
attaaacactctctagctcagctagatgatttgaacagaagggcagagaagctggaggaa
tacgccaacacttctacaaaagctctggaggagcagcgtcagcaggaggagcagctggca
ggggagctggagagaggccgagtgcgcatgaaggaggtgaacgcaaagctcgggcaggtg
cttattgaactgcagaacgctcgtctggacacccaggagaatcgacgacagcagaaacgc
aatgaagtcatggaaagcctcaggagactctatcctgatacagtgtatggccgtctggtt
gacctgtgtcagcctattcacaagaaataccagctcgccgtcaccaaggtgtttggaaag
aacatgaacgctattgttgtaacatctgccaaagtagcacacgattgcatcagatttctg
aaagaggagcgagccgaaccagagactttccttcctattgactatatagaggtacgcccc
ctgaatgagcgtttgagagaagtgcccggagctaagatggtggtggatgtggttcaatgt
gctcagaacgcccctcagcttaaaagggtggtgcagtatgtgtgcgggaattccctggtc
tgcgatactctgaaggatgcccgtcgcattgctttcgagggccctgagcgccttcagacg
gtggctctcgatggcaccttgttccgtaagtctggagtgatctcagggggcgccatggac
ctgagcactaaagctcggcggtgggaggagaaagatatgaacaaactaagggagcagaag
gaacatctgtcaactgagcttcgtgctctgatgaaactgaagcgtaaggaggcagagtta
aatcagatcagggctcagtctcaggggatccagactcgcctaaaatactcaaacacagaa
ctagactccatacgcaagaagagcatcccagcgtgtcaggcggagatttctaaactggga
agtgagctgtctaacctcgagactcagattgatatacagacaaagactgttgaacaaaag
gacaatgagatgaaggatgtcagaaacgaaatccatcagatggaagatgtggtgtttgcg
gacttctgtgctgagatcggtgtggccaacattcgggaatacgagcaggattatctccga
cttcaacaggagctcgaaaagaagcgcctacagtttgagtcgcagcgtacttgtcttaat
acccagctggactatgagcaggcccagctggagaagcaaaaaacacagatgaaaaagctg
aaagagaccatccacaaagaggacaacatcattagcagtctgaaagaggaggaggacagg
cttatgtcagctgtggagaagacacaatttcagcttgtagaactaaacaaccagctggca
ggaaagacaagtttagttgatgatgcaaaagctcaattcgaaaagaaaaacaaaagcctc
caggagaaatccagggtactggtgaaactccaaaaggaagccatctgcaccgaggcggtc
ctagaacagctaagactgggcaaacacaacctgcttctggcctccaagatagagggctta
ccattgatactgctgtcgggatcactggatgacatcagtgacatagagctggactcggag
tctcagagcatcaggacacaggacatttatgaacgagaggcacagatggtgtttgattat
tcagcactggacatgagccttaaggcccttactgaagaaagtgaagttgagtctgagttg
gagaaactcagagaggaagtctcttctctggagcggatgatcatgggatccagagctccc
aatttgaaagctctagagaagatgagagaggttaaggacagcttccatgaagtcatggat
gcatttaagaccagcacgcacaacactaagagatgcagtcaggagtttgagcaggtgaag
gcaaaacgctttaatttgttcagccagtgttttgaacacgtgtctgtcatcatcgaccag
atctacaaaaaactctgcaggaactccagtgcacaggccattcttagtgctgaaaatcca
aatgagccttacctgggcggcatcaattataactgtgtggcacctggtaaacgatttatg
gccatggacaacctgtctggaggagagaagtctattgctgcactcgcgctggtctttgca
attcacagtttccgtcctgctccgtttttcgtgctggacgaggttgatgccgccctggac
aacacaaacattggcaaggtgacaggatttttccgggagatgtctaaagagagttgccag
atcatcgtcatttccctgaaagaagagttttactcacgagcagatgctctcattggggtt
tattctatgtttgatgaatgcatgttcagcagacttcttaccctggatctcactccttat
gcactaaacgatgagaacggcacacacggagagcaagagaaataa
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