Paramisgurnus dabryanus (large-scale loach): 135782991
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Entry
135782991 CDS
T10799
Symbol
capns1a
Name
(RefSeq) calpain small subunit 1a
KO
K08583
calpain, small subunit 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdab01002
]
135782991 (capns1a)
Peptidases and inhibitors [BR:
pdab01002
]
Cysteine peptidases
Family C2: calpain family
135782991 (capns1a)
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Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
EH
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
135782991
NCBI-ProteinID:
XP_065149593
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Position
5:complement(15166352..15174326)
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AA seq
216 aa
AA seq
DB search
MNLAKKLIGGLIDVVSNIDPNQFVPSEPPPPRRPLNYAQSNDTEEEKQFRKVFQQLAGED
MEVSPNELMNILNKIISKHSDLRTDGFSIESCRSMVAVMDSDSTGKLGFHEFKYLWNNIK
KWQAVYKSYDRDRSGTIGADELPGAFQAAGFPLNDQLFQMLIRRYSDENGDMDFDNYIGC
LVRLDAMCRAFKTLDKDNDGTIKVNIQEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgccaaaaaactcattggtggccttattgatgtggtcagcaacatcgaccct
aatcagtttgtgccctcagaacctccaccacctcgcagaccactgaattatgctcagtct
aatgacacagaggaagagaaacagttccgcaaagtatttcagcagctagctggcgaagat
atggaagtaagtcccaatgaactgatgaacattctcaacaaaatcatctccaaacatagt
gatctgaggacagatggcttcagcatcgagtcatgcagaagtatggtggctgtcatggat
agtgacagcacaggtaaactgggctttcacgagtttaaatacctctggaacaacatcaag
aaatggcaggcagtgtataagtcttatgacagggaccgttcaggaaccatcggagcagat
gagcttcccggagccttccaagctgcaggtttccctctgaacgatcagctctttcagatg
cttattcgcagatacagcgatgagaacggagacatggactttgacaattacattggctgt
cttgtgagacttgacgctatgtgtcgtgccttcaagactcttgacaaagacaatgatggc
acaatcaaggtcaatattcaggagtggctacagctgaccatgtactcctaa
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