Paramisgurnus dabryanus (large-scale loach): 135782858
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Entry
135782858 CDS
T10799
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdab01009
]
135782858 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdab03021
]
135782858 (ctdp1)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
135782858 (ctdp1)
Protein phosphatases and associated proteins [BR:
pdab01009
]
HAD phosphatases
Fcp/Scp phosphatases
135782858 (ctdp1)
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
135782858 (ctdp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
135782858
NCBI-ProteinID:
XP_065149425
LinkDB
All DBs
Position
19:22458440..22600401
Genome browser
AA seq
943 aa
AA seq
DB search
MEEPADSGGGAAAEGPVVQVTEIRWPLGARPLRLLEWKVKPGTLVNVDSVIAVCAPIPTE
SEPRAPERKLKSDRTGVVRELCCQLGQVIAPGGVIAKVEECSHPIVMKGLCAECGQDLTQ
LQSKNGKQHAPVSTATVSMVHSVPELMVSSEQAEQLGREDQHRLHRNRKLVLMVDLDQTL
IHTTEQPCQRMSNRGIFHFQLGRGEPMLHTRFRPHCKEFLEKIAKLYELHVFTFGSRLYA
HTIAGFLDPEKKLFSHRIMSRDECIDPYSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPN
LITVKKYIYFQGTGDINAPPGSREAQMSRKPAGSQAGRPAENVESSSTSGQEEQRNGLRK
SSKDRKAGHEDSSSSSASATQGPSANERTHPTGEQPNESSDNTDKYNVKAEGEASSGVTE
MPNAAPDSTSNDLEFDLSSDSDNEEDKTGLSDSDGEKRTVEAGKRKQAKLDSKSKEDDEN
GGKQRTEVGDLPDTDLEGLGDLGNGCSDKKEVETESQNSEQSGVTMGEESLDHSMEDEDD
EEEEDTDQDDHLIYLEGVLVRIHTEYYSRYEALPQKESSEMPDIRKIAPELKGRTLAGTT
IAFSGLYPSNYPMERTREWYHAKALGAKVGKTLVVDAKDPNRTTHLIAARLGTEKVRQAL
GCKHLHVVNPDWLWSCLERWERVEEQLFPLREDYNKSHRSSSPGTFPDVQGSVPRPLFQP
LPVQHKSPPAPEMRTYDHVTGKLIRRGPQASRPPSYLHSHGSSMSLQAQGDLSTLRLGQG
SQQQDGGGGSSRDNEQPGPSRRKRQPSMSESMPLYTLCKEDLDSMDKEVDDILGEESDNE
SEEKGKDEKMEEEEPHTSSQRGPSSDNMRTLGVVVEEAAQKSTSAEVRVSESAPRGHKRK
LEAGEDNDEDGESSKDSNEDEEGSSSEADEMAAALEAELNDFM
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcctgcagactctggcggcggtgcggcagcagagggccccgtggttcaggta
acggagatccgatggcccttaggagcgcgtcctctgcggctgcttgagtggaaggtgaag
cccggaactctggtaaacgttgactccgtcatcgccgtatgcgcaccgattcctaccgag
agtgagccgcgagcgcccgagaggaagctgaagtcggatcgcacaggagtcgtgcgggaa
ctctgctgtcaacttgggcaggtcatagcgcctgggggtgtcatagcaaaagtggaagaa
tgcagccatcccatagtgatgaagggcctttgtgcagaatgtggccaggacttaactcag
ctacagagcaagaatggaaagcagcacgctcccgtctccacagcgaccgtttccatggta
cacagcgttccagaactgatggtcagctcagagcaagcagagcagcttggccgagaggac
cagcatagacttcacaggaacaggaagctggtgctgatggtggatctggaccagacgctg
atccacaccactgaacagccctgtcagcgcatgtccaacaggggaatctttcatttccag
cttggacgtggagaaccaatgcttcacacgcgattcaggcctcactgcaaagagtttcta
gagaagatcgccaaactttatgagctgcatgtcttcaccttcggcagccgtttatatgct
cacaccatcgcaggcttcttggatcccgagaagaagctcttctctcacagaatcatgtct
agagatgaatgcatagacccctactctaagacgggcaacctcagaaatttgtttccctgc
ggagactctatggtgtgcattatagatgatagagaggatgtgtggaagtttgcccccaac
ctcatcacagtgaaaaaatacatctacttccaaggcacgggggacatcaacgccccgccg
ggctcacgggaggctcagatgtccagaaaacctgcaggtagccaggctggacggcctgca
gagaacgtggagtcttctagtacatcaggacaggaggaacaaagaaacgggctcaggaaa
tccagcaaggatcgaaaagctgggcacgaggattcgtcatcgtcctctgccagcgccact
cagggaccttcagccaatgagaggactcaccccactggggaacagcccaatgagagttca
gataatactgacaagtataatgtgaaagcggagggggaggccagctcaggtgtgactgag
atgccaaatgccgctcctgacagcacctccaatgacctggagtttgacctctcaagtgac
agtgacaacgaagaggataaaacgggattatcagacagcgatggtgaaaaacggacggta
gaggctgggaaacgcaaacaggcaaaattggattctaagagcaaagaggatgatgaaaac
gggggtaaacaaaggacagaagtgggagatcttccagacaccgatctggaaggacttggt
gatttagggaacggctgttctgataagaaggaggtggaaacagagtcacaaaacagtgag
cagtcaggtgtcaccatgggggaggagtctttagaccacagcatggaggatgaggatgat
gaggaagaggaagacaccgaccaagacgaccacctcatttatctcgagggggtgttggtt
cgcatccacacggagtattactcacgctacgaggccttacctcaaaaagagagttcggaa
atgccagatatccggaaaatcgcccctgagctgaagggtcgtacgctggcgggcaccaca
atcgctttcagtggcctgtatccatccaattatccaatggagcgcacgcgagaatggtac
cacgccaaggcgctgggtgccaaggttggcaagaccctggtggtcgatgccaaagaccca
aaccgaaccacccatctcattgcagcacgtttaggcacagagaaagtgcgtcaggctctg
ggctgtaaacatcttcatgtggtgaatcctgattggctgtggagctgcctggaacgctgg
gagcgagtggaagaacaactctttcctctcagagaggactataacaaatcacacaggagc
agcagtcccggcacatttccagacgtccagggttctgtcccgaggcctctgttccagccc
cttcccgtccagcacaagtcgccgccagcgccagagatgcgaacctatgaccatgtcact
ggcaaactgattcgcaggggaccgcaggcctctcgccctccctcttatcttcactcgcat
ggatcctctatgtctctgcaagcacagggagatctgtccaccctcaggttaggtcagggg
tctcagcagcaggatgggggtggaggttcgagtcgcgacaatgagcagcccggaccctca
cggaggaaacgccagcccagtatgtctgagtccatgccactgtatacactctgcaaggag
gacctggacagcatggacaaagaggtggatgacatccttggggaagagagtgataatgaa
agtgaggaaaagggaaaagatgagaagatggaggaagaagaaccccacacaagcagtcag
agaggcccgtcatcagataacatgcggaccctgggcgttgttgttgaggaagcggctcaa
aagtcaaccagtgcagaagttcgtgtatcggagagcgcgcccagaggccacaaaaggaag
ctggaggccggagaagacaacgatgaagatggtgaatctagtaaagactccaatgaggat
gaggagggcagcagctcagaggctgatgagatggctgccgcactggaggcggagcttaat
gacttcatgtaa
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