Paramisgurnus dabryanus (large-scale loach): 135783631
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Entry
135783631 CDS
T10799
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04141
Protein processing in endoplasmic reticulum
pdab04210
Apoptosis
pdab04217
Necroptosis
pdab04218
Cellular senescence
pdab04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135783631 (capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
135783631 (capn1)
04217 Necroptosis
135783631 (capn1)
04218 Cellular senescence
135783631 (capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135783631 (capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdab01002
]
135783631 (capn1)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
135783631 (capn1)
Peptidases and inhibitors [BR:
pdab01002
]
Cysteine peptidases
Family C2: calpain family
135783631 (capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
135783631
NCBI-ProteinID:
XP_065150455
LinkDB
All DBs
Position
2:15519756..15585765
Genome browser
AA seq
704 aa
AA seq
DB search
MEPMFATGMAAKLRSVWDRNEGLGQNHNAVKFLGQDYESLRAQCLQNRTLFDDPSFPASG
TSLGFNELGPRSSKTYGVRWMRPTEICSRPQFIMDGATRTDICQGALGDCWLLAAIASLT
LNDNLLHRVVPHGQSFDNGYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLFVHSAEGGE
FWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMYELLKAPSDLFSIIGRAIERG
SLLGCSIDITSKFDMESVTFKKLVKGHAYSVTGVEEVLYRGNMTKLVRIRNPWGEVEWTG
PWSDNSREWDNVDSSVRGRLNNRSDDGEFWMSFSDFLREFTRLEICNLTADALQTNQLKK
WSSSLYQGEWRRGSTAGGCRNFPATFWINPQFKLALQNPDTSSHSDCSFLVALMQKDLRK
KRREGKDMETIGFAIYEVPKEFAGKSGVHLKRDFFLSNASSARSELFINLREVSSRFKLP
VGEYIIVPSTFEPNKEADFVLRVFSEKPANSEEMDDKVTADIPAEQHLDESQIDAGFKNL
FRQLAGADMEISVTELQTILNRIISKHKDLKTDGFGKEACRSMINLMDTDGSGKLGLTEF
HVLWEKIKRYLTIFRDHDLDKSGTMSSYEMRKALETAGFKLNNHLFQLIIIRYTEEDFTV
DFDNFVTCLVRLETMFKTFKTLDTDGDGIMSLTFFQWISLTMFA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatgtttgccaccggtatggctgcgaaactccggagtgtgtgggacagaaat
gaaggcttgggtcagaaccacaatgctgtgaagtttctgggacaggattatgagtcccta
agggctcagtgcctccagaacagaaccctgtttgatgacccatcgtttccagcctccggc
acttctctgggtttcaacgagttgggcccacgttcctctaagacgtatggtgtgcggtgg
atgaggccgacggagatttgctcgcgtcctcagtttatcatggatggagctactcgtact
gacatctgtcagggagctttaggtgactgttggttgctggcagccattgcgtctctgact
ctgaacgataacctccttcaccgcgtggtgcctcatgggcagagctttgacaatggctac
gctggaatcttccactttcagttttggcagttcggtgagtgggttgacgtggttattgat
gaccggttgcccgtgaaggatgggaagctgttgtttgtccactcagcagaaggtggagag
ttctggagtgccctactggagaaggcctatgccaagctaaacggctgttatgaggctctc
tcaggtggaagcacgtctgaggggtttgaggattttaccggtggggtgacagagatgtac
gagttattgaaagcaccgtctgacctcttcagcatcataggccgtgccatcgagagaggc
tcacttttgggctgctctatagatattaccagtaagtttgacatggagtcagtgaccttc
aaaaagctggtcaaaggtcatgcatactctgtgacaggagtggaggaggtactttacaga
ggaaacatgactaaactggtgcggatcagaaacccctggggtgaagtggagtggacagga
ccctggagcgacaactctcgagaatgggacaatgtggacagctccgttagaggcagatta
aacaaccgcagtgacgatggagagttctggatgtcattcagtgacttcttgcgagagttc
acccgattggagatctgcaatttgaccgcagatgcccttcagacgaatcagttgaagaaa
tggagctcatcactgtatcagggggagtggaggaggggcagcacagccggtggctgtaga
aacttcccagccacattctggatcaaccctcagttcaaattggccctacagaaccctgat
acttccagccattcagactgcagcttcctggtggcactgatgcaaaaagatctcaggaaa
aagcgaagagaaggaaaagacatggagactattggatttgccatttacgaggttccaaaa
gagtttgcaggtaaatcaggtgtacacctgaagcgagatttcttcctcagtaatgcgtcc
agtgcccgctcagaactcttcatcaacctgagagaggtgagctctcgtttcaaactgccg
gtgggggagtacatcatcgttccatccacctttgagccaaacaaagaggctgacttcgtc
ctcagagtattctcagaaaaacctgccaactcagaagaaatggatgataaagtcacagct
gacattcctgctgagcaacatctggacgagagtcaaattgatgctggctttaagaatctc
ttccgacagttagctggagcggacatggaaatcagtgtcacagagctgcagaccatactg
aacagaattatcagcaaacataaagatttgaagacagatggttttggtaaagaagcctgt
cgtagcatgatcaacctcatggatactgatgggagcgggaagctcggcctcacagagttc
catgtattgtgggaaaagattaaacgttatctgactatcttcagggatcatgatcttgat
aaatctggaactatgagctcttatgagatgcgaaaagccctggagacagcaggttttaag
ctgaacaatcatttattccagctgattatcattcgatacacagaggaagactttactgtg
gatttcgacaactttgtaacctgtttagtgcggttggagaccatgttcaaaaccttcaag
accctggacacagacggtgatggaattatgtcactcacattctttcagtggatttctttg
accatgtttgcctga
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