Paramisgurnus dabryanus (large-scale loach): 135782750
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Entry
135782750 CDS
T10799
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04382
Cornified envelope formation
pdab04510
Focal adhesion
pdab04512
ECM-receptor interaction
pdab04514
Cell adhesion molecule (CAM) interaction
pdab04518
Integrin signaling
pdab04810
Regulation of actin cytoskeleton
pdab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135782750 (itga6a)
04514 Cell adhesion molecule (CAM) interaction
135782750 (itga6a)
04518 Integrin signaling
135782750 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135782750 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135782750 (itga6a)
04810 Regulation of actin cytoskeleton
135782750 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135782750 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdab04147
]
135782750 (itga6a)
04515 Cell adhesion molecules [BR:
pdab04515
]
135782750 (itga6a)
04090 CD molecules [BR:
pdab04090
]
135782750 (itga6a)
Exosome [BR:
pdab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135782750 (itga6a)
Exosomal proteins of breast milk
135782750 (itga6a)
Cell adhesion molecules [BR:
pdab04515
]
Integrins
Integrin alpha subunits
135782750 (itga6a)
CD molecules [BR:
pdab04090
]
Proteins
135782750 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
NDT80_PhoG
Motif
Other DBs
NCBI-GeneID:
135782750
NCBI-ProteinID:
XP_065149313
LinkDB
All DBs
Position
15:34984201..35015304
Genome browser
AA seq
1090 aa
AA seq
DB search
MEVLSFNLWWIFTLLLWTSASAFNLDTQNVLRKNGEPGSLFGFSLALHRQLQPTDKRILL
IGAPKAKALSNQNANITGGLYSCDITTHPNDCTRVEFDNDVDVQVENKENQWMGVTVQSQ
GPGGKIVTCAHRYQRLLFANTAQEARDITGRCYMLSQDLSIDSQSDEDGGNWKFCDGRTR
GHERFGVCQQGLAATFTKDYHYVIFGAPGAYNWRGVVRAEQKNNTLLDMGMYDDGPYEVG
DENRLDPHLVPVPANSYLGFSLDSGHSITEKGKLIIVSGAPRANHSGAVVFLQKESEIST
MLAAEHILEGPGLGSSFGYDVAVVDLNGDGWQDVVVGAPQFFQRDEEVGGAVFVYINKAG
RWKDVSAIRLNGTKDSMFGLTVENIGDINLDSFEDIAVGAPYADSGFGCVYIYHGSADGI
NTKPAQILEGRQHNIKMFGYSLAGNMDLDHNSYPDLAVGSLSDAVFIYRSKSVVSIKTDV
KVTPKEIDLMKKTCGNSICLTVEACFSYRANPTTYNPKLTIGYTIEAEWYRRKLGLTSRV
VFLEKSETDQEFQSSGTLELRGQNKKACYKTQLKLKEAIKDKLRAVPIEVFVAIQSAKRG
KRQSSLPQLVPILDSTVPNRTITEVNFLKEGCGTDNICQSNLKLQYRFCFRETNQDVFPP
LPLENGVPVVSLSDQKDIALEVTVGNRGGDDAHEAKLLAHFDESLSYSGFRSLRTTDKHV
ICAANQNGSLADCELGNPFKRDSEVTFYIILSTGKISLDTKEIEIELQLETTSLQEGMSK
VKAKAKVIIELLLSVQGLAKPSQVYFGGKVKGESAMKSEEDIGNLIEYEFRVINLGKPLK
SFGTASLNIQWPRDSSMGKWLLYLMKINTRDLQLVTCSPEKEINPLRLNEESTSTRTKRE
LGERKVSEASKISLFADKRKHRTLSCAGDAKCVEIRCPLQGLDSSAVIILKSRLWNSTFL
EDYSNYNYLDIMVKASISLDVSATNIVLKNPETQVRLTVFPEATVTPFGGVPWWIILVAV
LAGILMLALLVLLLWKCGFFKRSKYEDSVPKYNAVRIRKETRLLKDGEVMLDPLEKKQWM
TSWSENESYS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggaggtactttcttttaatctgtggtggatttttacattgcttttatggacgtctgcg
agcgcgtttaacctggacactcaaaacgtcctgaggaagaatggtgaacccggtagcctc
ttcggtttctctctggctttgcaccggcagcttcaacctaccgataaaagaatattgttg
attggtgctcccaaggccaaggctttatccaatcagaatgcaaacatcaccggtgggctg
tacagctgtgacatcacaacccatcccaatgattgtacacgggtggagtttgacaatgat
gtggatgttcaggtggagaataaggagaaccagtggatgggtgtaactgttcagagtcag
ggacctggaggcaaaattgtgacatgtgcccatcgttaccagcgcttgttgtttgcaaac
acagcccaagaggcgcgtgacatcactggacgctgttatatgctcagtcaggatctcagc
attgacagccaatcagatgaggatggtgggaactggaaattttgtgacggacgcaccagg
ggtcatgaaaggttcggggtctgtcagcagggcctggctgccaccttcactaaagattat
cattatgtcatcttcggagcaccgggagcttacaactggagaggtgtagtgcgtgctgag
cagaagaacaacacactgctggatatgggcatgtatgatgatggtccctatgaggtcggg
gatgaaaatcgcctagatccacatctagtgccagtaccagccaacagttacttgggattc
tctctggattctggtcacagcatcacagagaaaggaaagctcatcattgtgtcaggagcg
ccgagagccaatcacagtggagcggtggtgtttttgcagaaggaaagtgaaatctccacc
atgcttgcagctgaacacatactagaaggaccaggccttggatcatcatttggatacgat
gtcgcggtggtggacctgaatggtgatggttggcaggatgtcgtggtcggagcgccgcag
ttcttccaaagagatgaggaagtgggcggggctgtatttgtttatatcaataaagctgga
agatggaaggacgtcagtgctattcgcctgaatggaactaaagattcaatgtttggactg
actgtagagaacattggagacattaacctggattcttttgaagatattgctgtaggcgcc
ccatatgctgactcagggtttggttgtgtttacatctaccacggatctgctgacggcatc
aatactaaaccagctcagatactggagggcaggcaacacaacattaagatgtttggctat
tctctggctggaaatatggacctggatcataactcgtatcctgatcttgctgtgggctct
ctctctgatgcagttttcatatacaggtccaaatcggttgttagcatcaagacagacgtc
aaggtcacaccaaaggaaattgacttgatgaagaaaacgtgtggtaacagtatttgcttg
actgttgaggcttgtttctcgtacagagcaaaccccaccacctacaacccaaaactcaca
attggctacacaattgaagcagagtggtaccgcagaaagcttgggctcacatccagagtt
gtgttcctagagaagagcgagacggatcaggagttccagtcatctggtactttggagcta
cgaggacagaataagaaagcgtgttacaagacccaactgaaactaaaggaagccatcaaa
gataagctgagagcagttcctatcgaggtctttgtggccattcagagtgctaagagaggc
aaaaggcagagctccctgccacaactcgtgccaatactggactccactgtgcctaacagg
accattacagaggtcaactttctgaaggagggctgtggcactgataacatctgtcagagt
aacttaaaactgcagtatagattctgcttcagagagacgaaccaggacgtcttccctcca
ctgccgctagaaaacggcgttccagtggtgtctttaagcgatcagaaggacattgctctg
gaggtcacggtggggaacaggggcggagatgatgctcatgaagccaaactgctggcacac
tttgatgaatctctgtcatactctggattcagatctctgagaactacagataagcatgtg
atctgtgcggccaatcagaatggatctctggccgactgtgagctgggaaacccatttaaa
cgtgattcagaggtaacgttttatatcatactgagcactggcaagatttcactcgacacc
aaagagattgagattgaacttcagctggaaacaacgagtttacaggagggaatgagcaaa
gtgaaggcaaaagccaaggtgatcattgaacttctgctgtctgtgcaagggttggccaaa
ccatctcaggtctattttggtggtaaagtcaaaggcgagagtgccatgaagtcagaggag
gacattgggaacttgatcgaatatgaattcagagtgatcaacttgggaaagccgctgaag
tcttttggaactgcttctctaaatatccagtggcccagagacagctcgatgggaaaatgg
ctgctgtatctgatgaagatcaacaccagagacttacagttagtcacatgttcacctgag
aaagagattaaccctctcagactgaatgaggagtcgacatccaccagaacaaaacgagag
cttggggagaggaaagtgtctgaagcgagtaaaatatctctcttcgctgacaaacgcaag
cataggacgctgtcgtgcgcaggagatgccaaatgtgtggagatcagatgccctctacag
ggcctggacagcagtgcggtcatcattttaaaatcacgcctgtggaattcaacttttctt
gaagattattctaactacaattaccttgatataatggtgaaggcttctataagtctggat
gtttctgcaacaaacattgtgctgaaaaacccagagacacaggtgagactgaccgtgttt
ccagaggcgacagtgactccgtttggaggcgttccttggtggatcattctcgtggccgta
ttagctggaattctaatgctggctcttctggttctgttactctggaagtgtggatttttc
aaacgctccaaatatgaagacagcgtaccgaaatataatgcagtgaggattcgtaaggag
acgcgtctcttgaaagatggagaggtcatgttagatcccttggagaagaagcagtggatg
acctcatggagcgagaacgagagttactcttga
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integrated database retrieval system
